CL:0000784
From FANTOM5_SSTAR
Name: | plasmacytoid dendritic cell | ||
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Namespace: | FANTOM | ||
Definition: | "A dendritic cell type of distinct morphology, localization, and surface marker expression (CD123-positive) from other dendritic cell types and associated with early stage immune responses, particularly the release of physiologically abundant amounts of type I interferons in response to infection." [GOC:add, GOC:dsd, PMCID:PMC2118448, PMCID:PMC538703, PMID:15549123, PMID:17332250, PMID:17850486, PMID:20304825] | ||
Xrefs: |
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Synonyms: |
"DC2" EXACT [] "interferon-producing cell" EXACT [] "IPC" EXACT [] "lymphoid dendritic cell" EXACT [] "pDC" EXACT [] "plasmacytoid monocyte" EXACT [] "plasmacytoid T cell" EXACT [] "T-associated plasma cell" EXACT [] "type 2 DC" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000451(dendritic cell) |
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develops_from: | CL:0000037(hematopoietic stem cell) |
Children
derives from: | FF:0000045 (human plasmacytoid dendritic cell sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11228-116C4 (Dendritic Cells - plasmacytoid, donor1)
- 11309-117C4 (Dendritic Cells - plasmacytoid, donor2)
- 11385-118B8 (Dendritic Cells - plasmacytoid, donor3)
Mouse (Mus musculus)
- 11228-116C4 (Dendritic Cells - plasmacytoid, donor1)
- 11309-117C4 (Dendritic Cells - plasmacytoid, donor2)
- 11385-118B8 (Dendritic Cells - plasmacytoid, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000784 (plasmacytoid dendritic cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
2.79e-195 | FFCP PHASE2:Hg19::chr2:220466151..220466157,+#_9025b5fd6d22363ef6114b7a2102de6e | p11@STK11IP |
2.79e-195 | FFCP PHASE2:Hg19::chr2:153415904..153415907,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:153415904..153415907, + |
2.79e-195 | FFCP PHASE2:Hg19::chr9:94935773..94935787,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr9:94935773..94935787, - |
2.79e-195 | FFCP PHASE2:Hg19::chr13:60902553..60902562,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr13:60902553..60902562, + |
2.79e-195 | FFCP PHASE1:Hg19::chr18:42134920..42134924,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr18:42134920..42134924, - |
2.79e-195 | FFCP PHASE2:Hg19::chr10:72253384..72253425,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr10:72253384..72253425, + |
2.79e-195 | FFCP PHASE2:Hg19::chr21:43723219..43723257,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr21:43723219..43723257, - |
2.79e-195 | FFCP PHASE1:Hg19::chr16:56904102..56904111,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr16:56904102..56904111, + |
2.79e-195 | FFCP PHASE2:Hg19::chr3:46077062..46077087,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr3:46077062..46077087, + |
2.79e-195 | FFCP PHASE2:Hg19::chr6:35026759..35026770,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr6:35026759..35026770, - |
2.79e-195 | FFCP PHASE2:Hg19::chr20:23029956..23029963,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr20:23029956..23029963, + |
2.79e-195 | FFCP PHASE1:Hg19::chr21:45602458..45602471,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr21:45602458..45602471, + |
2.79e-195 | FFCP PHASE2:Hg19::chr1:53834681..53834688,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr1:53834681..53834688, - |
2.79e-195 | FFCP PHASE1:Hg19::chrX:22056423..22056428,+#_9025b5fd6d22363ef6114b7a2102de6e | p13@PHEX |
2.79e-195 | FFCP PHASE2:Hg19::chr17:55950784..55950789,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr17:55950784..55950789, - |
2.79e-195 | FFCP PHASE1:Hg19::chr2:99181476..99181492,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:99181476..99181492, + |
2.79e-195 | FFCP PHASE2:Hg19::chr18:42134920..42134924,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr18:42134920..42134924, - |
2.79e-195 | FFCP PHASE1:Hg19::chr19:56623811..56623815,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr19:56623811..56623815, - |
2.79e-195 | FFCP PHASE1:Hg19::chr12:111537227..111537239,+#_9025b5fd6d22363ef6114b7a2102de6e | p7@CUX2 |
2.79e-195 | FFCP PHASE1:Hg19::chr12:77160173..77160180,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr12:77160173..77160180, + |
2.79e-195 | FFCP PHASE2:Hg19::chr12:132541629..132541634,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr12:132541629..132541634, - |
2.79e-195 | FFCP PHASE1:Hg19::chr6:47445214..47445218,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr6:47445214..47445218, - |
2.79e-195 | FFCP PHASE1:Hg19::chr20:42340062..42340071,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr20:42340062..42340071, + |
2.79e-195 | FFCP PHASE2:Hg19::chr19:5336483..5336493,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr19:5336483..5336493, + |
