EntrezGene:99982

Symbol:	Kdm1a
Description:	lysine (K)-specific demethylase 1A
Synonyms:	1810043O07Rik, AA408884, Aof2, D4Ertd478e, Kdm1, Lsd1, mKIAA0601
Species:	Mouse (Mus musculus)
Xrefs:	EntrezGene:99982 MGI:1196256 Ensembl:ENSMUSG00000036940 Vega:OTTMUSG00000009707
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

---

Mm9::chr4:136158492..136158517,-	p4@Kdm1a
Mm9::chr4:136158524..136158531,-	p8@Kdm1a
Mm9::chr4:136158534..136158549,-	p3@Kdm1a
Mm9::chr4:136158556..136158675,-	p1@Kdm1a
Mm9::chr4:136158691..136158713,-	p2@Kdm1a

View on UCSC genome browser

---

Mouse over to see Genome browser image, Click image to go to Genome browser

TSS expression

---

Sample	p1@Kdm1a	p2@Kdm1a	p3@Kdm1a	p4@Kdm1a
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	16.75	2.44	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	16.38	0.91	0.45	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	29.34	1.51	0.00	0.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	25.55	2.50	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	25.35	3.36	0.00	0.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	19.39	2.34	0.00	0.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	18.72	6.97	0.26	0.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	61.95	2.25	0.84	0.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	38.85	1.64	0.23	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	32.02	2.91	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	25.93	3.51	0.00	0.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	23.97	6.33	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	21.94	3.85	0.09	0.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	18.65	6.33	0.00	0.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	17.41	5.06	0.00	0.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	17.49	1.40	0.00	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	19.09	5.68	0.00	0.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	24.41	5.76	0.00	0.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	20.80	7.21	0.00	0.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	34.36	3.57	3.23	6.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	22.54	9.53	0.00	0.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	20.37	7.57	0.00	0.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	14.08	1.28	0.00	0.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	11.70	2.98	0.00	0.00
GP2+ M cell, pool1.CNhs13228.11845-124H9	14.93	0.57	0.57	0.57
GP2+ M cell, pool2.CNhs13231.11846-124I1	13.78	1.72	0.00	0.00
GP2+ M cell, pool3.CNhs13240.11847-124I2	18.96	1.51	0.22	0.22
Ileum epithelium, pool1.CNhs13199.10252-104B9	16.15	0.57	0.00	0.00
Ileum epithelium, pool2.CNhs13232.10253-104C1	16.13	1.76	0.25	0.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	18.18	3.55	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	21.59	5.72	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	17.84	3.69	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	21.95	2.89	0.00	0.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	19.28	5.98	0.00	0.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	17.35	5.92	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	16.32	4.60	0.42	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	16.41	0.78	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	16.23	2.62	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	15.88	2.94	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	13.66	4.10	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	15.05	6.80	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	10.83	1.76	0.00	0.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	10.24	2.13	0.00	0.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	14.32	2.20	0.00	0.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	15.65	3.13	0.00	0.