Personal tools

MacroAPE 1083:Motif CCCTNA

From FANTOM5_SSTAR

Revision as of 14:48, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: motif_CCCTNA

Motif matrix
POACGT
0104400
0204400
0304400
0400044
0500440
0644000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

REI1#MA0364.115.20154e-050.02475930.03434316CCCTGACCCCTGA+
USV1#MA0413.177.23203e-050.03442450.03434316CCCTGAAAATTCCCCCTGAATTTGTG+
INSM1#MA0155.140.0008284460.394340.2622726CCCTGACGCCCCCTGACA-
ESR1#MA0112.2110.001964690.9351930.4664916CCCTGAGGCCCAGGTCACCCTGACCT+
NRG1#MA0347.190.003165571.506810.5502676CCCTGATGCGATGGACCCTGATCTAG-
RPH1#MA0372.120.003476291.654710.5502676CCCTGAACCCCTAA+
RDS2#MA0362.100.004419092.103490.5995756CCCTGACCCCGAG-
GIS1#MA0306.120.005443982.591330.6463016CCCTGAACCCCTAAA+
TBF1#MA0403.120.009749194.640610.9976356CCCTGAAACCCTAA+
ESR2#MA0258.170.01228395.847140.9976356CCCTGACAGGTCACCGTGACCTTG-
ZAP1#MA0440.150.0148427.064780.9976356CCCTGACATGACCTTTAAGGT-
ESR1#MA0112.280.01693988.063360.9976356CCCTGACCAGGTCACCGTGACCCC+
usp#MA0016.100.01874068.920540.9976356CCCTGACCGTGACCCC-
HAP4#MA0315.140.01979199.420960.9976356CCCTGATCGCCTCTGATTGGT-