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{{CL
{{CL
|id=CL:0000008
|alt_id=
|name=cranial neural crest cell
|namespace=cell
|def=
|xref=
|is_a=CL:0000333
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000008
|is_a=CL:0000333
|is_obsolete=
|located_in=
|located_in=
|name=migratory cranial neural crest cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:27, 12 September 2014

Name:migratory cranial neural crest cell
Namespace:FANTOM


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000333(migratory neural crest cell)



Children


develops from:CL:0000005 (fibroblast neural crest derived),CL:0002363 (keratocyte)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000008 (migratory cranial neural crest cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr3:52362029..52362031,+#_de8f56501583400bf1d8c5036f3c21d4p@chr3:52362029..52362031, +
1.55e-98FFCP PHASE2:Hg19::chr7:150910973..150910976,-#_de8f56501583400bf1d8c5036f3c21d4p@chr7:150910973..150910976, -
1.55e-98FFCP PHASE1:Hg19::chr7:150910973..150910976,-#_de8f56501583400bf1d8c5036f3c21d4p@chr7:150910973..150910976, -
1.55e-98FFCP PHASE2:Hg19::chr3:52362029..52362031,+#_de8f56501583400bf1d8c5036f3c21d4p@chr3:52362029..52362031, +
4.52e-50FFCP PHASE2:Hg19::chr6:113369869..113369877,+#_698c99a4d99722d3e2a6b13c5045d942p@chr6:113369869..113369877, +
4.52e-50FFCP PHASE1:Hg19::chr10:92617531..92617541,-#_698c99a4d99722d3e2a6b13c5045d942p8@HTR7
4.52e-50FFCP PHASE2:Hg19::chr10:92617531..92617541,-#_698c99a4d99722d3e2a6b13c5045d942p8@HTR7
4.52e-50FFCP PHASE1:Hg19::chr6:113369869..113369877,+#_698c99a4d99722d3e2a6b13c5045d942p@chr6:113369869..113369877, +
4.52e-50FFCP PHASE2:Hg19::chr15:49255230..49255248,-#_698c99a4d99722d3e2a6b13c5045d942p16@SHC4
4.52e-50FFCP PHASE1:Hg19::chr15:49255230..49255248,-#_698c99a4d99722d3e2a6b13c5045d942p16@SHC4
4.52e-50FFCP PHASE2:Hg19::chr8:22932230..22932233,-#_698c99a4d99722d3e2a6b13c5045d942p5@ENST00000520840, p5@ENST00000523806
4.52e-50FFCP PHASE1:Hg19::chr8:22932230..22932233,-#_698c99a4d99722d3e2a6b13c5045d942p5@ENST00000520840, p5@ENST00000523806
5.04e-34FFCP PHASE1:Hg19::chr6:151770193..151770196,-#_690c9aa4b8e66dd312629c979c44b0e6p@chr6:151770193..151770196, -
5.04e-34FFCP PHASE2:Hg19::chr21:47410794..47410799,+#_690c9aa4b8e66dd312629c979c44b0e6p@chr21:47410794..47410799, +
5.04e-34FFCP PHASE1:Hg19::chr21:47410794..47410799,+#_690c9aa4b8e66dd312629c979c44b0e6p@chr21:47410794..47410799, +
5.04e-34FFCP PHASE2:Hg19::chr1:44820685..44820695,-#_690c9aa4b8e66dd312629c979c44b0e6p10@ERI3
5.04e-34FFCP PHASE2:Hg19::chr6:151770193..151770196,-#_690c9aa4b8e66dd312629c979c44b0e6p@chr6:151770193..151770196, -
5.04e-34FFCP PHASE1:Hg19::chr1:44820685..44820695,-#_690c9aa4b8e66dd312629c979c44b0e6p10@ERI3
7.05e-34FFCP PHASE2:Hg19::chr5:79375654..79375674,+#_58b9a61358f3ea7001b24211b090540fp@chr5:79375654..79375674, +