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	23.33	3.71	0.22	0.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	20.43	2.20	0.22	0.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	21.97	4.86	0.00	0.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	21.42	4.90	0.00	0.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	14.38	1.44	0.00	0.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	26.51	5.54	0.17	0.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	33.37	7.98	0.00	0.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	36.97	6.39	0.00	0.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	21.87	4.63	0.00	0.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	22.35	6.88	0.00	0.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	28.36	4.64	0.00	0.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3	78.90	7.69	0.20	0.61
Mouse Granule cells, donor2.CNhs12357.11731-123E3	71.41	8.99	0.00	0.00
Mouse Granule cells, donor3.CNhs12108.11636-122C7	64.02	11.41	0.00	0.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	12.54	3.05	0.00	0.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	10.67	7.11	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	13.05	1.35	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	10.88	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	9.95	2.84	0.00	0.00
Mouse Microglia, donor1.CNhs12629.11718-123C8	20.07	3.00	0.00	0.00
Mouse Microglia, donor2.CNhs12634.11736-123E8	29.20	1.92	0.00	0.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	105.87	12.13	0.83	0.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	105.98	10.80	0.27	0.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	101.17	10.52	0.21	1.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	32.85	6.28	0.00	0.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	30.48	4.20	0.00	0.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	84.76	11.64	0.24	0.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	121.15	10.73	0.19	0.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	87.33	8.27	0.00	0.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	28.63	3.30	0.00	0.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	30.52	2.55	0.00	0.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	28.57	4.61	0.15	0.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	73.59	6.86	0.13	0.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	97.43	8.69	0.55	0.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	75.01	10.94	0.00	0.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	22.89	4.47	0.00	0.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	25.89	3.94	0.00	0.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	31.93	5.96	0.15	0.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	37.12	2.36	0.00	0.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	41.71	5.55	0.28	0.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	58.34	6.52	0.19	0.19
Mouse Schwann, donor1.CNhs12507.11728-123D9	32.56	3.48	0.08	0.15
Mouse Schwann, donor2.CNhs12573.11746-123F9	28.64	4.31	0.00	0.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	16.23	3.77	0.00	0.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	5.16	2.58	0.00	0.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	9.52	0.68	0.00	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	4.86	1.08	0.00	0.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	9.10	2.60	0.00	0.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	4.93	2.24	0.00	0.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	13.76	2.81	0.42	0.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	15.34	3.75	0.00	0.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	12.47	2.34	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	13.78	2.12	0.00	0.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	46.90	9.01	0.56	0.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	37.21	2.57	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	58.61	7.64	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	64.00	7.11	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	28.36	5.41	0.22	0.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	35.98	5.32	1.27	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	24.77	1.52	0.00	0.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	19.75	3.20	0.23	0.80
