Personal tools

CL:0000154

From FANTOM5_SSTAR

Revision as of 13:35, 8 February 2012 by Autoedit (talk | contribs) (Created page with "{{CL |id=CL:0000154 |name=protein secreting cell |namespace=cell |def= |xref= |is_a=CL:0000151 |synonym= |comment= |alt_id= |disjoint_from= |union_of= |created_by=...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Name:protein secreting cell
Namespace:cell


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000151(secretory cell)



Children


is a:CL:0000323 (lysozyme secreting cell),CL:0000511 (androgen binding protein secreting cell),CL:0000622 (acinar cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000154 (protein secreting cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.83e-98FFCP PHASE2:Hg19::chr5:66942627..66942643,-#_de69d508e5834c73ea4bbffe6519dd2fp1@ENST00000507298
1.83e-98FFCP PHASE1:Hg19::chr6:25004699..25004706,-#_de69d508e5834c73ea4bbffe6519dd2fp@chr6:25004699..25004706, -
1.83e-98FFCP PHASE1:Hg19::chr5:66942627..66942643,-#_de69d508e5834c73ea4bbffe6519dd2fp1@ENST00000507298
1.83e-98FFCP PHASE2:Hg19::chr6:25004699..25004706,-#_de69d508e5834c73ea4bbffe6519dd2fp@chr6:25004699..25004706, -
2.58e-74FFCP PHASE2:Hg19::chr6:25004760..25004769,-#_514b729549be3750e3bca70e832777d8p@chr6:25004760..25004769, -
2.58e-74FFCP PHASE1:Hg19::chr6:25004888..25004899,-#_514b729549be3750e3bca70e832777d8p@chr6:25004888..25004899, -
2.58e-74FFCP PHASE2:Hg19::chr6:25004888..25004899,-#_514b729549be3750e3bca70e832777d8p@chr6:25004888..25004899, -
2.58e-74FFCP PHASE1:Hg19::chr6:25004760..25004769,-#_514b729549be3750e3bca70e832777d8p@chr6:25004760..25004769, -
5.47e-74FFCP PHASE1:Hg19::chr12:966094..966103,+#_ebf4c9d0bb71442f38b5730970bf513ep@chr12:966094..966103, +
5.47e-74FFCP PHASE2:Hg19::chr12:966094..966103,+#_ebf4c9d0bb71442f38b5730970bf513ep@chr12:966094..966103, +
2.83e-66FFCP PHASE1:Hg19::chr3:48471830..48471839,-#_b621ac7f521cca5101a28d06ee8a1797p27@PLXNB1
2.83e-66FFCP PHASE2:Hg19::chr3:48471830..48471839,-#_b621ac7f521cca5101a28d06ee8a1797p27@PLXNB1
8.15e-60FFCP PHASE1:Hg19::chr6:25004791..25004799,-#_732adcbab06e82bb36d7695cd574f57fp@chr6:25004791..25004799, -
8.15e-60FFCP PHASE2:Hg19::chr6:25004791..25004799,-#_732adcbab06e82bb36d7695cd574f57fp@chr6:25004791..25004799, -
1.17e-58FFCP PHASE1:Hg19::chr15:95334390..95334402,-#_e88fdfbd5bbb7639adcd041fd16d84c9p@chr15:95334390..95334402, -
1.17e-58FFCP PHASE2:Hg19::chr15:95334390..95334402,-#_e88fdfbd5bbb7639adcd041fd16d84c9p@chr15:95334390..95334402, -
1.82e-58FFCP PHASE1:Hg19::chr10:47740297..47740299,+#_a3d5360dd10bad0307b4f842447d85aap1@FAM25HP
1.82e-58FFCP PHASE2:Hg19::chr10:47740297..47740299,+#_a3d5360dd10bad0307b4f842447d85aap1@FAM25HP
6.05e-53FFCP PHASE1:Hg19::chr17:38978586..38978620,-#_d2c475b1971e8f1aee91556b94aa6ff0p5@KRT10
6.05e-53FFCP PHASE2:Hg19::chr17:38978586..38978620,-#_d2c475b1971e8f1aee91556b94aa6ff0p5@KRT10
