CL:0000359
From FANTOM5_SSTAR
Name: | vascular associated smooth muscle cell |
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Namespace: | FANTOM |
Definition: | "A smooth muscle cell assocatiated with the vasculature." [GOC:dsd, GOC:tfm] |
Synonyms: |
"vascular smooth muscle cell" EXACT [] "VSMC" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000192(smooth muscle cell) |
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part_of: | UBERON:0002049(vasculature) |
Children
is a: | CL:0002539 (aortic smooth muscle cell),CL:0002588 (smooth muscle cell of the umbilical vein),CL:0002589 (smooth muscle cell of the brachiocephalic vasculature),CL:0002590 (smooth muscle cell of the brain vasculature),CL:0002591 (smooth muscle cell of the pulmonary artery),CL:0002592 (smooth muscle cell of the coronary artery),CL:0002594 (smooth muscle cell of the umbilical artery),CL:0002595 (smooth muscle cell of the subclavian artery),CL:0002596 (smooth muscle cell of the carotid artery) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11234-116D1 (Smooth Muscle Cells - Brain Vascular, donor1)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11284-116I6 (Smooth Muscle Cells - Brachiocephalic, donor1)
- 11285-116I7 (Smooth Muscle Cells - Carotid, donor1)
- 11286-116I8 (Smooth Muscle Cells - Coronary Artery, donor1)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11288-117A1 (Smooth Muscle Cells - Pulmonary Artery, donor1)
... further results Mouse (Mus musculus)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11234-116D1 (Smooth Muscle Cells - Brain Vascular, donor1)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11284-116I6 (Smooth Muscle Cells - Brachiocephalic, donor1)
- 11285-116I7 (Smooth Muscle Cells - Carotid, donor1)
- 11286-116I8 (Smooth Muscle Cells - Coronary Artery, donor1)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11288-117A1 (Smooth Muscle Cells - Pulmonary Artery, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000359 (vascular associated smooth muscle cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
5.38e-95 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_9ab53d05419d0af5bf33aed6e36051c6 | p@chr6:53359400..53359406, + |
5.38e-95 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_9ab53d05419d0af5bf33aed6e36051c6 | p@chr6:53359400..53359406, + |
1.58e-86 | FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_a0f90605a77bcc42b09e129dc098421d | p@chr17:14827154..14827169, - |
1.58e-86 | FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_a0f90605a77bcc42b09e129dc098421d | p@chr2:178190171..178190178, + |
1.58e-86 | FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_a0f90605a77bcc42b09e129dc098421d | p@chr17:14802633..14802637, - |
1.58e-86 | FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_a0f90605a77bcc42b09e129dc098421d | p@chr2:112043522..112043530, - |
1.58e-86 | FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_a0f90605a77bcc42b09e129dc098421d | p@chr17:14827154..14827169, - |
1.58e-86 | FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_a0f90605a77bcc42b09e129dc098421d | p@chr17:14802633..14802637, - |
1.58e-86 | FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_a0f90605a77bcc42b09e129dc098421d | p@chr17:87574327..87574332, + |
1.58e-86 | FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_a0f90605a77bcc42b09e129dc098421d | p@chr17:87574327..87574332, + |
1.58e-86 | FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_a0f90605a77bcc42b09e129dc098421d | p@chr2:112043522..112043530, - |
1.58e-86 | FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_a0f90605a77bcc42b09e129dc098421d | p@chrX:160839744..160839754, + |