accessory axillary lymph node, adult.CNhs10475.1063-29H9	17.09	6.73	0.00	0.00
adrenal gland, adult.CNhs10508.49-24D7	16.77	4.30	0.00	0.00
adrenal gland, embryo E14.CNhs11038.406-44C5	30.53	7.11	0.35	0.00
adrenal gland, embryo E16.CNhs11004.1254-43D6	22.23	4.57	0.30	0.00
adrenal gland, embryo E17.CNhs11043.1263-45I1	20.06	4.61	0.00	0.00
adrenal gland, embryo E18.CNhs11026.1262-18F5	22.31	4.67	0.00	0.00
adrenal gland, neonate N00.CNhs11191.1311-23C1	22.58	6.47	0.35	0.24
adrenal gland, neonate N25.CNhs11223.1377-27I3	17.97	4.90	0.00	0.00
amnion, adult pregnant day17.5.CNhs10488.583-22A8	44.25	10.38	0.00	0.25
aorta, adult.CNhs10498.46-23H1	13.74	3.04	0.00	0.00
bone (os femoris), adult.CNhs10483.56-12G2	17.69	6.19	0.00	0.00
bone (os femoris), neonate N02.CNhs11227.1985-43F5	28.63	5.01	0.00	0.00
bone (os femoris), neonate N16.CNhs11225.1525-43A6	24.29	5.74	0.22	0.00
bone (os femoris), neonate N20.CNhs11195.1350-25C3	16.49	5.82	0.48	0.00
cecum, adult.CNhs10467.37-13H4	20.50	0.00	0.00	0.00
cerebellum, adult.CNhs10494.15-8B2	37.48	5.56	0.59	0.00
cerebellum, neonate N30.CNhs11135.1395-42I2	33.51	4.40	0.42	0.00
colon, adult.CNhs10468.36-18H7	18.14	1.79	0.00	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	34.03	9.23	0.96	0.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	29.40	9.00	0.00	0.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	29.61	10.80	0.51	0.25
corpora quadrigemina, adult.CNhs10501.16-22A4	26.51	3.59	0.90	0.00
corpus striatum, adult.CNhs10487.19-21D8	29.28	6.41	0.00	0.00
corpus striatum, neonate N00.CNhs11226.630-43F1	89.59	17.09	0.88	0.25
cortex, adult.CNhs10473.12-14D5	33.03	4.87	1.04	0.00
cortex, neonate N30.CNhs11107.1392-42F2	39.64	6.14	0.51	0.26
diencephalon, adult.CNhs10482.20-12F2	30.54	4.57	0.62	0.00
diencephalon, neonate N30.CNhs11201.1388-42B2	31.47	4.22	0.00	0.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	36.15	11.20	0.10	0.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	22.02	7.46	0.00	0.25
epididymis, adult.CNhs10490.58-23B2	18.70	7.58	0.25	0.00
eyeball, adult.CNhs10484.31-12G4	16.20	4.42	0.00	0.00
eyeball, embryo E12.CNhs11016.345-16C6	42.81	8.07	0.26	0.26
eyeball, embryo E14.CNhs10521.399-16E2	39.77	7.59	0.23	0.23
eyeball, embryo E15.CNhs10593.426-16C9	39.43	9.00	0.00	0.00
eyeball, embryo E17.CNhs11023.1261-18D4	45.06	7.54	0.45	0.00
eyeball, neonate N00.CNhs11207.633-15C6	50.01	11.36	0.48	0.27
eyeball, neonate N01.CNhs11140.1532-43E7	49.20	8.20	0.38	0.13
eyeball, neonate N02.CNhs11205.1551-44G8	61.00	9.46	0.84	0.47
eyeball, neonate N16.CNhs11188.777-19A2	19.92	6.73	0.52	0.26
forelimb, embryo E11.CNhs10596.335-25E2	51.09	10.78	0.43	0.22
forelimb, embryo E12.CNhs10600.359-14H2	49.73	9.64	0.19	0.00
forelimb, embryo E13.CNhs10589.384-1E2	40.47	8.97	0.00	0.00
forelimb, embryo E14.CNhs10577.413-26A8	33.76	7.01	0.22	0.00
forelimb, embryo E15.CNhs11007.437-20E7	32.25	8.06	0.00	0.28
forelimb, embryo E17.CNhs10598.1517-43C4	36.57	4.88	0.00	0.00
forelimb, embryo E18.CNhs11008.1520-43B5	33.95	8.64	0.00	0.00
gonad, embryo E13.CNhs11044.1564-45I6	34.83	9.16	0.00	0.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	13.34	4.92	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	10.55	6.43	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	17.90	7.96	0.28	0.00
heart, embryo E11.CNhs10586.331-24E9	27.55	9.32	0.00	0.00
heart, embryo E12.CNhs11015.353-12F5	32.83	9.38	0.00	0.00
