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Revision as of 08:38, 15 June 2012

Name:gut absorptive cell
Namespace:cell
Definition:"Cell of the intestinal epithelium with a brush border made up of many parallel packed microvilli; associated with absorption, particularly of macromolecules." [JB:jb]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000212(absorptive cell)



Children


is a:CL:0000584 (enterocyte)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11848-124I3 (CD326+ enterocyte, pool1)
  • 11849-124I4 (CD326+ enterocyte, pool2)
  • 11850-124I5 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11851-124I6 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2)
  • 11852-124I7 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11853-124I8 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2)

Mouse (Mus musculus)

  • 11848-124I3 (CD326+ enterocyte, pool1)
  • 11849-124I4 (CD326+ enterocyte, pool2)
  • 11850-124I5 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11851-124I6 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2)
  • 11852-124I7 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11853-124I8 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000677 (gut absorptive cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
3.74e-65FFCP PHASE2:Mm9::chr9:50547790..50547793,+#_7ec39593027fee3c99194747b337bce3p@chr9:50547790..50547793, +
3.74e-65FFCP PHASE1:Mm9::chr9:50547790..50547793,+#_7ec39593027fee3c99194747b337bce3p@chr9:50547790..50547793, +
6.21e-65FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_bdf0c31b410eeb6de7284c8e455b7e2dp@chr8:122335239..122335244, +
6.21e-65FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_bdf0c31b410eeb6de7284c8e455b7e2dp@chr8:122335239..122335244, +
2.15e-58FFCP PHASE2:Mm9::chr12:79850576..79850587,-#_edb4888f9c8ed913da6650546b24519bp@chr12:79850576..79850587, -
2.15e-58FFCP PHASE1:Mm9::chr12:79850576..79850587,-#_edb4888f9c8ed913da6650546b24519bp@chr12:79850576..79850587, -
2.15e-58FFCP PHASE1:Mm9::chr4:141179191..141179200,+#_edb4888f9c8ed913da6650546b24519bp@chr4:141179191..141179200, +
2.15e-58FFCP PHASE2:Mm9::chr4:141179191..141179200,+#_edb4888f9c8ed913da6650546b24519bp@chr4:141179191..141179200, +
3.91e-58FFCP PHASE2:Mm9::chr15:84503292..84503296,+#_f12b9d533ce0eb5fed9a553374dac596p@chr15:84503292..84503296, +
3.91e-58FFCP PHASE1:Mm9::chr15:84503292..84503296,+#_f12b9d533ce0eb5fed9a553374dac596p@chr15:84503292..84503296, +
3.91e-58FFCP PHASE2:Mm9::chr12:40668168..40668171,+#_f12b9d533ce0eb5fed9a553374dac596p@chr12:40668168..40668171, +
3.91e-58FFCP PHASE1:Mm9::chr12:40668168..40668171,+#_f12b9d533ce0eb5fed9a553374dac596p@chr12:40668168..40668171, +
1.25e-52FFCP PHASE1:Mm9::chr2:33323607..33323635,+#_be8016c3232035d9f3aabad17a81de86p@chr2:33323607..33323635, +
1.25e-52FFCP PHASE2:Mm9::chr2:33323607..33323635,+#_be8016c3232035d9f3aabad17a81de86p@chr2:33323607..33323635, +
2.53e-52FFCP PHASE2:Mm9::chr8:107365938..107365944,+#_ceca857720599b3b369d1a5fa723bf48p@chr8:107365938..107365944, +
2.53e-52FFCP PHASE1:Mm9::chr8:107365938..107365944,+#_ceca857720599b3b369d1a5fa723bf48p@chr8:107365938..107365944, +