2.79e-195 | FFCP PHASE1:Hg19::chr12:132541629..132541634,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr12:132541629..132541634, - |
2.79e-195 | FFCP PHASE2:Hg19::chrX:22056377..22056388,+#_9025b5fd6d22363ef6114b7a2102de6e | p4@PHEX |
2.79e-195 | FFCP PHASE2:Hg19::chr1:66169696..66169704,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr1:66169696..66169704, + |
2.79e-195 | FFCP PHASE2:Hg19::chr17:16892517..16892527,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr17:16892517..16892527, - |
2.79e-195 | FFCP PHASE2:Hg19::chr6:342279..342288,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr6:342279..342288, + |
2.79e-195 | FFCP PHASE1:Hg19::chr3:50365569..50365570,-#_9025b5fd6d22363ef6114b7a2102de6e | p3@TUSC2 |
2.79e-195 | FFCP PHASE1:Hg19::chr2:60639343..60639352,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:60639343..60639352, - |
2.79e-195 | FFCP PHASE1:Hg19::chr19:5338459..5338468,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr19:5338459..5338468, - |
2.79e-195 | FFCP PHASE2:Hg19::chr17:27065136..27065144,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr17:27065136..27065144, + |
2.79e-195 | FFCP PHASE2:Hg19::chr8:135614204..135614209,-#_9025b5fd6d22363ef6114b7a2102de6e | p22@ZFAT |
2.79e-195 | FFCP PHASE1:Hg19::chr15:72209237..72209246,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr15:72209237..72209246, - |
2.79e-195 | FFCP PHASE2:Hg19::chr7:4784283..4784288,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr7:4784283..4784288, - |
2.79e-195 | FFCP PHASE1:Hg19::chr20:23029606..23029614,-#_9025b5fd6d22363ef6114b7a2102de6e | p17@THBD |
2.79e-195 | FFCP PHASE1:Hg19::chr4:8200756..8200765,+#_9025b5fd6d22363ef6114b7a2102de6e | p17@SH3TC1 |
2.79e-195 | FFCP PHASE2:Hg19::chr1:53834714..53834761,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr1:53834714..53834761, - |
2.79e-195 | FFCP PHASE1:Hg19::chr11:629346..629350,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr11:629346..629350, - |
2.79e-195 | FFCP PHASE1:Hg19::chrX:22056435..22056446,+#_9025b5fd6d22363ef6114b7a2102de6e | p3@PHEX |
2.79e-195 | FFCP PHASE1:Hg19::chr2:153415904..153415907,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:153415904..153415907, + |
2.79e-195 | FFCP PHASE1:Hg19::chr3:46077062..46077087,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr3:46077062..46077087, + |
2.79e-195 | FFCP PHASE2:Hg19::chr15:75304015..75304027,+#_9025b5fd6d22363ef6114b7a2102de6e | p14@SCAMP5 |
2.79e-195 | FFCP PHASE1:Hg19::chr10:103662491..103662497,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr10:103662491..103662497, + |
2.79e-195 | FFCP PHASE2:Hg19::chr5:1799180..1799192,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr5:1799180..1799192, + |
2.79e-195 | FFCP PHASE1:Hg19::chr21:43723219..43723257,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr21:43723219..43723257, - |
2.79e-195 | FFCP PHASE2:Hg19::chr20:23211928..23211934,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr20:23211928..23211934, + |
2.79e-195 | FFCP PHASE1:Hg19::chr6:35026759..35026770,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr6:35026759..35026770, - |
2.79e-195 | FFCP PHASE1:Hg19::chr20:23029956..23029963,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr20:23029956..23029963, + |
2.79e-195 | FFCP PHASE2:Hg19::chrX:22056423..22056428,+#_9025b5fd6d22363ef6114b7a2102de6e | p13@PHEX |
2.79e-195 | FFCP PHASE1:Hg19::chr10:72253384..72253425,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr10:72253384..72253425, + |
2.79e-195 | FFCP PHASE2:Hg19::chr17:40134422..40134444,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr17:40134422..40134444, - |
2.79e-195 | FFCP PHASE1:Hg19::chr1:53834681..53834688,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr1:53834681..53834688, - |
2.79e-195 | FFCP PHASE2:Hg19::chr11:628252..628271,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr11:628252..628271, - |
2.79e-195 | FFCP PHASE1:Hg19::chr18:42136420..42136431,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr18:42136420..42136431, - |
2.79e-195 | FFCP PHASE2:Hg19::chr5:43519263..43519271,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr5:43519263..43519271, + |
2.79e-195 | FFCP PHASE1:Hg19::chr2:99158646..99158653,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:99158646..99158653, + |
2.79e-195 | FFCP PHASE1:Hg19::chr13:60902553..60902562,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr13:60902553..60902562, + |
2.79e-195 | FFCP PHASE2:Hg19::chr12:7902131..7902142,-#_9025b5fd6d22363ef6114b7a2102de6e | p4@CLEC4C |
2.79e-195 | FFCP PHASE1:Hg19::chr9:94935693..94935702,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr9:94935693..94935702, - |
2.79e-195 | FFCP PHASE2:Hg19::chr16:56903804..56903818,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr16:56903804..56903818, + |