1.58e-86 | FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_a0f90605a77bcc42b09e129dc098421d | p@chrX:160839744..160839754, + |
1.58e-86 | FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_a0f90605a77bcc42b09e129dc098421d | p@chr2:178190171..178190178, + |
1.58e-86 | FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_a0f90605a77bcc42b09e129dc098421d | p@chr8:69228447..69228492, + |
1.58e-86 | FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_a0f90605a77bcc42b09e129dc098421d | p5@Adamts2 |
1.58e-86 | FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_a0f90605a77bcc42b09e129dc098421d | p5@Adamts2 |
1.58e-86 | FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_a0f90605a77bcc42b09e129dc098421d | p@chr8:69228447..69228492, + |
2.3e-72 | FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_60ffac95fdd82899c361bef5158ed515 | p@chr4:74703497..74703511, + |
2.3e-72 | FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_60ffac95fdd82899c361bef5158ed515 | p@chr4:74703497..74703511, + |
3.38e-72 | FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_3d0bdc305f01acc9779f43f83eedc906 | p@chr4:7846444..7846449, - |
3.38e-72 | FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_3d0bdc305f01acc9779f43f83eedc906 | p@chr4:7846444..7846449, - |
8.96e-67 | FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_f6d8802bbb533f518d4b74fd31ae3b6a | p@chr11:102661517..102661541, - |
8.96e-67 | FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_f6d8802bbb533f518d4b74fd31ae3b6a | p@chr11:102661517..102661541, - |
1.33e-65 | FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_2e9b248b59526b8d37b7263b96780175 | p@chrX:160840025..160840037, + |
1.33e-65 | FFCP PHASE2:Mm9::chr6:128920492..128920498,-#_2e9b248b59526b8d37b7263b96780175 | p@chr6:128920492..128920498, - |
1.33e-65 | FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_2e9b248b59526b8d37b7263b96780175 | p@chrX:160840025..160840037, + |
1.33e-65 | FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_2e9b248b59526b8d37b7263b96780175 | p@chrX:160840048..160840057, + |
1.33e-65 | FFCP PHASE1:Mm9::chr6:128920492..128920498,-#_2e9b248b59526b8d37b7263b96780175 | p@chr6:128920492..128920498, - |
1.33e-65 | FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_2e9b248b59526b8d37b7263b96780175 | p@chrX:160840048..160840057, + |
1.33e-65 | FFCP PHASE2:Mm9::chr17:71340031..71340044,-#_2e9b248b59526b8d37b7263b96780175 | p5@Myl12b |
1.33e-65 | FFCP PHASE1:Mm9::chr11:118164535..118164544,-#_2e9b248b59526b8d37b7263b96780175 | p@chr11:118164535..118164544, - |
1.33e-65 | FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_2e9b248b59526b8d37b7263b96780175 | p6@Npy1r |
1.33e-65 | FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_2e9b248b59526b8d37b7263b96780175 | p6@Npy1r |
1.33e-65 | FFCP PHASE1:Mm9::chr17:71340031..71340044,-#_2e9b248b59526b8d37b7263b96780175 | p5@Myl12b |
1.33e-65 | FFCP PHASE2:Mm9::chr11:118164535..118164544,-#_2e9b248b59526b8d37b7263b96780175 | p@chr11:118164535..118164544, - |
2.21e-65 | FFCP PHASE2:Mm9::chr4:145000183..145000220,+#_5866c60d8be3f7cc97427622e317e0cc | p1@ENSMUST00000150529 |
2.21e-65 | FFCP PHASE1:Mm9::chr4:145000183..145000220,+#_5866c60d8be3f7cc97427622e317e0cc | p1@ENSMUST00000150529 |
2.31e-64 | FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_bbd24c603ba84263ec3989d49216a742 | p@chr2:134548872..134548879, - |
2.31e-64 | FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_bbd24c603ba84263ec3989d49216a742 | p@chr2:134548872..134548879, - |
7.84e-64 | FFCP PHASE1:Hg19::chr4:74703963..74703975,+#_bda5c86ef80f11ad326ac731baf6c3b3 | p@chr4:74703963..74703975, + |