3.23e-52FFCP PHASE2:Mm9::chr3:104598813..104598825,+#_6a12224c23c55bfbedc8592b3e9ec37ap@chr3:104598813..104598825, +
3.23e-52FFCP PHASE1:Mm9::chr3:104598813..104598825,+#_6a12224c23c55bfbedc8592b3e9ec37ap@chr3:104598813..104598825, +
4.11e-52FFCP PHASE2:Mm9::chr8:125098705..125098710,+#_1514b2d12d49748824c8204584f82d6ap@chr8:125098705..125098710, +
4.11e-52FFCP PHASE1:Mm9::chr8:125098705..125098710,+#_1514b2d12d49748824c8204584f82d6ap@chr8:125098705..125098710, +
5.18e-52FFCP PHASE2:Mm9::chr5:135465906..135465912,+#_c6980022756d89bfb0e86a3ffab6bd6bp@chr5:135465906..135465912, +
5.18e-52FFCP PHASE1:Mm9::chr5:135465906..135465912,+#_c6980022756d89bfb0e86a3ffab6bd6bp@chr5:135465906..135465912, +
2.22e-51FFCP PHASE2:Mm9::chr9:84127758..84127761,+#_c558d18c08ec4e4e01a03a0d08c05917p@chr9:84127758..84127761, +
2.22e-51FFCP PHASE1:Mm9::chr9:84127758..84127761,+#_c558d18c08ec4e4e01a03a0d08c05917p@chr9:84127758..84127761, +
8.37e-49FFCP PHASE2:Mm9::chr5:64219055..64219063,-#_63e96d718ed60e01b10c1478015f7dbfp@chr5:64219055..64219063, -
8.37e-49FFCP PHASE1:Mm9::chr5:64219055..64219063,-#_63e96d718ed60e01b10c1478015f7dbfp@chr5:64219055..64219063, -
2.57e-48FFCP PHASE1:Mm9::chr15:82182200..82182204,+#_388285c72081ce975bbf3c02256cd24bp@chr15:82182200..82182204, +
2.57e-48FFCP PHASE2:Mm9::chr15:82182200..82182204,+#_388285c72081ce975bbf3c02256cd24bp@chr15:82182200..82182204, +
4.49e-48FFCP PHASE1:Mm9::chr9:46051244..46051255,+#_50a73e48d6dec4278ec1ca15858ce648p@chr9:46051244..46051255, +
4.49e-48FFCP PHASE2:Mm9::chr9:46051244..46051255,+#_50a73e48d6dec4278ec1ca15858ce648p@chr9:46051244..46051255, +
5.4e-48FFCP PHASE1:Mm9::chr1:156931282..156931291,-#_79f1d00458d91d0fc694019a2589a397p@chr1:156931282..156931291, -
5.4e-48FFCP PHASE2:Mm9::chr1:156931282..156931291,-#_79f1d00458d91d0fc694019a2589a397p@chr1:156931282..156931291, -
6.51e-48FFCP PHASE2:Mm9::chr17:57201412..57201418,-#_8a8c7b52963e9ff59c3b04c7b0130088p@chr17:57201412..57201418, -
6.51e-48FFCP PHASE1:Mm9::chr17:57201412..57201418,-#_8a8c7b52963e9ff59c3b04c7b0130088p@chr17:57201412..57201418, -
1.37e-47FFCP PHASE2:Mm9::chr17:46693370..46693378,+#_09929ae765f9d0310ad602b19a0c633dp@chr17:46693370..46693378, +
1.37e-47FFCP PHASE1:Mm9::chr17:46693370..46693378,+#_09929ae765f9d0310ad602b19a0c633dp@chr17:46693370..46693378, +
6.34e-47FFCP PHASE2:Mm9::chr4:142835790..142835793,-#_8d09444007166f100819c1041f306350p@chr4:142835790..142835793, -
6.34e-47FFCP PHASE1:Mm9::chr2:76337146..76337155,+#_8d09444007166f100819c1041f306350p5@Osbpl6
6.34e-47FFCP PHASE1:Mm9::chr14:26286217..26286232,+#_8d09444007166f100819c1041f306350p@chr14:26286217..26286232, +
6.34e-47FFCP PHASE2:Mm9::chr1:13659869..13659873,-#_8d09444007166f100819c1041f306350p@chr1:13659869..13659873, -
6.34e-47FFCP PHASE2:Mm9::chr14:26286217..26286232,+#_8d09444007166f100819c1041f306350p@chr14:26286217..26286232, +
6.34e-47FFCP PHASE1:Mm9::chr1:13659869..13659873,-#_8d09444007166f100819c1041f306350p@chr1:13659869..13659873, -
6.34e-47FFCP PHASE1:Mm9::chr2:24234641..24234644,+#_8d09444007166f100819c1041f306350p@chr2:24234641..24234644, +
6.34e-47FFCP PHASE2:Mm9::chr6:137486449..137486455,+#_8d09444007166f100819c1041f306350p@chr6:137486449..137486455, +
