Personal tools

MacroAPE 1083:GCTCCGCTC,motif508

From FANTOM5_SSTAR

Revision as of 12:27, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: GCTCCGCTC,motif508,CNhs10641,T:1575.0(45.43%),B:22609.8(35.63%),P:1e-31

Motif matrix
POACGT
163143.3251244.25124.425
264.5751327.72555.125127.575
3179.5592.925138.61163.925
485.051269.45140.17580.325
5111.8251200.15143.325119.7
6114.97588.21256.85114.975
7133.8751217.475102.375121.275
866.1566.15225.2251217.475
9118.1251135.575154.35166.95

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

CHA4#MA0283.100.002262061.0767418GCTCCGCTCTCTCCGCC-
RDR1#MA0360.100.003375561.6067718GCTCCGCTCGTTCCGCA-
Pax5#MA0014.120.003774071.7964619GCTCCGCTCCCGCTACGCTTCAGTGCTCT-
YML081W#MA0431.100.004772.2705219GCTCCGCTCACCCCGCAC+
HAL9#MA0311.1-10.006475313.0822515GCTCCGCTCTTCCG-
SUT1#MA0399.1-10.009093694.328617GCTCCGCTCCCCCGCG-
PDR8#MA0354.110.009640554.588917GCTCCGCTCATCTCCGT-
YBR239C#MA0420.100.009640554.588918GCTCCGCTCGTTCCGGT-
Klf4#MA0039.200.01297096.1741319GCTCCGCTCGCCCCACCCA-
STP2#MA0395.1100.01403366.6819GCTCCGCTCTCGTCGTGCGGCGCCGATCA-
SPIB#MA0081.1-10.01643237.8217917GCTCCGCTCTTCCTCT-
YKL222C#MA0428.110.01711998.1490718GCTCCGCTCATTTCCGTT-
IXR1#MA0323.1-10.01793458.5368318GCTCCGCTCCCCCGCTTCCGGCTT-