7.05e-34FFCP PHASE1:Hg19::chr11:65265332..65265342,+#_58b9a61358f3ea7001b24211b090540fp19@MALAT1
7.05e-34FFCP PHASE1:Hg19::chr5:79375654..79375674,+#_58b9a61358f3ea7001b24211b090540fp@chr5:79375654..79375674, +
7.05e-34FFCP PHASE2:Hg19::chr15:101459410..101459421,-#_58b9a61358f3ea7001b24211b090540fp2@ENST00000560068
7.05e-34FFCP PHASE1:Hg19::chr15:101459410..101459421,-#_58b9a61358f3ea7001b24211b090540fp2@ENST00000560068
7.05e-34FFCP PHASE2:Hg19::chr11:65265332..65265342,+#_58b9a61358f3ea7001b24211b090540fp19@MALAT1
7.05e-34FFCP PHASE2:Hg19::chr2:25383828..25383855,-#_58b9a61358f3ea7001b24211b090540fp4@POMC
7.05e-34FFCP PHASE1:Hg19::chr10:43133595..43133606,-#_58b9a61358f3ea7001b24211b090540fp@chr10:43133595..43133606, -
7.05e-34FFCP PHASE2:Hg19::chr10:43133595..43133606,-#_58b9a61358f3ea7001b24211b090540fp@chr10:43133595..43133606, -
7.05e-34FFCP PHASE2:Hg19::chr1:9970194..9970195,-#_58b9a61358f3ea7001b24211b090540fp14@CTNNBIP1
7.05e-34FFCP PHASE1:Hg19::chr10:74020629..74020634,-#_58b9a61358f3ea7001b24211b090540fp@chr10:74020629..74020634, -
7.05e-34FFCP PHASE1:Hg19::chr2:25383828..25383855,-#_58b9a61358f3ea7001b24211b090540fp4@POMC
7.05e-34FFCP PHASE2:Hg19::chr10:74020629..74020634,-#_58b9a61358f3ea7001b24211b090540fp@chr10:74020629..74020634, -
7.05e-34FFCP PHASE1:Hg19::chr1:9970194..9970195,-#_58b9a61358f3ea7001b24211b090540fp14@CTNNBIP1
6.41e-31FFCP PHASE1:Hg19::chr4:111536534..111536575,-#_a91b0c4e9e0f5138b67665d44c62801cp1@ENST00000503456
6.41e-31FFCP PHASE2:Hg19::chr4:111536534..111536575,-#_a91b0c4e9e0f5138b67665d44c62801cp1@ENST00000503456
4.55e-29FFCP PHASE1:Hg19::chrX:19688475..19688492,-#_d90be370fdbf8ef518cf2bd2e9ccfef5p26@SH3KBP1
4.55e-29FFCP PHASE2:Hg19::chrX:19688475..19688492,-#_d90be370fdbf8ef518cf2bd2e9ccfef5p26@SH3KBP1
9.18e-26FFCP PHASE2:Hg19::chr4:73434498..73434509,-#_d962b3c078c41127eabf14d17aae6188p6@ADAMTS3
9.18e-26FFCP PHASE1:Hg19::chr10:86153606..86153623,+#_d962b3c078c41127eabf14d17aae6188p9@FAM190B
9.18e-26FFCP PHASE1:Hg19::chr17:30185971..30185986,-#_d962b3c078c41127eabf14d17aae6188p7@C17orf79
9.18e-26FFCP PHASE2:Hg19::chr10:86153606..86153623,+#_d962b3c078c41127eabf14d17aae6188p9@FAM190B
9.18e-26FFCP PHASE2:Hg19::chr17:30185971..30185986,-#_d962b3c078c41127eabf14d17aae6188p7@C17orf79
9.18e-26FFCP PHASE2:Hg19::chr12:53693440..53693450,-#_d962b3c078c41127eabf14d17aae6188p2@CU687581
9.18e-26FFCP PHASE1:Hg19::chr11:34073641..34073656,-#_d962b3c078c41127eabf14d17aae6188p@chr11:34073641..34073656, -
9.18e-26FFCP PHASE2:Hg19::chr1:93646042..93646043,-#_d962b3c078c41127eabf14d17aae6188p7@TMED5
9.18e-26FFCP PHASE2:Hg19::chr11:34073641..34073656,-#_d962b3c078c41127eabf14d17aae6188p@chr11:34073641..34073656, -
9.18e-26FFCP PHASE2:Hg19::chr20:60758060..60758074,-#_d962b3c078c41127eabf14d17aae6188p@chr20:60758060..60758074, -
9.18e-26FFCP PHASE2:Hg19::chr1:151171326..151171337,-#_d962b3c078c41127eabf14d17aae6188p@chr1:151171326..151171337, -