3.84e-50FFCP PHASE1:Hg19::chr6:25004678..25004688,-#_f914f86820c9399ee7febb45f6f488c5p@chr6:25004678..25004688, -
3.84e-50FFCP PHASE2:Hg19::chr6:25004678..25004688,-#_f914f86820c9399ee7febb45f6f488c5p@chr6:25004678..25004688, -
6.35e-50FFCP PHASE2:Hg19::chr12:52912957..52912973,-#_488fbfab45e87d8e2fa1e476294fbbfdp17@KRT5
6.35e-50FFCP PHASE1:Hg19::chr12:52912957..52912973,-#_488fbfab45e87d8e2fa1e476294fbbfdp17@KRT5
2.88e-48FFCP PHASE1:Hg19::chr17:38978257..38978272,-#_7aaade785ea05ed943cebfa67e6ec04cp6@KRT10
2.88e-48FFCP PHASE2:Hg19::chr17:38978257..38978272,-#_7aaade785ea05ed943cebfa67e6ec04cp6@KRT10
3.67e-48FFCP PHASE1:Hg19::chr17:38976838..38976861,-#_b5b9a8c2e3a07b195c9b4a7eefcf802cp@chr17:38976838..38976861, -
3.67e-48FFCP PHASE2:Hg19::chr17:38976838..38976861,-#_b5b9a8c2e3a07b195c9b4a7eefcf802cp@chr17:38976838..38976861, -
9.76e-45FFCP PHASE1:Hg19::chr7:7604061..7604072,-#_c6fdc3ccb13414da2fe82209120bad31p@chr7:7604061..7604072, -
9.76e-45FFCP PHASE2:Hg19::chr7:7604061..7604072,-#_c6fdc3ccb13414da2fe82209120bad31p@chr7:7604061..7604072, -
2.55e-44FFCP PHASE1:Hg19::chr10:105830210..105830215,-#_d6255bc3a58260a2d168f4d28135f932p@chr10:105830210..105830215, -
2.55e-44FFCP PHASE2:Hg19::chr10:105830210..105830215,-#_d6255bc3a58260a2d168f4d28135f932p@chr10:105830210..105830215, -
3.65e-43FFCP PHASE1:Hg19::chr20:3295706..3295717,-#_86ac03ec8611c8743ea1eda0f3518424p@chr20:3295706..3295717, -
3.65e-43FFCP PHASE1:Hg19::chr6:56488575..56488587,-#_86ac03ec8611c8743ea1eda0f3518424p@chr6:56488575..56488587, -
3.65e-43FFCP PHASE2:Hg19::chr6:56488575..56488587,-#_86ac03ec8611c8743ea1eda0f3518424p@chr6:56488575..56488587, -
3.65e-43FFCP PHASE2:Hg19::chr20:3295706..3295717,-#_86ac03ec8611c8743ea1eda0f3518424p@chr20:3295706..3295717, -
4.86e-43FFCP PHASE1:Hg19::chr17:38978519..38978529,-#_2f3a549618f4b1b5b46969dc26aae4a2p9@KRT10
4.86e-43FFCP PHASE2:Hg19::chr17:38978519..38978529,-#_2f3a549618f4b1b5b46969dc26aae4a2p9@KRT10
6.48e-43FFCP PHASE1:Hg19::chr17:38978422..38978432,-#_da73f2f13b555052ecd34684f70c9956p12@KRT10
6.48e-43FFCP PHASE2:Hg19::chr17:38978422..38978432,-#_da73f2f13b555052ecd34684f70c9956p12@KRT10
1.95e-37FFCP PHASE1:Hg19::chr2:19428508..19428522,-#_9539f33652d3b4de39b71a4be00415f3p@chr2:19428508..19428522, -
1.95e-37FFCP PHASE2:Hg19::chr2:19428508..19428522,-#_9539f33652d3b4de39b71a4be00415f3p@chr2:19428508..19428522, -
2.37e-36FFCP PHASE1:Hg19::chr10:118187381..118187397,+#_2e9290c87bf7b93ee418d268622ecd06p3@PNLIPRP3
2.37e-36FFCP PHASE2:Hg19::chr10:118187381..118187397,+#_2e9290c87bf7b93ee418d268622ecd06p3@PNLIPRP3
9.61e-36FFCP PHASE1:Hg19::chr1:153044083..153044088,-#_e903e9926d62813faf9e3b740e04c7d5p1@SPRR2B
9.61e-36FFCP PHASE2:Hg19::chr1:153044083..153044088,-#_e903e9926d62813faf9e3b740e04c7d5p1@SPRR2B
1.37e-35FFCP PHASE1:Hg19::chr10:102981544..102981563,+#_2b54cb5d10b8e9277870a1b88d25f214p@chr10:102981544..102981563, +
