NonredundantMotifs:23

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known23
• db :HOCOMOCO
• Id :AP2D_f1
• name  :
• score :4.056188375367438
  
• External refs:

EntrezGene:83741
UniProt:83741

• Internal refs:

EntrezGene:83741

Motif matrix

P0 A C G T 1 1.16279069767442 2.44186046511628 1.16279069767442 0.23255813953488352 2 0.0 0.0 5.0 0.0 3 0.0 3.1395348837209305 0.930232558139535 0.930232558139535 4 0.0 5.0 0.0 0.0 5 0.0 3.0232558139534897 0.0 1.9767441860465098 6 0.0 0.0 5.0 0.0 7 1.9767441860465098 1.16279069767442 1.86046511627907 0.0 8 0.0 0.0 5.0 0.0 9 0.0 0.0 5.0 0.0 10 0.0 4.069767441860465 0.930232558139535 0.0 11 0.930232558139535 1.16279069767442 1.9767441860465098 0.930232558139535 12 0.0 4.069767441860465 0.930232558139535 0.0 13 0.0 0.930232558139535 4.069767441860465 0.0 14 0.23255813953488352 1.16279069767442 0.23255813953488352 3.372093023255815