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BMM TB infection control: Difference between revisions

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(Created page with "{{Time_Course |collaborators=Boris Lenhard, Ana Pombo |description=ES embryonic stem cell series |libraryids=CNhs14085,CNhs14086,CNhs14087,CNhs14088,CNhs14089,CNhs14090,CNhs14...")
 
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{{Time_Course
{{TimeCourse
|collaborators=Boris Lenhard, Ana Pombo
|Time_Course=
|description=ES embryonic stem cell series
|collaborators=Frank Brombacher
|libraryids=CNhs14085,CNhs14086,CNhs14087,CNhs14088,CNhs14089,CNhs14090,CNhs14091,CNhs14092,CNhs14093,CNhs14094,CNhs14095,CNhs14097,CNhs14098,CNhs14099,CNhs14100,CNhs14101,CNhs14102,CNhs14103,CNhs14104,CNhs14105,CNhs14106,CNhs14107,CNhs14108,CNhs14109,CNhs14110,CNhs14111,CNhs14112,CNhs14113,CNhs14114,CNhs14115,CNhs14116,CNhs14117,CNhs14118,CNhs14119,CNhs14121,CNhs14122,CNhs14123,CNhs14124,CNhs14125,CNhs14126,CNhs14127
|description=mouse_macrophage_TB_infection_non-stimulated
|libraryids=CNhs11458,CNhs11459,CNhs11460,CNhs11461,CNhs11462,CNhs11463,CNhs11507,CNhs11508,CNhs11509,CNhs11510,CNhs11511,CNhs11533,CNhs11534,CNhs11535,CNhs11536,CNhs11537,CNhs11538,CNhs11582,CNhs11583,CNhs11584,CNhs11586,CNhs11633,CNhs11634,CNhs11635,CNhs11636,CNhs11637,CNhs14298,CNhs14299,CNhs14300,CNhs14301,CNhs14342,CNhs14347,CNhs14348,CNhs14349,CNhs14350,CNhs14351
|page_name=mouse_BMM_TB_infection_nonstimulated
|page_name=mouse_BMM_TB_infection_nonstimulated
|series=IN_VITRO DIFFERENTIATION SERIES
|series=IN_VITRO DIFFERENTIATION SERIES
|species=Mouse (Mus musculus)
|species=Mouse (Mus musculus)
|zenbu_config=https://fantom5-collaboration.gsc.riken.jp/zenbu/gLyphs/#config
|zenbu_config=http://fantom.gsc.riken.jp/zenbu/gLyphs/#config=sPGnQ-H0OxLoGP-W2fl-J
}}
}}

Revision as of 19:52, 16 September 2014

Series:IN_VITRO DIFFERENTIATION SERIES
Species:Mouse (Mus musculus)
Genomic View:Zenbu
Expression table:[{{{tet_config}}} FILE]
Link to TET:[{{{tet_file}}} TET]
Sample providers :Frank Brombacher
Germ layer:{{{germ_layer}}}
Primary cells or cell line:{{{primary_cells}}}
Time span:{{{time_span}}}
Number of time points:{{{number_time_points}}}


Overview

{{{TCOverview}}}

Sample description

{{{TCSample_description}}}

Quality control

{{{TCQuality_control}}}

Profiled time course samples

Only samples that passed quality controls (Arner et al. 2015) are shown here. The entire set of samples are downloadable from FANTOM5 human / mouse samples


3561-170B1macrophage, TB infection, non-stimulated BMDM, without Mtb024hrbiol_rep1
3562-170C1macrophage, TB infection, non-stimulated BMDM, without Mtb028hrbiol_rep1
3563-170D1macrophage, TB infection, non-stimulated BMDM, without Mtb036hrbiol_rep1
3564-170E1macrophage, TB infection, non-stimulated BMDM, without Mtb048hrbiol_rep1
3565-170F1macrophage, TB infection, non-stimulated BMDM, without Mtb072hrbiol_rep1
3566-170G1macrophage, TB infection, non-stimulated BMDM, without Mtb120hrbiol_rep1
3607-170C6macrophage, TB infection, non-stimulated BMDM, with Mtb028hr(004h after stimulation)biol_rep1
3608-170D6macrophage, TB infection, non-stimulated BMDM, with Mtb036hr(012h after stimulation)biol_rep1
3609-170E6macrophage, TB infection, non-stimulated BMDM, with Mtb048hr(024h after stimulation)biol_rep1
3610-170F6macrophage, TB infection, non-stimulated BMDM, with Mtb072hr(048h after stimulation)biol_rep1
3611-170G6macrophage, TB infection, non-stimulated BMDM, with Mtb120hr(096h after stimulation)biol_rep1
3633-171B1macrophage, TB infection, non-stimulated BMDM, without Mtb024hrbiol_rep2
3634-171C1macrophage, TB infection, non-stimulated BMDM, without Mtb028hrbiol_rep2
3635-171D1macrophage, TB infection, non-stimulated BMDM, without Mtb036hrbiol_rep2
3636-171E1macrophage, TB infection, non-stimulated BMDM, without Mtb048hrbiol_rep2
3637-171F1macrophage, TB infection, non-stimulated BMDM, without Mtb072hrbiol_rep2
3638-171G1macrophage, TB infection, non-stimulated BMDM, without Mtb120hrbiol_rep2
3679-171C6macrophage, TB infection, non-stimulated BMDM, with Mtb028hr(004h after stimulation)biol_rep2
3680-171D6macrophage, TB infection, non-stimulated BMDM, with Mtb036hr(012h after stimulation)biol_rep2
3681-171E6macrophage, TB infection, non-stimulated BMDM, with Mtb048hr(024h after stimulation)biol_rep2
3683-171G6macrophage, TB infection, non-stimulated BMDM, with Mtb120hr(096h after stimulation)biol_rep2
3705-172B1macrophage, TB infection, non-stimulated BMDM, without Mtb004hrbiol_rep3
3706-172C1macrophage, TB infection, non-stimulated BMDM, without Mtb006hrbiol_rep3
3707-172D1macrophage, TB infection, non-stimulated BMDM, without Mtb012hrbiol_rep3
3708-172E1macrophage, TB infection, non-stimulated BMDM, without Mtb024hrbiol_rep3
3709-172F1macrophage, TB infection, non-stimulated BMDM, without Mtb028hrbiol_rep3
3710-172G1macrophage, TB infection, non-stimulated BMDM, without Mtb036hrbiol_rep3
3711-172H1macrophage, TB infection, non-stimulated BMDM, without Mtb048hrbiol_rep3
3712-172I1macrophage, TB infection, non-stimulated BMDM, without Mtb072hrbiol_rep3
3713-172A2macrophage, TB infection, non-stimulated BMDM, without Mtb120hrbiol_rep3
3967-173D4macrophage, TB infection, non-stimulated BMDM, without Mtb024hrbiol_rep4
3972-173I4macrophage, TB infection, non-stimulated BMDM, with Mtb028hr(004h after stimulation)biol_rep4
3973-173A5macrophage, TB infection, non-stimulated BMDM, with Mtb036hr(012h after stimulation)biol_rep4
3974-173B5macrophage, TB infection, non-stimulated BMDM, with Mtb048hr(024h after stimulation)biol_rep4
3975-173C5macrophage, TB infection, non-stimulated BMDM, with Mtb072hr(048h after stimulation)biol_rep4
3976-173D5macrophage, TB infection, non-stimulated BMDM, with Mtb120hr(096h after stimulation)biol_rep4
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