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UBERON:0005419

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Name:forelimb/pectoral fin bud
Definition:"A limb bud that develops into a forelimb or pectoral fin." [OBOL:automatic]
Xrefs:
links:

VHOG:0001259

ZFA:0000141
Comments:at this time we have no need to name a more specific 'pectoral fin bud' class, but we may in future

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004357(paired limb/fin bud)
develops_from:UBERON:0005729(forelimb/pectoral fin field)
part_of:UBERON:0000153(anterior region of body)



Children

is a:UBERON:0005417 (forelimb bud)
develops from:UBERON:0004710 (pectoral appendage)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005419 (forelimb/pectoral fin bud), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.33e-86FFCP PHASE1:Mm9::chr2:74499300..74499309,-#_d68060ce49e5d2f83fc1c2e3818de8a2p5@Evx2
1.33e-86FFCP PHASE2:Mm9::chr2:74499300..74499309,-#_d68060ce49e5d2f83fc1c2e3818de8a2p5@Evx2
2.4e-74FFCP PHASE1:Mm9::chr15:51484092..51484121,-#_7821bb11feabd287b40f52e73911046bp@chr15:51484092..51484121, -
2.4e-74FFCP PHASE1:Mm9::chr5:120256413..120256428,-#_7821bb11feabd287b40f52e73911046bp@chr5:120256413..120256428, -
2.4e-74FFCP PHASE2:Mm9::chr15:51484092..51484121,-#_7821bb11feabd287b40f52e73911046bp@chr15:51484092..51484121, -
2.4e-74FFCP PHASE2:Mm9::chr2:165983686..165983720,-#_7821bb11feabd287b40f52e73911046bp@chr2:165983686..165983720, -
2.4e-74FFCP PHASE1:Mm9::chr2:165983686..165983720,-#_7821bb11feabd287b40f52e73911046bp@chr2:165983686..165983720, -
2.4e-74FFCP PHASE2:Mm9::chr5:120256413..120256428,-#_7821bb11feabd287b40f52e73911046bp@chr5:120256413..120256428, -
1.21e-61FFCP PHASE1:Mm9::chr2:74505324..74505330,+#_5ffcb35a1bb5f3efc5a488045e23133cp@chr2:74505324..74505330, +
1.21e-61FFCP PHASE2:Mm9::chr2:74505324..74505330,+#_5ffcb35a1bb5f3efc5a488045e23133cp@chr2:74505324..74505330, +
2.24e-61FFCP PHASE2:Mm9::chr2:74506264..74506286,+#_8c61720794a5509a7c8fcb2ffd410569p1@Hoxd13
2.24e-61FFCP PHASE1:Mm9::chr2:74506264..74506286,+#_8c61720794a5509a7c8fcb2ffd410569p1@Hoxd13
3.63e-52FFCP PHASE1:Mm9::chr2:74513064..74513089,+#_2e77e1c75e0a0067d4e8e601d91097fap2@Hoxd12
3.63e-52FFCP PHASE2:Mm9::chr2:74513064..74513089,+#_2e77e1c75e0a0067d4e8e601d91097fap2@Hoxd12
4.62e-52FFCP PHASE1:Mm9::chr2:74499251..74499258,-#_d9cdfafed23c68be8eebef66bcebd316p4@Evx2
4.62e-52FFCP PHASE2:Mm9::chr2:74499251..74499258,-#_d9cdfafed23c68be8eebef66bcebd316p4@Evx2
5.88e-52FFCP PHASE2:Mm9::chr2:33574246..33574257,-#_f94cb03d5c9564cfdf410315a0e0f4d2p3@ENSMUST00000130532
5.88e-52FFCP PHASE1:Mm9::chr2:33574246..33574257,-#_f94cb03d5c9564cfdf410315a0e0f4d2p3@ENSMUST00000130532
5.28e-50FFCP PHASE1:Mm9::chr2:74521516..74521525,+#_cc485d38a5ffa759c0176e5abddabc6fp1@ENSMUST00000136302