heart, embryo E13.CNhs11013.376-3I9	31.33	10.80	0.00	0.36
heart, embryo E14.CNhs10597.403-26D4	31.49	12.78	0.00	0.24
heart, embryo E15.CNhs11017.431-16C8	31.48	8.07	0.20	0.20
heart, embryo E16.CNhs11021.457-17C6	28.85	10.80	0.15	0.00
heart, embryo E17.CNhs11025.479-18E5	24.65	9.07	0.00	0.00
heart, embryo E18.CNhs11030.1283-20G3	27.63	5.10	0.00	0.00
heart, neonate N00.CNhs11213.639-21E3	32.23	9.46	0.00	0.00
heart, neonate N03.CNhs11221.1349-25I2	28.30	9.71	0.16	0.00
heart, neonate N10.CNhs11118.749-24G1	23.64	7.39	0.00	0.00
heart, neonate N16.CNhs11209.782-15G1	23.27	5.59	0.00	0.16
heart, neonate N20.CNhs11127.821-26I6	19.88	5.99	0.15	0.00
heart, neonate N25.CNhs11196.1351-25D3	16.03	5.71	0.00	0.00
heart, neonate N30.CNhs11202.1390-42D2	21.88	5.91	0.00	0.00
hippocampus, adult.CNhs10478.13-16E8	24.18	3.79	0.21	0.00
hippocampus, neonate N00.CNhs11228.627-43G1	74.91	11.22	0.62	0.31
intestinal mucosa, adult.CNhs10506.860-29I3	14.21	2.64	0.00	0.00
intestine, adult.CNhs10496.178-9A3	10.84	2.38	0.00	0.00
intestine, embryo E12.CNhs11019.1251-16I5	34.13	11.94	0.00	0.64
intestine, embryo E13.CNhs11010.381-16D5	38.55	9.52	0.46	0.23
intestine, embryo E15.CNhs10602.976-16D8	34.15	7.22	0.13	0.26
intestine, embryo E16.CNhs10585.463-22H4	25.01	7.66	0.00	0.00
intestine, embryo E17.CNhs10582.482-18D3	22.46	4.45	0.22	0.22
intestine, embryo E18.CNhs10526.1289-20F7	20.54	6.28	0.19	0.00
intestine, neonate N00.CNhs11126.644-26D1	18.51	2.37	0.00	0.00
intestine, neonate N01.CNhs11192.1322-23E9	22.40	6.92	0.16	0.00
intestine, neonate N06.CNhs11102.688-20B8	22.62	5.03	0.25	0.00
intestine, neonate N07.CNhs11095.720-20F2	21.69	9.75	0.00	0.40
intestine, neonate N10.CNhs11098.755-23A5	23.98	6.24	0.19	0.19
intestine, neonate N20.CNhs11187.827-18D1	24.27	2.70	0.00	0.00
intestine, neonate N25.CNhs11121.1352-25E3	19.24	4.76	0.00	0.00
intestine, neonate N30.CNhs11131.1384-42G1	18.92	3.58	0.00	0.00
kidney, embryo E14.CNhs10606.411-4I9	37.55	10.62	0.19	0.00
kidney, embryo E15.CNhs10997.434-16F8	40.33	8.80	0.11	0.23
kidney, embryo E16.CNhs10584.464-22A5	36.07	9.02	0.00	0.00
kidney, embryo E17.CNhs11028.483-18I2	31.36	8.76	0.00	0.20
kidney, embryo E18.CNhs11001.1288-20C7	31.03	8.53	0.00	0.00
kidney, neonate N00.CNhs11214.646-21G7	32.05	10.03	0.07	0.28
kidney, neonate N10.CNhs11206.758-6D5	25.99	9.36	0.19	0.06
kidney, neonate N20.CNhs11113.832-19I1	18.60	5.02	0.15	0.15
kidney, neonate N25.CNhs11122.1353-25F3	16.64	6.12	0.00	0.00
kidney, neonate N30.CNhs11203.1385-42H1	15.67	4.94	0.12	0.12
liver, adult pregnant day01.CNhs10466.508-5B2	10.08	2.67	0.00	0.00
liver, embryo E12.CNhs10601.355-15F8	23.02	5.51	0.00	0.00
liver, embryo E13.CNhs10524.378-3H6	22.01	9.04	0.00	0.00
liver, embryo E14.CNhs10594.409-16E1	17.76	5.17	0.00	0.00
liver, embryo E15.CNhs10520.433-16D7	18.87	7.10	0.00	0.00
liver, embryo E16.CNhs10523.462-17F5	19.54	6.03	0.00	0.00
liver, embryo E17.CNhs10510.481-18A3	17.57	3.06	0.00	0.00
liver, embryo E18.CNhs10579.499-43G4	17.84	4.60	0.00	0.00
liver, neonate N00.CNhs11117.641-24F4	20.43	6.49	0.16	0.16
liver, neonate N03.CNhs11123.1345-25G2	9.88	4.67	0.00	0.00
liver, neonate N06.CNhs11101.684-20A8	18.69	2.88	0.00	0.00
liver, neonate N07.CNhs11103.716-20H2	14.89	3.72	0.37	0.00
liver, neonate N10.CNhs11115.751-24B9	14.98	4.99	0.00	0.00
liver, neonate N20.CNhs11220.823-25A3	10.86	3.03	0.00	0.00
liver, neonate N25.CNhs11198.1368-26H1	10.94	2.51	0.18	0.00
liver, neonate N30.CNhs11106.1382-42D1	10.61	0.96	0.00	0.00
lung, adult.CNhs10474.28-22B1	19.95	4.99	0.00	0.18
lung, embryo E12.CNhs10522.354-16G2	36.95	10.61	0.19	0.38
lung, embryo E14.CNhs10604.404-26F8	37.81	10.59	0.16	0.00
lung, embryo E15.CNhs11020.432-17C5	33.95	11.20	0.17	0.17
lung, embryo E16.CNhs10998.458-17B6	32.62	8.68	0.00	0.23
lung, embryo E17.CNhs10605.480-44A6	30.49	9.38	0.00	0.00
lung, embryo E18.CNhs10583.1287-20I6	22.38	7.62	0.00	0.00