2.79e-195 | FFCP PHASE1:Hg19::chr2:220466151..220466157,+#_9025b5fd6d22363ef6114b7a2102de6e | p11@STK11IP |
2.79e-195 | FFCP PHASE2:Hg19::chr21:45602441..45602448,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr21:45602441..45602448, + |
2.79e-195 | FFCP PHASE1:Hg19::chr19:5336483..5336493,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr19:5336483..5336493, + |
2.79e-195 | FFCP PHASE1:Hg19::chr1:66169696..66169704,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr1:66169696..66169704, + |
2.79e-195 | FFCP PHASE1:Hg19::chr6:342279..342288,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr6:342279..342288, + |
2.79e-195 | FFCP PHASE2:Hg19::chr18:42136420..42136431,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr18:42136420..42136431, - |
2.79e-195 | FFCP PHASE2:Hg19::chr16:2737269..2737281,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr16:2737269..2737281, - |
2.79e-195 | FFCP PHASE1:Hg19::chr8:135614204..135614209,-#_9025b5fd6d22363ef6114b7a2102de6e | p22@ZFAT |
2.79e-195 | FFCP PHASE2:Hg19::chr15:75304053..75304061,+#_9025b5fd6d22363ef6114b7a2102de6e | p26@SCAMP5 |
2.79e-195 | FFCP PHASE2:Hg19::chr7:101821643..101821681,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr7:101821643..101821681, + |
2.79e-195 | FFCP PHASE2:Hg19::chrX:22056435..22056446,+#_9025b5fd6d22363ef6114b7a2102de6e | p3@PHEX |
2.79e-195 | FFCP PHASE2:Hg19::chr2:99181476..99181492,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:99181476..99181492, + |
2.79e-195 | FFCP PHASE2:Hg19::chr6:47445214..47445218,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr6:47445214..47445218, - |
2.79e-195 | FFCP PHASE1:Hg19::chr7:4784283..4784288,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr7:4784283..4784288, - |
2.79e-195 | FFCP PHASE1:Hg19::chr17:55950784..55950789,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr17:55950784..55950789, - |
2.79e-195 | FFCP PHASE1:Hg19::chr1:53834714..53834761,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr1:53834714..53834761, - |
2.79e-195 | FFCP PHASE1:Hg19::chr15:75304015..75304027,+#_9025b5fd6d22363ef6114b7a2102de6e | p14@SCAMP5 |
2.79e-195 | FFCP PHASE1:Hg19::chrX:22056350..22056355,+#_9025b5fd6d22363ef6114b7a2102de6e | p11@PHEX |
2.79e-195 | FFCP PHASE1:Hg19::chr20:23211928..23211934,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr20:23211928..23211934, + |
2.79e-195 | FFCP PHASE1:Hg19::chr9:94935773..94935787,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr9:94935773..94935787, - |
2.79e-195 | FFCP PHASE1:Hg19::chr17:16892517..16892527,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr17:16892517..16892527, - |
2.79e-195 | FFCP PHASE2:Hg19::chr16:56904102..56904111,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr16:56904102..56904111, + |
2.79e-195 | FFCP PHASE1:Hg19::chr5:1799180..1799192,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr5:1799180..1799192, + |
2.79e-195 | FFCP PHASE2:Hg19::chr21:45602458..45602471,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr21:45602458..45602471, + |
2.79e-195 | FFCP PHASE2:Hg19::chr19:56623811..56623815,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr19:56623811..56623815, - |
2.79e-195 | FFCP PHASE1:Hg19::chr17:27065136..27065144,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr17:27065136..27065144, + |
2.79e-195 | FFCP PHASE2:Hg19::chr9:94935693..94935702,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr9:94935693..94935702, - |
2.79e-195 | FFCP PHASE2:Hg19::chr15:72209237..72209246,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr15:72209237..72209246, - |
2.79e-195 | FFCP PHASE1:Hg19::chr12:7902131..7902142,-#_9025b5fd6d22363ef6114b7a2102de6e | p4@CLEC4C |
2.79e-195 | FFCP PHASE2:Hg19::chr20:42340062..42340071,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr20:42340062..42340071, + |
2.79e-195 | FFCP PHASE1:Hg19::chr16:56903804..56903818,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr16:56903804..56903818, + |
2.79e-195 | FFCP PHASE2:Hg19::chr12:111537227..111537239,+#_9025b5fd6d22363ef6114b7a2102de6e | p7@CUX2 |
2.79e-195 | FFCP PHASE1:Hg19::chr5:43519263..43519271,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr5:43519263..43519271, + |
2.79e-195 | FFCP PHASE2:Hg19::chr12:77160173..77160180,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr12:77160173..77160180, + |
2.79e-195 | FFCP PHASE2:Hg19::chr10:103662491..103662497,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr10:103662491..103662497, + |
2.79e-195 | FFCP PHASE2:Hg19::chr3:50365569..50365570,-#_9025b5fd6d22363ef6114b7a2102de6e | p3@TUSC2 |
2.79e-195 | FFCP PHASE2:Hg19::chr2:60639343..60639352,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:60639343..60639352, - |
2.79e-195 | FFCP PHASE2:Hg19::chr19:5338459..5338468,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr19:5338459..5338468, - |