MacroAPE 1083:5-SBGTYRTYWGRS
From FANTOM5_SSTAR
Full Name: 5-SBGTYRTYWGRS,CNhs12593,BestGuess:RFX1_f1_HM09(0.656185092251034),T:1285.0(42.56%),B:13939.4(30.84%),P:1e-41
| Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
|---|---|---|---|---|---|---|---|---|
| ABF1#MA0265.1 | 0 | 0.00025563 | 0.12168 | 0.24231 | 12 | GGGTTATTAGGG | ATATCACTTTATACGA | - |
| BRCA1#MA0133.1 | 0 | 0.000557638 | 0.265436 | 0.24231 | 7 | GGGTTATTAGGG | GTGTTGT | - |
| RFX1#MA0365.1 | -1 | 0.000763774 | 0.363557 | 0.24231 | 8 | GGGTTATTAGGG | GGTTGCTA | + |
| Gamyb#MA0034.1 | 2 | 0.00191712 | 0.912547 | 0.395766 | 8 | GGGTTATTAGGG | GGCGGTTGTC | - |
| Gata1#MA0035.2 | 0 | 0.00207913 | 0.989665 | 0.395766 | 11 | GGGTTATTAGGG | TTCTTATCTGT | - |
| Pax4#MA0068.1 | 3 | 0.00673212 | 3.20449 | 0.999747 | 12 | GGGTTATTAGGG | GGGGGGGGAGTGGAGTATTGGAAATTTTTC | - |
| ESR1#MA0112.2 | 6 | 0.0088172 | 4.19699 | 0.999747 | 12 | GGGTTATTAGGG | AGGTCAGGGTGACCTGGGCC | - |
| GSM1#MA0308.1 | 9 | 0.0131374 | 6.25339 | 0.999747 | 12 | GGGTTATTAGGG | TATACTCCGGAGTTTTTTAAT | - |
| CREB1#MA0018.1 | 1 | 0.0137987 | 6.56818 | 0.999747 | 11 | GGGTTATTAGGG | GACGTCACCAGG | - |
| myb.Ph3#MA0054.1 | 3 | 0.0165121 | 7.85977 | 0.999747 | 6 | GGGTTATTAGGG | TAACCGTTT | + |
| caup#MA0217.1 | -1 | 0.0203669 | 9.69463 | 0.999747 | 5 | GGGTTATTAGGG | TGTTA | - |