5.28e-50FFCP PHASE2:Mm9::chr2:74521516..74521525,+#_cc485d38a5ffa759c0176e5abddabc6fp1@ENSMUST00000136302
9.21e-50FFCP PHASE1:Mm9::chr6:51009701..51009744,-#_8957fe04ee01464d3490074e07808cabp@chr6:51009701..51009744, -
9.21e-50FFCP PHASE2:Mm9::chr6:51009701..51009744,-#_8957fe04ee01464d3490074e07808cabp@chr6:51009701..51009744, -
2.92e-48FFCP PHASE1:Mm9::chr10:97069737..97069749,+#_df502feb9e50a3bc0a6580d268b3f123p5@Kera
2.92e-48FFCP PHASE2:Mm9::chr10:97069737..97069749,+#_df502feb9e50a3bc0a6580d268b3f123p5@Kera
4.71e-48FFCP PHASE1:Mm9::chr6:52210816..52210831,-#_0f738be9030074d35ca11a359b470840p2@Hoxa13
4.71e-48FFCP PHASE2:Mm9::chr6:52210816..52210831,-#_0f738be9030074d35ca11a359b470840p2@Hoxa13
6.47e-48FFCP PHASE2:Mm9::chr2:74513149..74513159,+#_323d3e0cd4741b14b397e22eb00c3837p@chr2:74513149..74513159, +
6.47e-48FFCP PHASE1:Mm9::chr2:74513149..74513159,+#_323d3e0cd4741b14b397e22eb00c3837p@chr2:74513149..74513159, +
1.4e-44FFCP PHASE1:Mm9::chr1:165288513..165288518,+#_bb857a93bb510604d0e697b206e0c4d3p@chr1:165288513..165288518, +
1.4e-44FFCP PHASE2:Mm9::chr1:165288513..165288518,+#_bb857a93bb510604d0e697b206e0c4d3p@chr1:165288513..165288518, +
2.07e-41FFCP PHASE1:Mm9::chr1:164064835..164064864,-#_1eee094029911cc0f0574d0de9796f46p3@Dnm3
2.07e-41FFCP PHASE2:Mm9::chr1:164064835..164064864,-#_1eee094029911cc0f0574d0de9796f46p3@Dnm3
2.91e-40FFCP PHASE2:Mm9::chr2:33574267..33574279,-#_68f9e1b5df576eb64f73589d868f5782p1@ENSMUST00000130532
2.91e-40FFCP PHASE1:Mm9::chr2:33574267..33574279,-#_68f9e1b5df576eb64f73589d868f5782p1@ENSMUST00000130532
3.67e-40FFCP PHASE2:Mm9::chr2:33574309..33574319,-#_8ea4ae74fd61a52076699254b3e4b533p4@ENSMUST00000130532
3.67e-40FFCP PHASE1:Mm9::chr2:33574309..33574319,-#_8ea4ae74fd61a52076699254b3e4b533p4@ENSMUST00000130532
5.46e-39FFCP PHASE2:Mm9::chr6:52195000..52195013,+#_18e87ac563e1ac269e3fd566484a6885p3@Hoxa11as
5.46e-39FFCP PHASE1:Mm9::chr6:52195000..52195013,+#_18e87ac563e1ac269e3fd566484a6885p3@Hoxa11as
6.59e-38FFCP PHASE2:Mm9::chr2:74512009..74512012,+#_54af53987cb80481fa22570bb8ac3b55p@chr2:74512009..74512012, +
6.59e-38FFCP PHASE1:Mm9::chr2:74512009..74512012,+#_54af53987cb80481fa22570bb8ac3b55p@chr2:74512009..74512012, +
1.94e-35FFCP PHASE2:Mm9::chr2:33496847..33496857,+#_cc951433ec62abf95666707856fd4eedp3@ENSMUST00000147294, p3@uc008jia.1
1.94e-35FFCP PHASE1:Mm9::chr2:33496847..33496857,+#_cc951433ec62abf95666707856fd4eedp3@ENSMUST00000147294, p3@uc008jia.1
9.74e-35FFCP PHASE2:Mm9::chr13:89680110..89680115,+#_3d738b2604cd14a2596d7d0fabe04068p6@Hapln1
9.74e-35FFCP PHASE1:Mm9::chr13:89680110..89680115,+#_3d738b2604cd14a2596d7d0fabe04068p6@Hapln1
2.95e-34FFCP PHASE2:Mm9::chr9:96754986..96754989,-#_42dd67c239477eb9725a1cfdce0021fdp3@Acpl2
2.95e-34FFCP PHASE1:Mm9::chr9:96754986..96754989,-#_42dd67c239477eb9725a1cfdce0021fdp3@Acpl2
6.28e-34FFCP PHASE1:Mm9::chr8:23734491..23734495,+#_477310b1e609626c4ad6f2bf62b4f2c2p1@Dkk4
