NonredundantMotifs:33

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known33
• db :UNIPROBE
• Id :Ascl2_secondary
• name :SCI09
• score :3.3437027120298133
  
• External refs:

EntrezGene:430
UniProt:430

• Internal refs:

EntrezGene:430

Motif matrix

P0 A C G T 1 0.114461549089786 0.345602359480712 0.289353230115255 0.250582861314247 2 0.192593287280278 0.25084449306752 0.116249624289927 0.440312595362275 3 0.338837829775925 0.304929261569313 0.195842542660874 0.160390365993888 4 0.312050850750647 0.115094331804079 0.162464735073906 0.410390082371368 5 0.143974706097306 0.600491735865346 0.123348444974066 0.132185113063283 6 0.0787505509789436 0.715072296499343 0.135182198816251 0.0709949537054629 7 0.146190741113154 0.685571209381871 0.0697987838749943 0.0984392656299799 8 0.137287160991388 0.646077925711715 0.126428373195834 0.0902065401010639 9 0.335099485079304 0.092260135908066 0.371509553068663 0.201130825943967 10 0.0330897683707383 0.631176315968281 0.0742775759527978 0.261456339708183 11 0.117515920775723 0.61933603047287 0.100945801616778 0.16220224713463 12 0.114768535685947 0.627362280511385 0.089838663325904 0.168030520476764 13 0.195787120472725 0.252056868434976 0.220803412375946 0.331352598716354 14 0.415354533744615 0.120731214471652 0.281372401522544 0.182541850261189 15 0.111178497182706 0.21707870954717 0.245769053622707 0.425973739647418 16 0.191516791851432 0.296951942197243 0.153369544849602 0.358161721101723