Personal tools

MacroAPE 1083:8-TCGGAGT

From FANTOM5_SSTAR

Revision as of 14:42, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: 8-TCGGAGT,CNhs12321,BestGuess:MECP2_f1_HM09(0.592917130005684),T:2642.0(63.37%),B:24125.2(54.78%),P:1e-28

Motif matrix
POACGT
1140.0262.642821.6621677.67
2153.2362221.9222.642264.2
32.6422.6422449.134187.582
4118.89747.6861772.7822.642
52634.0742.6422.6422.642
6626.154198.151305.148512.548
7565.388285.3362.6421788.634

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

YLR278C#MA0430.100.0001720440.08189270.1379827TCGGAGTCCGGAGTT+
SUT2#MA0400.160.00029180.1388970.1379827TCGGAGTAAATTTTCGGAGTTTATCAT-
YNR063W#MA0432.100.0006065760.288730.1912197TCGGAGTTCGGAGAT+
YDR520C#MA0422.100.0008669860.4126850.1929337TCGGAGTCCGGAGATAA+
HAL9#MA0311.1-10.00112310.5345940.1929335TCGGAGTCGGAA+
HAP1#MA0312.1-10.001224030.5826370.1929336TCGGAGTCGGAGATA+
CHA4#MA0283.110.002102171.000630.2549037TCGGAGTGGCGGAGA+
OAF1#MA0348.100.002286441.088350.2549037TCGGAGTTCGGAGATA+
RGT1#MA0367.100.002425781.154670.2549037TCGGAGTCCGGAAAAACT-
CEP3#MA0282.110.004327582.059930.403477TCGGAGTCTCGGAAA+
STB4#MA0391.110.004692862.23380.403476TCGGAGTCTCGGAA+
YPR196W#MA0437.1-10.006331293.013690.4989736TCGGAGTCGGAGAAAT-
STB5#MA0392.1-10.008296873.949310.6035846TCGGAGTCGGTGTTA+
YRR1#MA0439.100.009810654.669870.614667TCGGAGTGCGGAGATAAG-
SIP4#MA0380.110.009927064.725280.614666TCGGAGTTCCGGAG-
LYS14#MA0325.100.01039894.949890.614667TCGGAGTCCGGAATT+
PDR8#MA0354.100.01287616.129020.7163117TCGGAGTGCGGAGAT+
YKL222C#MA0428.110.01559727.424260.8194847TCGGAGTAACGGAAAT+
YBR239C#MA0420.110.0174598.31050.8690267TCGGAGTACCGGAAC+