6.28e-34FFCP PHASE2:Mm9::chr8:23734491..23734495,+#_477310b1e609626c4ad6f2bf62b4f2c2p1@Dkk4
7.62e-34FFCP PHASE2:Mm9::chr2:155770985..155770995,-#_552e0d7fb9ac92fff213388c5427c050p2@Gdf5
7.62e-34FFCP PHASE1:Mm9::chr2:155770985..155770995,-#_552e0d7fb9ac92fff213388c5427c050p2@Gdf5
2.0e-33FFCP PHASE2:Mm9::chr18:80910310..80910329,-#_3fa0e0017c654d31966872b162a60147p@chr18:80910310..80910329, -
2.0e-33FFCP PHASE1:Mm9::chr18:80910310..80910329,-#_3fa0e0017c654d31966872b162a60147p@chr18:80910310..80910329, -
1.89e-32FFCP PHASE2:Mm9::chr6:52210774..52210787,-#_2b361a45f4944d175d2abc8afe8959f3p1@Hoxa13
1.89e-32FFCP PHASE1:Mm9::chr6:52210774..52210787,-#_2b361a45f4944d175d2abc8afe8959f3p1@Hoxa13
6.43e-32FFCP PHASE2:Mm9::chr2:33498116..33498124,+#_0c0a261a6d82124a04d6c5f879459394p@chr2:33498116..33498124, +
6.43e-32FFCP PHASE1:Mm9::chr2:33498116..33498124,+#_0c0a261a6d82124a04d6c5f879459394p@chr2:33498116..33498124, +
7.44e-32FFCP PHASE2:Mm9::chr2:33496574..33496588,+#_7c2aa5778e164ae0b4b505672617b342p4@ENSMUST00000152118, p4@uc008jhz.1
7.44e-32FFCP PHASE1:Mm9::chr2:33496574..33496588,+#_7c2aa5778e164ae0b4b505672617b342p4@ENSMUST00000152118, p4@uc008jhz.1
1.09e-30FFCP PHASE2:Mm9::chr2:74520075..74520087,+#_f0f31116f26388e91d34f02ab64f1516p6@Hoxd11
1.09e-30FFCP PHASE1:Mm9::chr2:74520075..74520087,+#_f0f31116f26388e91d34f02ab64f1516p6@Hoxd11
2.22e-30FFCP PHASE1:Mm9::chr12:34649201..34649205,+#_dc62503b298791738430665cf8e919a2p@chr12:34649201..34649205, +
2.22e-30FFCP PHASE2:Mm9::chr12:34649201..34649205,+#_dc62503b298791738430665cf8e919a2p@chr12:34649201..34649205, +
1.6e-29FFCP PHASE2:Mm9::chr5:120285104..120285113,+#_fef4d5b3e1956a69ab424a91b88528a6p5@Tbx5
1.6e-29FFCP PHASE1:Mm9::chr5:120285104..120285113,+#_fef4d5b3e1956a69ab424a91b88528a6p5@Tbx5
4.13e-29FFCP PHASE2:Mm9::chr5:120246556..120246565,+#_0545a4238bef432af8e20cea504579f3p@chr5:120246556..120246565, +
4.13e-29FFCP PHASE1:Mm9::chr5:120246556..120246565,+#_0545a4238bef432af8e20cea504579f3p@chr5:120246556..120246565, +
4.91e-29FFCP PHASE2:Mm9::chr5:120246522..120246553,+#_8754c86616a576cab614b060ffbeecc7p@chr5:120246522..120246553, +
4.91e-29FFCP PHASE1:Mm9::chr5:120246522..120246553,+#_8754c86616a576cab614b060ffbeecc7p@chr5:120246522..120246553, +
5.59e-29FFCP PHASE1:Mm9::chr16:77329743..77329754,+#_50ea5c001fb92c1bec14875eba94af70p14@2810055G20Rik
5.59e-29FFCP PHASE2:Mm9::chr16:77329743..77329754,+#_50ea5c001fb92c1bec14875eba94af70p14@2810055G20Rik
8.27e-29FFCP PHASE1:Mm9::chr3:29912310..29912321,-#_79158ec80211f016a4c6dd304952f9bbp23@Mecom
8.27e-29FFCP PHASE2:Mm9::chr3:29912310..29912321,-#_79158ec80211f016a4c6dd304952f9bbp23@Mecom
6.5e-28FFCP PHASE1:Mm9::chr3:99044251..99044260,+#_b4f2042131d54edc43330aee962209edp8@Tbx15
6.5e-28FFCP PHASE2:Mm9::chr3:99044251..99044260,+#_b4f2042131d54edc43330aee962209edp8@Tbx15
