MacroAPE 1083:Motif GNGCTA
From FANTOM5_SSTAR
Full Name: motif_GNGCTA
| Motif matrix | |||||||||||||||||||||||||||||||||||
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Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
|---|---|---|---|---|---|---|---|---|
| STP4#MA0397.1 | 1 | 0.00161002 | 0.766371 | 0.640089 | 6 | GAGCTA | TGCGCTATC | - |
| SNT2#MA0384.1 | 2 | 0.00198031 | 0.942626 | 0.640089 | 6 | GAGCTA | CGGCGCTACCA | - |
| STP3#MA0396.1 | 1 | 0.00201709 | 0.960133 | 0.640089 | 6 | GAGCTA | TGCGCTAGC | - |
| STB5#MA0392.1 | 2 | 0.00359569 | 1.71155 | 0.855774 | 6 | GAGCTA | CGGTGTTA | + |
| odd#MA0454.1 | 0 | 0.0107047 | 5.09544 | 1 | 6 | GAGCTA | CTGCTACTGTT | - |
| RTG3#MA0376.1 | 10 | 0.0201478 | 9.59034 | 1 | 6 | GAGCTA | GACTAAGCACGTGCTAATAT | - |
