Personal tools

MacroAPE 1083:CNhs12627 bu f2

From FANTOM5_SSTAR

Revision as of 12:09, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: CNhs12627_bu_f2

Motif matrix
POACGT
1244.9162345251208123.1041114424178376.9341634828308160.230676551938586
276.770102883418137.626035456160682117.92470299997731302.8643446627514
399.87553947769972182.98813483332822132.0142031483199590.30730854296029
42.03590891804967263.188299284114241.467304610705797238.4936731894383
50.0505.185186002307660.00.0
60.00.00.0505.18518600230766
70.00.0505.185186002307660.0
8168.721073517961862.914221948232327153.12417823364808180.42571230246585
921.9327087020017268.38933462903107270.559030041535204.30411262974025
10204.6605030425054139.57710108785395153.882409766107777.065172105840928
11113.1935080528394161.0862570747521560.35828028191716170.54714059279934

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

YJL103C#MA0427.100.007923313.7715111ATCCCTGTGATAGCTCCGGAGA+
RUNX1#MA0002.2-20.008460724.027319ATCCCTGTGATGTCTGTGGTTT+
OAF1#MA0348.110.009376874.4633918ATCCCTGTGATTATCTCCGA-
Hltf#MA0109.1-10.009792314.66114110ATCCCTGTGATAACCTTATAT+
EBF1#MA0154.1-10.01186045.64555110ATCCCTGTGATTCCCTTGGGT-
YDR520C#MA0422.120.01520297.2365818ATCCCTGTGATTTATCTCCGG-
MOT3#MA0340.1-10.01560017.4256416ATCCCTGTGATTACCTT-
YKL222C#MA0428.100.01761258.3835419ATCCCTGTGATATTTCCGTT-
MET28#MA0332.1-40.02027829.6524216ATCCCTGTGATCTGTGG+