lung, neonate N00.CNhs11224.640-42C6	36.10	9.56	0.00	0.00
lung, neonate N06.CNhs11212.683-20E5	26.17	7.72	0.16	0.16
lung, neonate N07.CNhs11111.715-19A3	28.79	7.09	0.22	0.00
lung, neonate N10.CNhs11219.750-23E6	33.17	7.81	0.16	0.00
lung, neonate N20.CNhs11109.822-18A4	19.34	5.24	0.00	0.00
lung, neonate N25.CNhs11119.1359-25C7	23.49	6.39	0.00	0.00
lung, neonate N30.CNhs11133.1394-42H2	24.73	9.11	0.00	0.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	9.05	6.03	0.00	0.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	10.33	1.09	0.00	0.00
mammary gland, adult lactating day02.CNhs10480.595-22B6	25.08	1.97	0.00	0.00
mammary gland, adult pregnant day19.CNhs10476.588-5H2	22.35	3.31	0.00	0.00
medulla oblongata, adult.CNhs10477.17-12C2	22.96	4.17	0.16	0.16
medulla oblongata, neonate N30.CNhs11200.1396-42A3	28.48	5.16	0.35	0.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	19.02	5.41	0.00	0.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	22.47	3.03	0.25	0.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	23.66	6.31	0.00	0.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	27.33	4.29	0.00	0.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	28.01	8.40	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	30.59	8.12	0.00	0.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	28.52	9.13	0.22	0.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	35.38	13.02	0.00	0.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	38.46	7.29	0.00	0.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	33.61	8.18	0.29	0.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	31.23	7.51	0.79	0.40
olfactory brain, adult.CNhs10489.18-22I9	33.42	5.14	0.32	0.32
ovary, adult.CNhs10507.91-2I7	25.55	9.51	0.14	0.00
ovary, embryo E18.CNhs11040.505-44H7	33.30	9.26	0.36	0.18
ovary, neonate N00.CNhs11217.1299-22I4	39.42	12.38	0.49	0.00
oviduct, adult pregnant day01.CNhs10500.988-6G6	27.22	6.93	0.00	0.00
pancreas, adult.CNhs10486.34-16E4	25.22	5.31	0.00	1.33
pancreas, embryo E14.CNhs11012.405-44F4	36.17	10.20	0.24	0.49
pancreas, embryo E15.CNhs11042.1556-45F2	39.00	9.67	0.00	0.30
pancreas, embryo E16.CNhs11003.460-26E5	25.27	10.37	0.19	0.38
pancreas, embryo E17.CNhs10599.1558-45G3	21.85	8.86	0.00	0.00
pancreas, embryo E18.CNhs10580.1535-43I7	22.44	9.22	0.31	0.00
pancreas, neonate N00.CNhs11105.645-26G9	36.44	8.79	0.26	0.00
pancreas, neonate N01.CNhs11138.1531-43D7	35.26	9.45	0.36	0.73
pancreas, neonate N02.CNhs11139.1539-43D8	23.17	7.13	0.00	0.00
pancreas, neonate N16.CNhs11136.787-43B6	17.38	6.32	0.00	0.00
pancreas, neonate N25.CNhs11094.1555-45E2	11.60	5.27	0.00	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	27.85	2.06	0.00	0.00
pituitary gland, adult.CNhs10493.21-1G8	35.75	7.15	1.02	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	40.51	7.92	0.54	0.54
pituitary gland, embryo E13.CNhs11009.370-44C7	43.59	7.50	0.52	0.39
pituitary gland, embryo E14.CNhs11037.398-44A5	48.44	12.65	0.86	0.43
pituitary gland, embryo E15.CNhs10592.427-16B9	54.44	7.45	0.18	0.18
pituitary gland, embryo E16.CNhs11036.449-43F6	42.99	9.99	0.18	0.18
pituitary gland, embryo E17.CNhs11039.1265-44F5	37.68	8.23	0.00	0.49
pituitary gland, neonate N00.CNhs11190.1308-22E9	42.02	13.70	0.61	0.91
placenta, adult pregnant day10.CNhs10472.539-13I7	25.34	2.82	0.23	0.23
placenta, adult pregnant day17.CNhs10464.577-18G3	38.13	5.93	0.21	0.42
prostate, adult.CNhs10470.859-1F8	20.29	3.31	0.22	0.00
skin, adult.CNhs10492.30-1C3	40.89	8.74	0.00	0.33
skin, neonate N00.CNhs11124.650-25G4	33.26	8.07	0.16	0.16
skin, neonate N03.CNhs11215.662-22H3	30.94	10.62	0.12	0.06
skin, neonate N06.CNhs11097.693-20I5	27.69	11.34	0.00	0.12
skin, neonate N10.CNhs11108.762-6C4	32.50	8.70	0.00	0.16
small intestine, neonate N16.CNhs11114.790-21I1	21.28	4.66	0.00	0.00
spinal cord, adult.CNhs10505.24-13C9	23.73	3.71	0.37	0.00
spleen, adult.CNhs10465.25-2G2	18.11	4.78	0.00	0.00
