Personal tools

CL:0000199

From FANTOM5_SSTAR

Revision as of 08:24, 26 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search
Name:mechanoreceptor cell
Namespace:cell
Definition:"A cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system." [MESH:A.08.800.550.700.500]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000006(neuronal receptor cell)



Children


is a:CL:0000855 (sensory hair cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000199 (mechanoreceptor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr3:127520184..127520191,-#_226491ab2d1222970ccaee28dec49830p@chr3:127520184..127520191, -
3.07e-86FFCP PHASE2:Mm9::chr4:106770202..106770208,+#_226491ab2d1222970ccaee28dec49830p@chr4:106770202..106770208, +
3.07e-86FFCP PHASE1:Mm9::chr6:36966723..36966734,-#_226491ab2d1222970ccaee28dec49830p@chr6:36966723..36966734, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185389..34185401,+#_226491ab2d1222970ccaee28dec49830p8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr18:66033513..66033517,-#_226491ab2d1222970ccaee28dec49830p@chr18:66033513..66033517, -
3.07e-86FFCP PHASE1:Mm9::chr6:64684637..64684654,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684637..64684654, +
3.07e-86FFCP PHASE2:Mm9::chr2:180335744..180335746,+#_226491ab2d1222970ccaee28dec49830p@chr2:180335744..180335746, +
3.07e-86FFCP PHASE2:Mm9::chr2:12032746..12032751,-#_226491ab2d1222970ccaee28dec49830p@chr2:12032746..12032751, -
3.07e-86FFCP PHASE1:Mm9::chr2:142906965..142906982,-#_226491ab2d1222970ccaee28dec49830p@chr2:142906965..142906982, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185378..34185383,+#_226491ab2d1222970ccaee28dec49830p11@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr2:53464193..53464197,+#_226491ab2d1222970ccaee28dec49830p@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr11:94371110..94371111,-#_226491ab2d1222970ccaee28dec49830p@chr11:94371110..94371111, -
3.07e-86FFCP PHASE2:Mm9::chr3:127520184..127520191,-#_226491ab2d1222970ccaee28dec49830p@chr3:127520184..127520191, -
3.07e-86FFCP PHASE2:Mm9::chr16:55283394..55283400,-#_226491ab2d1222970ccaee28dec49830p1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr6:83129695..83129696,+#_226491ab2d1222970ccaee28dec49830p24@Dctn1
3.07e-86FFCP PHASE1:Mm9::chr15:91379135..91379143,-#_226491ab2d1222970ccaee28dec49830p@chr15:91379135..91379143, -
3.07e-86FFCP PHASE1:Mm9::chr6:36966993..36966996,-#_226491ab2d1222970ccaee28dec49830p@chr6:36966993..36966996, -
3.07e-86FFCP PHASE1:Mm9::chr16:55283394..55283400,-#_226491ab2d1222970ccaee28dec49830p1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr6:36966723..36966734,-#_226491ab2d1222970ccaee28dec49830p@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:92087990..92087995,+#_226491ab2d1222970ccaee28dec49830p3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr10:18246142..18246145,+#_226491ab2d1222970ccaee28dec49830p@chr10:18246142..18246145, +
3.07e-86FFCP PHASE2:Mm9::chr5:72652671..72652676,+#_226491ab2d1222970ccaee28dec49830p@chr5:72652671..72652676, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684692..64684697,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684692..64684697, +
3.07e-86FFCP PHASE1:Mm9::chr2:142907424..142907448,-#_226491ab2d1222970ccaee28dec49830p@chr2:142907424..142907448, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185389..34185401,+#_226491ab2d1222970ccaee28dec49830p8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr19:10535924..10535927,-#_226491ab2d1222970ccaee28dec49830p@chr19:10535924..10535927, -
3.07e-86FFCP PHASE2:Mm9::chr2:142906965..142906982,-#_226491ab2d1222970ccaee28dec49830p@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185343..34185356,+#_226491ab2d1222970ccaee28dec49830p7@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr6:64684505..64684512,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684505..64684512, +
3.07e-86FFCP PHASE2:Mm9::chr11:114652018..114652020,+#_226491ab2d1222970ccaee28dec49830p@chr11:114652018..114652020, +