1.37e-35FFCP PHASE2:Hg19::chr10:102981544..102981563,+#_2b54cb5d10b8e9277870a1b88d25f214p@chr10:102981544..102981563, +
4.27e-34FFCP PHASE1:Hg19::chr11:27721743..27721753,-#_bc0be71b4c1fd308e7ac227f874a55f9p26@BDNF
4.27e-34FFCP PHASE1:Hg19::chr17:38975839..38975846,-#_bc0be71b4c1fd308e7ac227f874a55f9p14@KRT10
4.27e-34FFCP PHASE2:Hg19::chr20:3295742..3295749,-#_bc0be71b4c1fd308e7ac227f874a55f9p@chr20:3295742..3295749, -
4.27e-34FFCP PHASE1:Hg19::chr11:86285462..86285463,-#_bc0be71b4c1fd308e7ac227f874a55f9p@chr11:86285462..86285463, -
4.27e-34FFCP PHASE2:Hg19::chr17:38975839..38975846,-#_bc0be71b4c1fd308e7ac227f874a55f9p14@KRT10
4.27e-34FFCP PHASE2:Hg19::chr11:27721743..27721753,-#_bc0be71b4c1fd308e7ac227f874a55f9p26@BDNF
4.27e-34FFCP PHASE1:Hg19::chr17:38977367..38977371,-#_bc0be71b4c1fd308e7ac227f874a55f9p@chr17:38977367..38977371, -
4.27e-34FFCP PHASE2:Hg19::chr17:38977367..38977371,-#_bc0be71b4c1fd308e7ac227f874a55f9p@chr17:38977367..38977371, -
4.27e-34FFCP PHASE1:Hg19::chr17:38978288..38978293,-#_bc0be71b4c1fd308e7ac227f874a55f9p21@KRT10
4.27e-34FFCP PHASE2:Hg19::chr11:86285462..86285463,-#_bc0be71b4c1fd308e7ac227f874a55f9p@chr11:86285462..86285463, -
4.27e-34FFCP PHASE1:Hg19::chr20:3295742..3295749,-#_bc0be71b4c1fd308e7ac227f874a55f9p@chr20:3295742..3295749, -
4.27e-34FFCP PHASE2:Hg19::chr17:38978288..38978293,-#_bc0be71b4c1fd308e7ac227f874a55f9p21@KRT10
5.37e-34FFCP PHASE2:Hg19::chr6:25004775..25004790,-#_3a2a203455ed83669598350bb242f3d1p@chr6:25004775..25004790, -
5.37e-34FFCP PHASE1:Hg19::chr13:43059605..43059611,+#_3a2a203455ed83669598350bb242f3d1p@chr13:43059605..43059611, +
5.37e-34FFCP PHASE2:Hg19::chr13:43059605..43059611,+#_3a2a203455ed83669598350bb242f3d1p@chr13:43059605..43059611, +
5.37e-34FFCP PHASE1:Hg19::chr6:25004775..25004790,-#_3a2a203455ed83669598350bb242f3d1p@chr6:25004775..25004790, -
7.51e-34FFCP PHASE1:Hg19::chr12:3600112..3600125,+#_b998a0e8888c3f6a382a9b32a41a76cep6@PRMT8
7.51e-34FFCP PHASE2:Hg19::chr12:3600112..3600125,+#_b998a0e8888c3f6a382a9b32a41a76cep6@PRMT8
8.35e-34FFCP PHASE2:Hg19::chr1:153321274..153321283,-#_6bd6c197b7505ddad95bb5a7baf588edp2@PGLYRP4
8.35e-34FFCP PHASE2:Hg19::chr3:140961094..140961103,+#_6bd6c197b7505ddad95bb5a7baf588edp@chr3:140961094..140961103, +
8.35e-34FFCP PHASE1:Hg19::chr17:38976882..38976895,-#_6bd6c197b7505ddad95bb5a7baf588edp@chr17:38976882..38976895, -
8.35e-34FFCP PHASE1:Hg19::chr1:153321274..153321283,-#_6bd6c197b7505ddad95bb5a7baf588edp2@PGLYRP4
8.35e-34FFCP PHASE1:Hg19::chr3:140961094..140961103,+#_6bd6c197b7505ddad95bb5a7baf588edp@chr3:140961094..140961103, +
8.35e-34FFCP PHASE2:Hg19::chr17:38976882..38976895,-#_6bd6c197b7505ddad95bb5a7baf588edp@chr17:38976882..38976895, -
8.4e-34FFCP PHASE1:Hg19::chr17:38976601..38976615,-#_c2d4ce91f0013f7e2dc496d1d4583d21p@chr17:38976601..38976615, -