6.34e-47FFCP PHASE1:Mm9::chr6:137486449..137486455,+#_8d09444007166f100819c1041f306350p@chr6:137486449..137486455, +
6.34e-47FFCP PHASE2:Mm9::chr2:24234641..24234644,+#_8d09444007166f100819c1041f306350p@chr2:24234641..24234644, +
6.34e-47FFCP PHASE1:Mm9::chr4:142835790..142835793,-#_8d09444007166f100819c1041f306350p@chr4:142835790..142835793, -
6.34e-47FFCP PHASE2:Mm9::chr2:76337146..76337155,+#_8d09444007166f100819c1041f306350p5@Osbpl6
1.09e-46FFCP PHASE2:Mm9::chr5:136252496..136252506,+#_36765d1910f8ed01d30acabe59583edap@chr5:136252496..136252506, +
1.09e-46FFCP PHASE1:Mm9::chr5:136252496..136252506,+#_36765d1910f8ed01d30acabe59583edap@chr5:136252496..136252506, +
6.32e-46FFCP PHASE2:Mm9::chr19:11893526..11893532,+#_c762c5faba419b30338dd452b33d1c81p@chr19:11893526..11893532, +
6.32e-46FFCP PHASE1:Mm9::chr19:11893526..11893532,+#_c762c5faba419b30338dd452b33d1c81p@chr19:11893526..11893532, +
6.32e-46FFCP PHASE1:Mm9::chr2:31008686..31008692,-#_c762c5faba419b30338dd452b33d1c81p@chr2:31008686..31008692, -
6.32e-46FFCP PHASE2:Mm9::chr2:31008686..31008692,-#_c762c5faba419b30338dd452b33d1c81p@chr2:31008686..31008692, -
7.81e-46FFCP PHASE1:Mm9::chr10:79561288..79561291,-#_1ec1b38f00def004638e7a6be4cbf5f5p@chr10:79561288..79561291, -
7.81e-46FFCP PHASE2:Mm9::chr10:79561288..79561291,-#_1ec1b38f00def004638e7a6be4cbf5f5p@chr10:79561288..79561291, -
1.47e-45FFCP PHASE1:Mm9::chr3:35620179..35620188,+#_732158052828d519d07380a1ffdbbe52p@chr3:35620179..35620188, +
1.47e-45FFCP PHASE2:Mm9::chr3:35620179..35620188,+#_732158052828d519d07380a1ffdbbe52p@chr3:35620179..35620188, +
1.2e-44FFCP PHASE1:Mm9::chr18:66636209..66636215,-#_5bcf000756be1f3c75ffa4a6e206ed64p@chr18:66636209..66636215, -
1.2e-44FFCP PHASE2:Mm9::chr18:66636209..66636215,-#_5bcf000756be1f3c75ffa4a6e206ed64p@chr18:66636209..66636215, -
1.2e-44FFCP PHASE2:Mm9::chr15:103135874..103135880,+#_5bcf000756be1f3c75ffa4a6e206ed64p@chr15:103135874..103135880, +
1.2e-44FFCP PHASE1:Mm9::chr15:103135874..103135880,+#_5bcf000756be1f3c75ffa4a6e206ed64p@chr15:103135874..103135880, +
1.42e-44FFCP PHASE1:Mm9::chr16:78268076..78268083,-#_dbf69bc809027ec5ba3ada269402f3c7p@chr16:78268076..78268083, -
1.42e-44FFCP PHASE2:Mm9::chr16:78268076..78268083,-#_dbf69bc809027ec5ba3ada269402f3c7p@chr16:78268076..78268083, -
1.42e-44FFCP PHASE1:Mm9::chr10:80565428..80565433,+#_dbf69bc809027ec5ba3ada269402f3c7p@chr10:80565428..80565433, +
1.42e-44FFCP PHASE2:Mm9::chr10:80565428..80565433,+#_dbf69bc809027ec5ba3ada269402f3c7p@chr10:80565428..80565433, +
5.38e-44FFCP PHASE1:Mm9::chr1:132748706..132748715,+#_7ec3265dec5bfd12563b3d30970b1e78p@chr1:132748706..132748715, +
5.38e-44FFCP PHASE2:Mm9::chr1:132748706..132748715,+#_7ec3265dec5bfd12563b3d30970b1e78p@chr1:132748706..132748715, +
5.58e-44FFCP PHASE1:Mm9::chr2:143738263..143738267,+#_055b65292261221164f9e15ddb6da0a3p@chr2:143738263..143738267, +
5.58e-44FFCP PHASE2:Mm9::chr2:143738263..143738267,+#_055b65292261221164f9e15ddb6da0a3p@chr2:143738263..143738267, +
7.05e-43FFCP PHASE1:Mm9::chr3:122215917..122215967,-#_dfdcc06b1cd9c49450d7f4250a78ddaap@chr3:122215917..122215967, -