9.18e-26FFCP PHASE1:Hg19::chr1:93646042..93646043,-#_d962b3c078c41127eabf14d17aae6188p7@TMED5
9.18e-26FFCP PHASE2:Hg19::chr7:6049190..6049209,+#_d962b3c078c41127eabf14d17aae6188p@chr7:6049190..6049209, +
9.18e-26FFCP PHASE2:Hg19::chr4:120546882..120546885,-#_d962b3c078c41127eabf14d17aae6188p@chr4:120546882..120546885, -
9.18e-26FFCP PHASE2:Hg19::chr1:179335101..179335112,+#_d962b3c078c41127eabf14d17aae6188p6@AXDND1
9.18e-26FFCP PHASE1:Hg19::chr4:73434498..73434509,-#_d962b3c078c41127eabf14d17aae6188p6@ADAMTS3
9.18e-26FFCP PHASE1:Hg19::chr20:60758060..60758074,-#_d962b3c078c41127eabf14d17aae6188p@chr20:60758060..60758074, -
9.18e-26FFCP PHASE2:Hg19::chr3:9956047..9956079,+#_d962b3c078c41127eabf14d17aae6188p@chr3:9956047..9956079, +
9.18e-26FFCP PHASE2:Hg19::chr1:36024782..36024791,+#_d962b3c078c41127eabf14d17aae6188p4@AB383919
9.18e-26FFCP PHASE1:Hg19::chr7:6049190..6049209,+#_d962b3c078c41127eabf14d17aae6188p@chr7:6049190..6049209, +
9.18e-26FFCP PHASE1:Hg19::chr4:120546882..120546885,-#_d962b3c078c41127eabf14d17aae6188p@chr4:120546882..120546885, -
9.18e-26FFCP PHASE1:Hg19::chr1:179335101..179335112,+#_d962b3c078c41127eabf14d17aae6188p6@AXDND1
9.18e-26FFCP PHASE1:Hg19::chr3:9956047..9956079,+#_d962b3c078c41127eabf14d17aae6188p@chr3:9956047..9956079, +
9.18e-26FFCP PHASE1:Hg19::chr1:151171326..151171337,-#_d962b3c078c41127eabf14d17aae6188p@chr1:151171326..151171337, -
9.18e-26FFCP PHASE2:Hg19::chr21:47681190..47681194,-#_d962b3c078c41127eabf14d17aae6188p@chr21:47681190..47681194, -
9.18e-26FFCP PHASE2:Hg19::chr16:10590513..10590515,-#_d962b3c078c41127eabf14d17aae6188p@chr16:10590513..10590515, -
9.18e-26FFCP PHASE1:Hg19::chr1:36024782..36024791,+#_d962b3c078c41127eabf14d17aae6188p4@AB383919
9.18e-26FFCP PHASE1:Hg19::chr16:10590513..10590515,-#_d962b3c078c41127eabf14d17aae6188p@chr16:10590513..10590515, -
9.18e-26FFCP PHASE2:Hg19::chr4:57522753..57522760,-#_d962b3c078c41127eabf14d17aae6188p18@HOPX
9.18e-26FFCP PHASE2:Hg19::chr15:90344775..90344794,+#_d962b3c078c41127eabf14d17aae6188p@chr15:90344775..90344794, +
9.18e-26FFCP PHASE1:Hg19::chr21:47681190..47681194,-#_d962b3c078c41127eabf14d17aae6188p@chr21:47681190..47681194, -
9.18e-26FFCP PHASE1:Hg19::chr15:90344775..90344794,+#_d962b3c078c41127eabf14d17aae6188p@chr15:90344775..90344794, +
9.18e-26FFCP PHASE2:Hg19::chr7:100806199..100806216,-#_d962b3c078c41127eabf14d17aae6188p@chr7:100806199..100806216, -
9.18e-26FFCP PHASE2:Hg19::chr2:219540880..219540912,+#_d962b3c078c41127eabf14d17aae6188p@chr2:219540880..219540912, +
9.18e-26FFCP PHASE1:Hg19::chr7:100806199..100806216,-#_d962b3c078c41127eabf14d17aae6188p@chr7:100806199..100806216, -
9.18e-26FFCP PHASE2:Hg19::chr21:47397571..47397582,-#_d962b3c078c41127eabf14d17aae6188p@chr21:47397571..47397582, -
9.18e-26FFCP PHASE1:Hg19::chr2:219540880..219540912,+#_d962b3c078c41127eabf14d17aae6188p@chr2:219540880..219540912, +