8.4e-34FFCP PHASE2:Hg19::chr17:38976601..38976615,-#_c2d4ce91f0013f7e2dc496d1d4583d21p@chr17:38976601..38976615, -
9.87e-34FFCP PHASE1:Hg19::chrY:7671916..7671924,-#_35f4e4e61b174371a1f808301c28cc87p@chrY:7671916..7671924, -
9.87e-34FFCP PHASE2:Hg19::chrY:7671916..7671924,-#_35f4e4e61b174371a1f808301c28cc87p@chrY:7671916..7671924, -
1.17e-33FFCP PHASE2:Hg19::chr17:38978621..38978636,-#_c0a734ee9550fe7ff1a3fa96b7ad9627p8@KRT10
1.17e-33FFCP PHASE1:Hg19::chr17:38978621..38978636,-#_c0a734ee9550fe7ff1a3fa96b7ad9627p8@KRT10
1.64e-33FFCP PHASE1:Hg19::chr17:38976811..38976823,-#_0c8ccf8c094901e12853b537fb43666cp@chr17:38976811..38976823, -
1.64e-33FFCP PHASE2:Hg19::chr17:38976811..38976823,-#_0c8ccf8c094901e12853b537fb43666cp@chr17:38976811..38976823, -
3.37e-33FFCP PHASE2:Hg19::chr1:152943122..152943128,+#_687e41d533a23052aec8c3ee95d86be1p1@SPRR4
3.37e-33FFCP PHASE1:Hg19::chr1:152943122..152943128,+#_687e41d533a23052aec8c3ee95d86be1p1@SPRR4
3.56e-33FFCP PHASE1:Hg19::chr17:38984452..38984467,+#_a288742cfff215a070662c68500b0467p@chr17:38984452..38984467, +
3.56e-33FFCP PHASE2:Hg19::chr17:38984452..38984467,+#_a288742cfff215a070662c68500b0467p@chr17:38984452..38984467, +
6.02e-33FFCP PHASE1:Hg19::chr2:131669765..131669776,+#_d95a6e594a0e28422b41152a1618afe7p@chr2:131669765..131669776, +
6.02e-33FFCP PHASE2:Hg19::chr2:131669765..131669776,+#_d95a6e594a0e28422b41152a1618afe7p@chr2:131669765..131669776, +
5.0e-32FFCP PHASE1:Hg19::chr17:39742637..39742657,-#_9442acaf2035d02024e9aed44da1cc1ap3@BC127260
5.0e-32FFCP PHASE2:Hg19::chr17:39742637..39742657,-#_9442acaf2035d02024e9aed44da1cc1ap3@BC127260
3.17e-31FFCP PHASE1:Hg19::chr17:73753308..73753323,+#_e9b5b22b6541631c32b19a3db740648dp@chr17:73753308..73753323, +
3.17e-31FFCP PHASE2:Hg19::chr17:73753308..73753323,+#_e9b5b22b6541631c32b19a3db740648dp@chr17:73753308..73753323, +
7.02e-31FFCP PHASE1:Hg19::chr5:159849211..159849231,+#_976d43c4d421b02b39cc2785dfb25dc8p5@PTTG1
7.02e-31FFCP PHASE2:Hg19::chr5:159849211..159849231,+#_976d43c4d421b02b39cc2785dfb25dc8p5@PTTG1
1.38e-30FFCP PHASE1:Hg19::chr1:197657822..197657832,+#_ae1f6ffbb6b425ac1c4bb72105f745e2p1@EEF1A1P32
1.38e-30FFCP PHASE2:Hg19::chr1:197657822..197657832,+#_ae1f6ffbb6b425ac1c4bb72105f745e2p1@EEF1A1P32
2.04e-30FFCP PHASE1:Hg19::chr1:2360073..2360082,+#_3ecef08f20c24684599d4fe8e6224ca2p@chr1:2360073..2360082, +
2.04e-30FFCP PHASE2:Hg19::chr1:2360073..2360082,+#_3ecef08f20c24684599d4fe8e6224ca2p@chr1:2360073..2360082, +
2.28e-30FFCP PHASE1:Hg19::chr1:152769195..152769200,+#_ed95ccdd58cb97b2bec969cef7259cc4p1@LCE1D
2.28e-30FFCP PHASE2:Hg19::chr1:152769195..152769200,+#_ed95ccdd58cb97b2bec969cef7259cc4p1@LCE1D
2.78e-30FFCP PHASE1:Hg19::chr17:38652332..38652344,-#_903b46a2f5efba531fd5844447751c49p18@TNS4
2.78e-30FFCP PHASE2:Hg19::chr17:38652332..38652344,-#_903b46a2f5efba531fd5844447751c49p18@TNS4