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NonredundantMotifs:28

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :known28
  • db :SWISSREGULON
  • Id :DMAP1_NCOR(1,2)_SMARC.p2
  • name  :
  • score :0.2074314320749557
  • External refs:
  • Internal refs:


Motif matrix
POACGT
166.1829948.5513442.003484282.864563999999
250.1184931.767241170.113212137.60344
393.88782400000011.98283679.616861184.114865
40.561712296.7790550.73148261.530137
5155.45663219.389437177.7907956.965522
61.25701335.383744317.7931589999995.16847
70.44510800359.157278
8000359.602386

Sub Motif Members