spleen, embryo E16.CNhs11035.461-43C1	35.09	7.84	0.00	0.00
spleen, embryo E18.CNhs11011.1271-21F2	22.59	7.41	0.00	0.37
spleen, neonate N10.CNhs11116.752-24D1	20.16	7.72	0.00	0.19
spleen, neonate N20.CNhs11112.824-19H1	17.36	5.74	0.27	0.14
spleen, neonate N25.CNhs11099.1354-25G3	14.64	7.09	0.23	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	50.48	12.41	0.68	0.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	37.09	10.92	0.42	0.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	46.30	14.10	0.55	0.83
stomach, adult.CNhs10503.33-1H6	15.27	3.82	0.00	0.95
stomach, embryo E12.CNhs10588.356-43E3	43.18	11.23	0.16	0.00
stomach, embryo E15.CNhs10603.1252-16G8	32.94	6.91	0.20	0.00
stomach, embryo E16.CNhs11022.459-17D4	27.00	7.45	0.00	0.22
stomach, embryo E17.CNhs11006.1035-18D5	27.39	7.95	0.21	0.00
stomach, embryo E18.CNhs10999.1286-20C6	24.24	7.42	0.22	0.00
stomach, neonate N03.CNhs11193.1340-24B8	23.06	6.20	0.13	0.00
stomach, neonate N07.CNhs11210.718-18A9	26.95	6.69	0.25	0.08
stomach, neonate N25.CNhs11104.1355-25E4	17.28	5.50	0.00	0.26
stomach, neonate N30.CNhs11134.1386-42I1	24.89	3.50	0.13	0.00
submandibular gland, adult.CNhs10469.59-29C1	24.85	6.21	0.00	0.00
testis, adult.CNhs10504.57-7G5	101.46	2.25	33.26	26.49
testis, embryo E13.CNhs11031.389-23F5	36.93	12.86	0.15	0.15
testis, embryo E15.CNhs11034.443-27C5	39.05	7.45	0.00	0.33
testis, embryo E16.CNhs11033.470-26G5	46.86	8.75	0.97	0.97
testis, embryo E17.CNhs11029.486-18I5	44.82	8.40	1.16	0.52
testis, embryo E18.CNhs11027.503-18G5	37.85	6.93	0.68	1.18
testis, neonate N00.CNhs11189.1300-22B7	36.15	12.21	0.47	0.59
testis, neonate N07.CNhs11222.726-26I4	43.10	9.90	0.91	0.26
testis, neonate N10.CNhs11204.763-44D9	42.78	8.49	1.05	1.05
testis, neonate N20.CNhs11110.839-18H3	63.05	2.66	9.66	8.70
testis, neonate N30.CNhs11130.1391-42E2	67.40	2.59	14.69	16.71
thymus, adult.CNhs10471.38-12B5	25.91	11.06	0.00	0.00
thymus, embryo E14.CNhs11041.402-44I4	39.33	13.99	0.20	0.00
thymus, embryo E15.CNhs11005.430-45I2	30.71	9.55	0.10	0.00
thymus, embryo E16.CNhs11002.456-26C5	30.14	9.74	0.00	0.00
thymus, embryo E17.CNhs10581.478-18C1	26.85	9.13	0.18	0.00
thymus, embryo E18.CNhs10595.1273-19G4	30.00	8.74	0.00	0.00
thymus, neonate N02.CNhs11181.1541-43F8	29.57	10.58	0.12	0.12
thymus, neonate N03.CNhs11137.2104-43C7	29.69	9.90	0.00	0.00
thymus, neonate N06.CNhs11197.681-26C4	32.31	9.79	0.10	0.10
thymus, neonate N07.CNhs11211.713-19D3	29.03	11.96	0.00	0.08
thymus, neonate N10.CNhs11194.748-24E4	32.47	11.19	0.00	0.00
thymus, neonate N20.CNhs11186.820-7A2	30.02	9.26	0.10	0.00
thymus, neonate N25.CNhs11125.1362-25G7	36.95	10.87	0.00	0.10
thymus, neonate N30.CNhs11132.1393-42G2	36.58	8.42	0.00	0.12
tongue, adult.CNhs10499.32-1B4	22.22	5.89	0.00	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	43.29	6.22	0.00	0.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	31.58	5.65	0.00	0.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	49.53	8.06	0.17	0.00
urinary bladder, adult.CNhs10481.879-12E4	21.83	5.99	0.19	0.00
uterus, adult pregnant day19.CNhs10497.590-15F5	21.58	5.44	0.19	0.00
uterus, adult.CNhs10509.92-27E5	26.74	8.42	0.18	0.00
vagina, adult.CNhs10502.89-27D5	27.22	7.50	0.21	0.21
vesicular gland, adult.CNhs10491.51-27F8	29.09	5.52	0.00	0.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	43.49	5.65	0.00	0.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	44.65	6.44	0.92	0.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	42.39	4.01	0.00	0.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	30.59	3.27	0.34	0.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	33.57	4.80	0.00	0.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	27.19	6.80	0.76	0.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	38.48	4.05	0.00	0.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	35.13	6.30	0.45	0.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	31.72	5.44	0.45	0.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	38.31	3.62	0.00	0.00