3.07e-86FFCP PHASE2:Mm9::chr6:36966993..36966996,-#_226491ab2d1222970ccaee28dec49830p@chr6:36966993..36966996, -
3.07e-86FFCP PHASE1:Mm9::chr15:97828021..97828028,-#_226491ab2d1222970ccaee28dec49830p@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr9:87599703..87599714,-#_226491ab2d1222970ccaee28dec49830p@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr11:94371110..94371111,-#_226491ab2d1222970ccaee28dec49830p@chr11:94371110..94371111, -
3.07e-86FFCP PHASE2:Mm9::chr19:10535924..10535927,-#_226491ab2d1222970ccaee28dec49830p@chr19:10535924..10535927, -
3.07e-86FFCP PHASE2:Mm9::chr17:15466888..15466898,-#_226491ab2d1222970ccaee28dec49830p@chr17:15466888..15466898, -
3.07e-86FFCP PHASE1:Mm9::chr6:83129695..83129696,+#_226491ab2d1222970ccaee28dec49830p24@Dctn1
3.07e-86FFCP PHASE1:Mm9::chr4:106770202..106770208,+#_226491ab2d1222970ccaee28dec49830p@chr4:106770202..106770208, +
3.07e-86FFCP PHASE1:Mm9::chr2:12032746..12032751,-#_226491ab2d1222970ccaee28dec49830p@chr2:12032746..12032751, -
3.07e-86FFCP PHASE1:Mm9::chr9:92087990..92087995,+#_226491ab2d1222970ccaee28dec49830p3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr18:66033513..66033517,-#_226491ab2d1222970ccaee28dec49830p@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr15:91379135..91379143,-#_226491ab2d1222970ccaee28dec49830p@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr2:142907424..142907448,-#_226491ab2d1222970ccaee28dec49830p@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185362..34185370,+#_226491ab2d1222970ccaee28dec49830p10@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr6:64684637..64684654,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684637..64684654, +
3.07e-86FFCP PHASE1:Mm9::chr17:15466888..15466898,-#_226491ab2d1222970ccaee28dec49830p@chr17:15466888..15466898, -
3.07e-86FFCP PHASE1:Mm9::chr13:31171742..31171745,-#_226491ab2d1222970ccaee28dec49830p@chr13:31171742..31171745, -
3.07e-86FFCP PHASE1:Mm9::chr8:94283075..94283082,+#_226491ab2d1222970ccaee28dec49830p@chr8:94283075..94283082, +
3.07e-86FFCP PHASE1:Mm9::chr10:18246142..18246145,+#_226491ab2d1222970ccaee28dec49830p@chr10:18246142..18246145, +
3.07e-86FFCP PHASE2:Mm9::chr17:34185343..34185356,+#_226491ab2d1222970ccaee28dec49830p7@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr11:114652018..114652020,+#_226491ab2d1222970ccaee28dec49830p@chr11:114652018..114652020, +
3.07e-86FFCP PHASE2:Mm9::chr8:94283075..94283082,+#_226491ab2d1222970ccaee28dec49830p@chr8:94283075..94283082, +
3.07e-86FFCP PHASE2:Mm9::chr2:53464193..53464197,+#_226491ab2d1222970ccaee28dec49830p@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr17:34185378..34185383,+#_226491ab2d1222970ccaee28dec49830p11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr6:64684692..64684697,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684692..64684697, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684505..64684512,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684505..64684512, +
3.07e-86FFCP PHASE1:Mm9::chr2:180335744..180335746,+#_226491ab2d1222970ccaee28dec49830p@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr9:87599703..87599714,-#_226491ab2d1222970ccaee28dec49830p@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr13:31171742..31171745,-#_226491ab2d1222970ccaee28dec49830p@chr13:31171742..31171745, -
3.07e-86FFCP PHASE1:Mm9::chr5:72652671..72652676,+#_226491ab2d1222970ccaee28dec49830p@chr5:72652671..72652676, +
3.07e-86FFCP PHASE2:Mm9::chr17:34185362..34185370,+#_226491ab2d1222970ccaee28dec49830p10@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr15:97828021..97828028,-#_226491ab2d1222970ccaee28dec49830p@chr15:97828021..97828028, -
2.74e-44FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_1144a0c613541f30449e34f02cb67b7cp@chr6:29428397..29428407, -
2.74e-44FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_1144a0c613541f30449e34f02cb67b7cp@chr1:172843847..172843880, -
2.74e-44FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_1144a0c613541f30449e34f02cb67b7cp@chr5:150945209..150945220, +
2.74e-44FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_1144a0c613541f30449e34f02cb67b7cp@chr17:13983160..13983167, +
