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MacroAPE 1083:5-SBGTYRTYWGRS

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Full Name: 5-SBGTYRTYWGRS,CNhs12593,BestGuess:RFX1_f1_HM09(0.656185092251034),T:1285.0(42.56%),B:13939.4(30.84%),P:1e-41

Motif matrix
POACGT
1182.47444.61457.46200.46
21.285381.645457.46444.61
31.2851.285989.45292.98
4313.541.2851.285968.89
51.285553.8351.285728.595
6567.971.285426.62289.125
71.285531.991.285750.44
81.285576.9652.57704.18
9588.5380.955115.65498.58
10257.0322.535516.57188.895
11402.205179.9451.035250.575
1295.09456.175602.665132.355

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

ABF1#MA0265.100.000255630.121680.2423112GGGTTATTAGGGATATCACTTTATACGA-
BRCA1#MA0133.100.0005576380.2654360.242317GGGTTATTAGGGGTGTTGT-
RFX1#MA0365.1-10.0007637740.3635570.242318GGGTTATTAGGGGGTTGCTA+
Gamyb#MA0034.120.001917120.9125470.3957668GGGTTATTAGGGGGCGGTTGTC-
Gata1#MA0035.200.002079130.9896650.39576611GGGTTATTAGGGTTCTTATCTGT-
Pax4#MA0068.130.006732123.204490.99974712GGGTTATTAGGGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
ESR1#MA0112.260.00881724.196990.99974712GGGTTATTAGGGAGGTCAGGGTGACCTGGGCC-
GSM1#MA0308.190.01313746.253390.99974712GGGTTATTAGGGTATACTCCGGAGTTTTTTAAT-
CREB1#MA0018.110.01379876.568180.99974711GGGTTATTAGGGGACGTCACCAGG-
myb.Ph3#MA0054.130.01651217.859770.9997476GGGTTATTAGGGTAACCGTTT+
caup#MA0217.1-10.02036699.694630.9997475GGGTTATTAGGGTGTTA-