NonredundantMotifs:208

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known208
• db :UNIPROBE
• Id :Atf1_secondary
• name :SCI09
• score :0.0583472460647591
  
• External refs:

EntrezGene:466
UniProt:466

• Internal refs:

EntrezGene:466

Motif matrix

P0 A C G T 1 0.19087109961234 0.208589846553343 0.418110986529497 0.18242806730482 2 0.317846045706655 0.1116689961018 0.286305586762104 0.28417937142944 3 0.648957608714369 0.110707324053762 0.203307027434418 0.0370280397974514 4 0.0369311359958521 0.0518841012886246 0.0465111890757494 0.864673573639774 5 0.0838314198147913 0.0471403292420458 0.807373504828836 0.0616547461143271 6 0.825537283101291 0.0408135271679518 0.0655016971062335 0.0681474926245234 7 0.0362293346977887 0.860338884743481 0.0490318085280631 0.0543999720306671 8 0.158666998571068 0.0265821365219747 0.782381517597413 0.0323693473095441 9 0.564583962329619 0.233980620660121 0.0837897822408393 0.117645634769421 10 0.39892861041386 0.0208412657798149 0.349286051369993 0.230944072436332 11 0.0183567215919035 0.259285763790638 0.208353400471036 0.514004114146423 12 0.691639877818751 0.0687107994766941 0.0993936421148 0.140255680589755 13 0.455948201263195 0.106302466030573 0.180731922712279 0.257017409993953 14 0.257718776679461 0.300244015064166 0.204520349061019 0.237516859195354