Personal tools

MacroAPE 1083:CEBPB ThioMac-CEBPb-ChIP-Seq/Homer

From FANTOM5_SSTAR

Revision as of 14:49, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: CEBPB_ThioMac-CEBPb-ChIP-Seq/Homer

Motif matrix
POACGT
1284491232962756
2455115693492196
315710599582
4441109033324
5370729106062
679448111487385
73910974910
8618850310677
99778101010
109681881029

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

mab-3#MA0262.100.0007614460.3624480.72489610GATGTTGCAAAATGTTGCGAATT+
CEBPA#MA0102.2-20.002219781.056610.8610748GATGTTGCAATTTCGCAAT+
Cebpa#MA0102.100.005018822.388960.86107410GATGTTGCAAGAGATTGCGAAA-
Pou5f1#MA0142.130.005422162.580950.86107410GATGTTGCAACTTTGTTATGCAAAT+
RFX1#MA0365.1-20.006134272.919910.8610748GATGTTGCAAGGTTGCTA+
STE12#MA0393.1-20.006660413.170360.8610747GATGTTGCAATGTTTCA-
Ddit3::Cebpa#MA0019.1-20.007457163.549610.8610748GATGTTGCAAAGATGCAATCCC+
Sox2#MA0143.140.00814043.874830.86107410GATGTTGCAACCTTTGTTATGCAAA+
BRCA1#MA0133.1-10.01632877.7724517GATGTTGCAAGTGTTGT-
slbo#MA0244.1-30.02022229.6257517GATGTTGCAATTTGCAAT-
HLF#MA0043.100.02046859.74299110GATGTTGCAAGGTTACGCAATT+