7.84e-64 | FFCP PHASE2:Hg19::chr4:74703963..74703975,+#_bda5c86ef80f11ad326ac731baf6c3b3 | p@chr4:74703963..74703975, + |
3.26e-60 | FFCP PHASE1:Hg19::chr3:106484411..106484418,+#_2ac31ea89e8d660eed5df217b4db83f2 | p@chr3:106484411..106484418, + |
3.26e-60 | FFCP PHASE2:Hg19::chr3:106484411..106484418,+#_2ac31ea89e8d660eed5df217b4db83f2 | p@chr3:106484411..106484418, + |
3.28e-58 | FFCP PHASE1:Mm9::chr8:69857155..69857159,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chr8:69857155..69857159, + |
3.28e-58 | FFCP PHASE2:Mm9::chr8:69857155..69857159,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chr8:69857155..69857159, + |
3.28e-58 | FFCP PHASE1:Mm9::chr10:96946110..96946113,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chr10:96946110..96946113, + |
3.28e-58 | FFCP PHASE2:Mm9::chr14:24251697..24251707,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chr14:24251697..24251707, + |
3.28e-58 | FFCP PHASE2:Mm9::chr10:96946110..96946113,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chr10:96946110..96946113, + |
3.28e-58 | FFCP PHASE1:Mm9::chr17:87544959..87544962,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chr17:87544959..87544962, + |
3.28e-58 | FFCP PHASE2:Mm9::chr17:87544959..87544962,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chr17:87544959..87544962, + |
3.28e-58 | FFCP PHASE2:Mm9::chr17:78907550..78907557,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p8@Vit |
3.28e-58 | FFCP PHASE1:Mm9::chr1:127573425..127573432,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p12@Gpr39 |
3.28e-58 | FFCP PHASE2:Mm9::chr1:127573425..127573432,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p12@Gpr39 |
3.28e-58 | FFCP PHASE1:Mm9::chr17:78907550..78907557,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p8@Vit |
3.28e-58 | FFCP PHASE2:Mm9::chrX:160811352..160811356,-#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chrX:160811352..160811356, - |
3.28e-58 | FFCP PHASE2:Mm9::chrX:160839012..160839023,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chrX:160839012..160839023, + |
3.28e-58 | FFCP PHASE1:Mm9::chrX:160839012..160839023,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chrX:160839012..160839023, + |
3.28e-58 | FFCP PHASE2:Mm9::chr10:33816181..33816195,-#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chr10:33816181..33816195, - |
3.28e-58 | FFCP PHASE1:Mm9::chrX:160811352..160811356,-#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chrX:160811352..160811356, - |
3.28e-58 | FFCP PHASE1:Mm9::chr17:14817013..14817022,-#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chr17:14817013..14817022, - |
3.28e-58 | FFCP PHASE1:Mm9::chr10:33816181..33816195,-#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chr10:33816181..33816195, - |
3.28e-58 | FFCP PHASE1:Mm9::chr14:24251697..24251707,+#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chr14:24251697..24251707, + |
3.28e-58 | FFCP PHASE2:Mm9::chr17:14817013..14817022,-#_f8f3e3e47884a9cdc5a0113dff8c29fc | p@chr17:14817013..14817022, - |
7.95e-58 | FFCP PHASE1:Hg19::chr4:74702666..74702694,+#_de2d77139faed1fd606be91901dbbc32 | p3@CXCL6 |
7.95e-58 | FFCP PHASE2:Hg19::chr4:74702666..74702694,+#_de2d77139faed1fd606be91901dbbc32 | p3@CXCL6 |
2.3e-56 | FFCP PHASE2:Hg19::chr11:102661008..102661029,-#_a42b79300800b4827977fb1c49290c2d | p@chr11:102661008..102661029, - |
2.3e-56 | FFCP PHASE1:Hg19::chr11:102661008..102661029,-#_a42b79300800b4827977fb1c49290c2d | p@chr11:102661008..102661029, - |
2.36e-55 | FFCP PHASE2:Hg19::chr8:90556171..90556173,+#_f6a65b35be9dcbee70bb5cfea0b0a408 | p@chr8:90556171..90556173, + |