7.05e-43FFCP PHASE2:Mm9::chr3:122215917..122215967,-#_dfdcc06b1cd9c49450d7f4250a78ddaap@chr3:122215917..122215967, -
2.1e-41FFCP PHASE2:Mm9::chr12:111682896..111682907,+#_d0eff0d8d3b14107e073c1e5957f0945p@chr12:111682896..111682907, +
2.1e-41FFCP PHASE1:Mm9::chr12:111682896..111682907,+#_d0eff0d8d3b14107e073c1e5957f0945p@chr12:111682896..111682907, +
2.46e-41FFCP PHASE2:Mm9::chr16:32380022..32380027,+#_3c5cfbabf6f4242bac46dbdd860ddaccp@chr16:32380022..32380027, +
2.46e-41FFCP PHASE1:Mm9::chr16:32380022..32380027,+#_3c5cfbabf6f4242bac46dbdd860ddaccp@chr16:32380022..32380027, +
2.88e-41FFCP PHASE1:Mm9::chr7:96869911..96869915,+#_7f5e32974a42d33d6506fa24ff2a5f91p@chr7:96869911..96869915, +
2.88e-41FFCP PHASE2:Mm9::chr7:96869911..96869915,+#_7f5e32974a42d33d6506fa24ff2a5f91p@chr7:96869911..96869915, +
3.41e-41FFCP PHASE1:Mm9::chr11:120478620..120478628,+#_a22e6853ef1a7debed84b953a813ca58p@chr11:120478620..120478628, +
3.41e-41FFCP PHASE2:Mm9::chr11:120478620..120478628,+#_a22e6853ef1a7debed84b953a813ca58p@chr11:120478620..120478628, +
4.98e-41FFCP PHASE1:Mm9::chr5:66443992..66444014,-#_9b4d211489621b694f62c90747111e81p@chr5:66443992..66444014, -
4.98e-41FFCP PHASE2:Mm9::chr5:66443992..66444014,-#_9b4d211489621b694f62c90747111e81p@chr5:66443992..66444014, -
5.43e-41FFCP PHASE2:Mm9::chr7:4101973..4101978,-#_5d734b6aec0a12edda3a4a51dc528c41p4@Leng9
5.43e-41FFCP PHASE1:Mm9::chr7:4101973..4101978,-#_5d734b6aec0a12edda3a4a51dc528c41p4@Leng9
6.02e-41FFCP PHASE1:Mm9::chr9:95715941..95715947,+#_02b05c586c7f2f56f4f20636de49d11ap@chr9:95715941..95715947, +
6.02e-41FFCP PHASE2:Mm9::chr9:95715941..95715947,+#_02b05c586c7f2f56f4f20636de49d11ap@chr9:95715941..95715947, +
7.27e-41FFCP PHASE1:Mm9::chr2:75543070..75543079,-#_21755c2e759b48d4a45f206c3fe6f562p7@Nfe2l2
7.27e-41FFCP PHASE2:Mm9::chr2:75543070..75543079,-#_21755c2e759b48d4a45f206c3fe6f562p7@Nfe2l2
1.28e-40FFCP PHASE2:Mm9::chr5:29704314..29704350,+#_b0f61e8fb3575cc37a9000b5d2d3619fp@chr5:29704314..29704350, +
1.28e-40FFCP PHASE1:Mm9::chr5:29704314..29704350,+#_b0f61e8fb3575cc37a9000b5d2d3619fp@chr5:29704314..29704350, +
1.54e-40FFCP PHASE2:Mm9::chr2:38781010..38781017,+#_40bfc04845afb008b4e462475117bb76p@chr2:38781010..38781017, +
1.54e-40FFCP PHASE1:Mm9::chr2:38781010..38781017,+#_40bfc04845afb008b4e462475117bb76p@chr2:38781010..38781017, +
1.63e-40FFCP PHASE1:Mm9::chr17:71337821..71337827,+#_7e99681488fa0a0b8c6e6593f82fb1cbp@chr17:71337821..71337827, +
1.63e-40FFCP PHASE2:Mm9::chr17:71337821..71337827,+#_7e99681488fa0a0b8c6e6593f82fb1cbp@chr17:71337821..71337827, +
2.24e-40FFCP PHASE1:Mm9::chr1:127346940..127346945,-#_21e70f6de66a7dd3ea64233cc1cecad6p@chr1:127346940..127346945, -
2.24e-40FFCP PHASE2:Mm9::chr1:127346940..127346945,-#_21e70f6de66a7dd3ea64233cc1cecad6p@chr1:127346940..127346945, -
3.57e-40FFCP PHASE2:Mm9::chr5:91570078..91570084,+#_74058183ce90bea5f8ecfb0f35243e14p@chr5:91570078..91570084, +
3.57e-40FFCP PHASE1:Mm9::chr5:91570078..91570084,+#_74058183ce90bea5f8ecfb0f35243e14p@chr5:91570078..91570084, +
5.71e-40FFCP PHASE2:Mm9::chr7:4101821..4101832,-#_debdd796f6388d7b3f6fe1f538161eb1p5@Leng9
5.71e-40FFCP PHASE1:Mm9::chr7:4101821..4101832,-#_debdd796f6388d7b3f6fe1f538161eb1p5@Leng9