whole body, embryo E11.CNhs11014.324-5I8	65.80	8.72	0.31	0.21
whole body, embryo E12.CNhs10587.857-27C9	51.87	6.38	0.40	0.00
whole body, embryo E13.CNhs10512.372-23H2	52.42	7.34	0.17	0.34
whole body, embryo E14.5.CNhs10578.420-27D2	37.20	6.08	0.00	0.24
whole body, embryo E14.CNhs10519.395-14B1	41.08	8.80	0.21	0.42
whole body, embryo E16.CNhs10514.453-14F2	39.53	9.19	0.55	0.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	32.23	6.22	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	30.49	3.91	0.21	0.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	31.13	6.74	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	27.54	5.05	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	28.64	6.34	0.25	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	33.01	7.55	0.38	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	35.49	7.30	0.37	0.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	38.67	6.47	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	39.34	6.83	0.06	0.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	31.91	8.57	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	34.42	6.61	0.12	0.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	38.39	6.94	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	37.50	7.83	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	39.45	8.24	0.15	0.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	33.26	7.20	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	31.77	7.10	0.18	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	36.24	6.44	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	31.69	5.67	0.29	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	33.41	6.21	0.19	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	31.48	5.92	0.34	0.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	35.12	6.22	0.18	0.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	26.04	5.52	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	30.69	8.01	0.27	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	28.06	7.29	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	36.90	5.58	0.24	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	39.50	7.29	0.10	0.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	37.24	4.91	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	34.86	7.75	0.00	0.00
whole body, embryo E17.5.CNhs10513.490-9F9	32.79	4.82	0.19	0.19
whole body, embryo E17.CNhs10517.475-3I5	45.97	5.75	0.25	0.00
whole body, embryo E18.CNhs10516.493-3B3	31.11	6.78	0.47	0.00
whole body, neonate N00.CNhs10525.657-19C2	32.23	6.23	0.00	0.21
whole body, neonate N01.CNhs10576.659-23C6	32.52	9.37	0.00	0.19
whole body, neonate N06.CNhs10515.692-21D1	24.04	7.06	0.22	0.00
whole body, neonate N10.CNhs10518.761-6B4	19.94	6.72	0.23	0.00

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

---

No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

---

GeneID:	99982
LocusTag:	RP23-426N4.2
chromosome:	4
map location:	4 D3, 4 66.75 cM, 4 D3;;4 66.75 cM
type of gene:	protein-coding
Symbol from nomenclature authority:	Kdm1a
Full name from nomenclature authority:	lysine (K)-specific demethylase 1A
Nomenclature status:	O
Other designations:	BRAF35-HDAC complex protein BHC110, amine oxidase (flavin containing) domain 2, flavin-containing amine oxidase domain-containing protein 2, lysine (K)-specific demethylase 1, lysine-specific histone demethylase 1, lysine-specific histone demethylase 1A, BRAF35-HDAC complex protein BHC110;;amine oxidase (flavin containing) domain 2;;flavin-containing amine oxidase domain-containing protein 2;;lysine (K)-specific demethylase 1;;lysine-specific histone demethylase 1;;lysine-specific histone demethylase 1A
Modification date:	13.01.2012