2.36e-55 | FFCP PHASE1:Hg19::chr8:90556171..90556173,+#_f6a65b35be9dcbee70bb5cfea0b0a408 | p@chr8:90556171..90556173, + |
3.26e-55 | FFCP PHASE1:Hg19::chr11:12182490..12182503,+#_aa33e114ca55a403d596be06faec69bb | p8@MICAL2 |
3.26e-55 | FFCP PHASE2:Hg19::chr11:12182490..12182503,+#_aa33e114ca55a403d596be06faec69bb | p8@MICAL2 |
1.96e-53 | FFCP PHASE1:Hg19::chr10:49813051..49813064,-#_839cdf666b4a5e7b9c899024fa92f40e | p4@ARHGAP22 |
1.96e-53 | FFCP PHASE2:Hg19::chr10:49813051..49813064,-#_839cdf666b4a5e7b9c899024fa92f40e | p4@ARHGAP22 |
4.9e-53 | FFCP PHASE1:Mm9::chr10:67821185..67821217,-#_96f42b384acb46afe83ca4ff9b594f15 | p@chr10:67821185..67821217, - |
4.9e-53 | FFCP PHASE1:Mm9::chr17:29227828..29227839,-#_96f42b384acb46afe83ca4ff9b594f15 | p@chr17:29227828..29227839, - |
4.9e-53 | FFCP PHASE2:Mm9::chr10:67821185..67821217,-#_96f42b384acb46afe83ca4ff9b594f15 | p@chr10:67821185..67821217, - |
4.9e-53 | FFCP PHASE2:Mm9::chr2:113589030..113589077,-#_96f42b384acb46afe83ca4ff9b594f15 | p@chr2:113589030..113589077, - |
4.9e-53 | FFCP PHASE1:Mm9::chr14:24251717..24251731,+#_96f42b384acb46afe83ca4ff9b594f15 | p@chr14:24251717..24251731, + |
4.9e-53 | FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_96f42b384acb46afe83ca4ff9b594f15 | p5@Npy1r |
4.9e-53 | FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_96f42b384acb46afe83ca4ff9b594f15 | p@chr10:67598037..67598049, - |
4.9e-53 | FFCP PHASE2:Mm9::chr14:24251717..24251731,+#_96f42b384acb46afe83ca4ff9b594f15 | p@chr14:24251717..24251731, + |
4.9e-53 | FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_96f42b384acb46afe83ca4ff9b594f15 | p5@Npy1r |
4.9e-53 | FFCP PHASE2:Mm9::chr17:29227828..29227839,-#_96f42b384acb46afe83ca4ff9b594f15 | p@chr17:29227828..29227839, - |
4.9e-53 | FFCP PHASE1:Mm9::chr13:113253807..113253846,+#_96f42b384acb46afe83ca4ff9b594f15 | p4@Il6st |
4.9e-53 | FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_96f42b384acb46afe83ca4ff9b594f15 | p@chr7:91081998..91082010, - |
4.9e-53 | FFCP PHASE2:Mm9::chr13:113253807..113253846,+#_96f42b384acb46afe83ca4ff9b594f15 | p4@Il6st |
4.9e-53 | FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_96f42b384acb46afe83ca4ff9b594f15 | p@chr10:67598037..67598049, - |
4.9e-53 | FFCP PHASE1:Mm9::chr2:113589030..113589077,-#_96f42b384acb46afe83ca4ff9b594f15 | p@chr2:113589030..113589077, - |
4.9e-53 | FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_96f42b384acb46afe83ca4ff9b594f15 | p@chr7:91081998..91082010, - |
7.35e-53 | FFCP PHASE1:Mm9::chr4:58219542..58219545,-#_91163fccf0d053cf86fd2e19a2d6cb4d | p11@Svep1 |
7.35e-53 | FFCP PHASE2:Mm9::chr4:58219542..58219545,-#_91163fccf0d053cf86fd2e19a2d6cb4d | p11@Svep1 |
8.3e-53 | FFCP PHASE1:Hg19::chr22:21138313..21138336,+#_f657530c5b76afa3d385f7bca11b5900 | p@chr22:21138313..21138336, + |
8.3e-53 | FFCP PHASE2:Hg19::chr22:21138313..21138336,+#_f657530c5b76afa3d385f7bca11b5900 | p@chr22:21138313..21138336, + |
1.1e-52 | FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_2cfddd2790937b7964de5402122fc7a9 | p@chrX:160838787..160838800, + |
1.1e-52 | FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_2cfddd2790937b7964de5402122fc7a9 | p@chrX:160838787..160838800, + |
1.65e-52 | FFCP PHASE2:Mm9::chr1:137662814..137662817,+#_db00ec93d7f736f48c7c94db79e5d5ff | p5@Phlda3 |
1.65e-52 | FFCP PHASE1:Mm9::chr1:137662814..137662817,+#_db00ec93d7f736f48c7c94db79e5d5ff | p5@Phlda3 |
2.71e-52 | FFCP PHASE1:Hg19::chr4:74736382..74736398,+#_2ef6f9ce46b8c0a8905593bfdccac379 | p@chr4:74736382..74736398, + |
2.71e-52 | FFCP PHASE2:Hg19::chr4:74736382..74736398,+#_2ef6f9ce46b8c0a8905593bfdccac379 | p@chr4:74736382..74736398, + |