2.74e-44FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_1144a0c613541f30449e34f02cb67b7cp@chr1:182528388..182528403, +
2.74e-44FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_1144a0c613541f30449e34f02cb67b7cp1@Kncn
2.74e-44FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_1144a0c613541f30449e34f02cb67b7cp@chr16:93971357..93971363, -
2.74e-44FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_1144a0c613541f30449e34f02cb67b7cp@chr10:67371994..67372010, +
2.74e-44FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_1144a0c613541f30449e34f02cb67b7cp@chr6:86746562..86746579, -
2.74e-44FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_1144a0c613541f30449e34f02cb67b7cp3@Kncn
2.74e-44FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_1144a0c613541f30449e34f02cb67b7cp@chrX:154140781..154140788, +
2.74e-44FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_1144a0c613541f30449e34f02cb67b7cp@chr11:11599532..11599539, -
2.74e-44FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_1144a0c613541f30449e34f02cb67b7cp1@Tmprss7
2.74e-44FFCP PHASE2:Mm9::chr13:31877112..31877122,+#_1144a0c613541f30449e34f02cb67b7cp@chr13:31877112..31877122, +
2.74e-44FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_1144a0c613541f30449e34f02cb67b7cp6@Fam70b
2.74e-44FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_1144a0c613541f30449e34f02cb67b7cp@chr13:78257454..78257465, +
2.74e-44FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_1144a0c613541f30449e34f02cb67b7cp@chr17:13983160..13983167, +
2.74e-44FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_1144a0c613541f30449e34f02cb67b7cp1@Tmc1
2.74e-44FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_1144a0c613541f30449e34f02cb67b7cp2@Fscn2
2.74e-44FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_1144a0c613541f30449e34f02cb67b7cp@chr2:128881546..128881553, -
2.74e-44FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_1144a0c613541f30449e34f02cb67b7cp@chr14:31283072..31283081, -
2.74e-44FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_1144a0c613541f30449e34f02cb67b7cp@chr9:66860888..66860899, +
2.74e-44FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_1144a0c613541f30449e34f02cb67b7cp3@Gipc3
2.74e-44FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_1144a0c613541f30449e34f02cb67b7cp@chr5:3909310..3909321, +
2.74e-44FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_1144a0c613541f30449e34f02cb67b7cp3@Strc
2.74e-44FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_1144a0c613541f30449e34f02cb67b7cp@chr13:43699188..43699216, +
2.74e-44FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_1144a0c613541f30449e34f02cb67b7cp@chr12:109905399..109905416, +
2.74e-44FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_1144a0c613541f30449e34f02cb67b7cp4@BC030867
2.74e-44FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_1144a0c613541f30449e34f02cb67b7cp@chr2:73232344..73232356, -
2.74e-44FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_1144a0c613541f30449e34f02cb67b7cp7@Pkn3
2.74e-44FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_1144a0c613541f30449e34f02cb67b7cp@chr11:75421384..75421397, +
2.74e-44FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_1144a0c613541f30449e34f02cb67b7cp@chr5:150945209..150945220, +
2.74e-44FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_1144a0c613541f30449e34f02cb67b7cp@chr6:86745686..86745727, -
2.74e-44FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_1144a0c613541f30449e34f02cb67b7cp@chr17:27252925..27252939, +
2.74e-44FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_1144a0c613541f30449e34f02cb67b7cp@chr5:72652660..72652667, +
2.74e-44FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_1144a0c613541f30449e34f02cb67b7cp@chr11:4689837..4689845, -
2.74e-44FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_1144a0c613541f30449e34f02cb67b7cp@chr1:194818647..194818660, -
2.74e-44FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_1144a0c613541f30449e34f02cb67b7cp10@Otof