9.18e-26FFCP PHASE1:Hg19::chr12:53693440..53693450,-#_d962b3c078c41127eabf14d17aae6188p2@CU687581
9.18e-26FFCP PHASE1:Hg19::chr4:57522753..57522760,-#_d962b3c078c41127eabf14d17aae6188p18@HOPX
9.18e-26FFCP PHASE1:Hg19::chr21:47397571..47397582,-#_d962b3c078c41127eabf14d17aae6188p@chr21:47397571..47397582, -
6.02e-24FFCP PHASE1:Hg19::chr1:145589059..145589070,-#_de76a7859b395c88eb0a42bc1e05a086p3@NUDT17
6.02e-24FFCP PHASE2:Hg19::chr1:145589059..145589070,-#_de76a7859b395c88eb0a42bc1e05a086p3@NUDT17
3.81e-21FFCP PHASE1:Hg19::chr17:19648416..19648426,-#_02c48ca2ab8b04f7806566d3f0548863p13@ALDH3A1
3.81e-21FFCP PHASE2:Hg19::chr17:19648416..19648426,-#_02c48ca2ab8b04f7806566d3f0548863p13@ALDH3A1
4.66e-21FFCP PHASE2:Hg19::chr6:41562324..41562340,+#_e3200638959e8a970de3b5a6ad1d22d0p16@FOXP4
4.66e-21FFCP PHASE1:Hg19::chr6:41562324..41562340,+#_e3200638959e8a970de3b5a6ad1d22d0p16@FOXP4
4.66e-21FFCP PHASE2:Hg19::chr4:52917466..52917498,-#_e3200638959e8a970de3b5a6ad1d22d0p@chr4:52917466..52917498, -
4.66e-21FFCP PHASE1:Hg19::chr4:52917466..52917498,-#_e3200638959e8a970de3b5a6ad1d22d0p@chr4:52917466..52917498, -
5.7e-21FFCP PHASE2:Hg19::chr12:58141331..58141342,+#_a5f5e3c6a9c412a1df522fea6212b19ap@chr12:58141331..58141342, +
5.7e-21FFCP PHASE1:Hg19::chr19:48244695..48244702,+#_a5f5e3c6a9c412a1df522fea6212b19ap14@EHD2
5.7e-21FFCP PHASE2:Hg19::chr5:142254452..142254462,+#_a5f5e3c6a9c412a1df522fea6212b19ap29@ARHGAP26
5.7e-21FFCP PHASE1:Hg19::chr5:142254452..142254462,+#_a5f5e3c6a9c412a1df522fea6212b19ap29@ARHGAP26
5.7e-21FFCP PHASE2:Hg19::chr7:73118172..73118185,-#_a5f5e3c6a9c412a1df522fea6212b19ap3@STX1A
5.7e-21FFCP PHASE1:Hg19::chr7:73118172..73118185,-#_a5f5e3c6a9c412a1df522fea6212b19ap3@STX1A
5.7e-21FFCP PHASE2:Hg19::chr8:27686258..27686262,-#_a5f5e3c6a9c412a1df522fea6212b19ap@chr8:27686258..27686262, -
5.7e-21FFCP PHASE2:Hg19::chr19:48244695..48244702,+#_a5f5e3c6a9c412a1df522fea6212b19ap14@EHD2
5.7e-21FFCP PHASE1:Hg19::chr8:27686258..27686262,-#_a5f5e3c6a9c412a1df522fea6212b19ap@chr8:27686258..27686262, -
5.7e-21FFCP PHASE1:Hg19::chr12:58141331..58141342,+#_a5f5e3c6a9c412a1df522fea6212b19ap@chr12:58141331..58141342, +
6.96e-21FFCP PHASE2:Hg19::chr15:90348577..90348582,-#_6a7b90441b6f5260bc0f9485ecedfb3dp34@ANPEP
6.96e-21FFCP PHASE1:Hg19::chr15:90348577..90348582,-#_6a7b90441b6f5260bc0f9485ecedfb3dp34@ANPEP
6.96e-21FFCP PHASE2:Hg19::chr4:111563076..111563124,-#_6a7b90441b6f5260bc0f9485ecedfb3dp8@PITX2
6.96e-21FFCP PHASE2:Hg19::chr12:102455905..102455915,-#_6a7b90441b6f5260bc0f9485ecedfb3dp5@CCDC53
6.96e-21FFCP PHASE2:Hg19::chr2:37898966..37898999,+#_6a7b90441b6f5260bc0f9485ecedfb3dp@chr2:37898966..37898999, +
6.96e-21FFCP PHASE1:Hg19::chr17:45144823..45144834,-#_6a7b90441b6f5260bc0f9485ecedfb3dp@chr17:45144823..45144834, -

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