3.95e-27FFCP PHASE1:Mm9::chr15:97807283..97807309,-#_6085d14844030b70873f3b0bcd072399p@chr15:97807283..97807309, -
3.95e-27FFCP PHASE2:Mm9::chr15:97807283..97807309,-#_6085d14844030b70873f3b0bcd072399p@chr15:97807283..97807309, -
5.23e-27FFCP PHASE2:Mm9::chr1:165244244..165244254,-#_b1bc8bf285b12f47d236b418e4a9c715p8@Prrx1
5.23e-27FFCP PHASE1:Mm9::chr1:165244244..165244254,-#_b1bc8bf285b12f47d236b418e4a9c715p8@Prrx1
1.4e-26FFCP PHASE2:Mm9::chr5:42155277..42155281,-#_1a9ba8e3d412ae3869dae04fc531ed6ep2@Nkx3-2
1.4e-26FFCP PHASE1:Mm9::chr5:42155277..42155281,-#_1a9ba8e3d412ae3869dae04fc531ed6ep2@Nkx3-2
1.64e-26FFCP PHASE1:Mm9::chr16:95807232..95807250,-#_972cb40867267d1cdbe95659a9d8fd27p@chr16:95807232..95807250, -
1.64e-26FFCP PHASE2:Mm9::chr16:95807232..95807250,-#_972cb40867267d1cdbe95659a9d8fd27p@chr16:95807232..95807250, -
7.57e-26FFCP PHASE1:Mm9::chr3:37606335..37606337,-#_a3c6426b55b9ed0d0ec186fe67a937d9p@chr3:37606335..37606337, -
7.57e-26FFCP PHASE1:Mm9::chr3:86116124..86116132,+#_a3c6426b55b9ed0d0ec186fe67a937d9p@chr3:86116124..86116132, +
7.57e-26FFCP PHASE1:Mm9::chr4:125973415..125973418,+#_a3c6426b55b9ed0d0ec186fe67a937d9p@chr4:125973415..125973418, +
7.57e-26FFCP PHASE2:Mm9::chr3:86116124..86116132,+#_a3c6426b55b9ed0d0ec186fe67a937d9p@chr3:86116124..86116132, +
7.57e-26FFCP PHASE2:Mm9::chr4:125973415..125973418,+#_a3c6426b55b9ed0d0ec186fe67a937d9p@chr4:125973415..125973418, +
7.57e-26FFCP PHASE2:Mm9::chr3:37606335..37606337,-#_a3c6426b55b9ed0d0ec186fe67a937d9p@chr3:37606335..37606337, -
1.07e-25FFCP PHASE2:Mm9::chr17:68300324..68300336,-#_39bfe93664e0a01ba0480dec317b41bep5@Arhgap28
1.07e-25FFCP PHASE1:Mm9::chr17:68300324..68300336,-#_39bfe93664e0a01ba0480dec317b41bep5@Arhgap28
2.33e-25FFCP PHASE2:Mm9::chr7:75096968..75096978,+#_82a9b513358399590bb11c5e93769ee0p9@Igf1r
2.33e-25FFCP PHASE1:Mm9::chr7:75096968..75096978,+#_82a9b513358399590bb11c5e93769ee0p9@Igf1r
2.93e-25FFCP PHASE1:Mm9::chr15:101936581..101936594,+#_680eeaf75a2d6d63e0075ad5251cd643p@chr15:101936581..101936594, +
2.93e-25FFCP PHASE2:Mm9::chr15:101936581..101936594,+#_680eeaf75a2d6d63e0075ad5251cd643p@chr15:101936581..101936594, +
2.99e-25FFCP PHASE2:Mm9::chr17:23882313..23882330,-#_6dbc3bc4593bb699f5a4ba04c3b1ca12p@chr17:23882313..23882330, -
2.99e-25FFCP PHASE1:Mm9::chr17:23882313..23882330,-#_6dbc3bc4593bb699f5a4ba04c3b1ca12p@chr17:23882313..23882330, -
3.52e-25FFCP PHASE2:Mm9::chr2:155771018..155771042,-#_352ec4de08e5a02932b64150dde02b64p1@Gdf5
3.52e-25FFCP PHASE1:Mm9::chr2:155771018..155771042,-#_352ec4de08e5a02932b64150dde02b64p1@Gdf5
2.77e-24FFCP PHASE1:Mm9::chr15:77137392..77137399,-#_40f06ef8cfdf3993b7ace92d9f86635bp16@Rbfox2
2.77e-24FFCP PHASE2:Mm9::chr15:77137392..77137399,-#_40f06ef8cfdf3993b7ace92d9f86635bp16@Rbfox2

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