Cytoscape test4
From FANTOM5_SSTAR
Details
Transcriptome profiling
| hCAGE | {{{profile_hcage}}} |
|---|---|
| RNA-seq | {{{profile_rnaseq}}} |
| smallRNA seq | {{{profile_srnaseq}}} |
| nanoCAGEscan | {{{profile_cagescan}}} |
Sample info
| strain | {{{sample_strain}}} |
|---|---|
| tissue | {{{sample_tissue}}} |
| dev_stage | {{{sample_dev_stage}}} |
| sex | {{{sample_sex}}} |
| age | {{{sample_age}}} |
| ethnicity | {{{sample_ethnicity}}} |
| cell_type | {{{sample_cell_type}}} |
| cell_line | {{{sample_cell_line}}} |
| collaboration | {{{sample_collaboration}}} |
| Experimental condition | {{{sample_experimental_condition}}} |
| disease | {{{sample_disease}}} |
| cell_lot | {{{sample_cell_lot}}} |
| cell_catalog | {{{sample_cell_catalog}}} |
| company | {{{sample_company}}} |
| donor(cell lot) | {{{sample_donor(cell lot)}}} |
| Note | {{{sample_note}}} |
RNA info
| sample_id | {{{sample_id}}} |
|---|---|
| tube_id | {{{rna_tube_id}}} |
| box | {{{rna_box}}} |
| position | {{{rna_position}}} |
| lot_number | {{{rna_lot_number}}} |
| catalog_number | {{{rna_catalog_number}}} |
| RIN | {{{rna_rin}}} |
| OD260/230 | {{{rna_od260/230}}} |
| OD260/280 | {{{rna_od260/280}}} |
| sample_type | {{{rna_sample_type}}} |
| extraction_protocol | {{{rna_extraction_protocol}}} |
| weight_ug | {{{rna_weight_ug}}} |
| concentration | {{{rna_concentration}}} |
