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|located_in=
|located_in=
|name=hematopoietic lineage restricted progenitor cell
|name=hematopoietic lineage restricted progenitor cell
|namespace=cell;;efo
|namespace=FANTOM
|obo_creation_date=2010-01-06T03:43:20Z
|obo_creation_date=2010-01-06T03:43:20Z
|part_of=
|part_of=

Latest revision as of 16:39, 12 September 2014

Name:hematopoietic lineage restricted progenitor cell
Namespace:FANTOM
Definition:"A hematopoietic progenitor cell that is capable of developing into only one lineage of hematopoietic cells." [GOC:tfm, PMID:19022770]
Created by:tmeehan
Creation date:2010-01-06T03:43:20Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0008001(hematopoietic precursor cell)
disjoint_from:CL:0002032(hematopoietic oligopotent progenitor cell)
develops_from:CL:0002032(hematopoietic oligopotent progenitor cell)



Children


is a:CL:0000838 (lymphoid lineage restricted progenitor cell),CL:0000839 (myeloid lineage restricted progenitor cell),CL:0001019 (CD115-positive monocyte OR common dendritic progenitor)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002031 (hematopoietic lineage restricted progenitor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
9.76e-94FFCP PHASE2:Hg19::chr14:100531693..100531705,+#_953d2da5c3101ed3d82acafe19a68e9bp6@EVL
9.76e-94FFCP PHASE1:Hg19::chr14:100531693..100531705,+#_953d2da5c3101ed3d82acafe19a68e9bp6@EVL
3.25e-93FFCP PHASE1:Hg19::chr19:49842010..49842054,+#_263acbda59886cae01ecc4a0ffc35e09p@chr19:49842010..49842054, +
3.25e-93FFCP PHASE2:Hg19::chr19:49842010..49842054,+#_263acbda59886cae01ecc4a0ffc35e09p@chr19:49842010..49842054, +
1.33e-91FFCP PHASE2:Hg19::chr2:24149046..24149063,+#_bc8d021902410ae6d3b1d45d509a311dp@chr2:24149046..24149063, +
1.33e-91FFCP PHASE1:Hg19::chr2:24149046..24149063,+#_bc8d021902410ae6d3b1d45d509a311dp@chr2:24149046..24149063, +
4.42e-91FFCP PHASE2:Hg19::chr2:68592394..68592405,+#_b3d7880dfb5741e64edb3dab9d9c28acp2@PLEK
4.42e-91FFCP PHASE1:Hg19::chr2:68592394..68592405,+#_b3d7880dfb5741e64edb3dab9d9c28acp2@PLEK
1.05e-90FFCP PHASE1:Hg19::chr1:31206575..31206590,-#_dcf57044ff8a1b9ec00437abd04f3588p@chr1:31206575..31206590, -
1.05e-90FFCP PHASE2:Hg19::chr1:31206575..31206590,-#_dcf57044ff8a1b9ec00437abd04f3588p@chr1:31206575..31206590, -
2.09e-90FFCP PHASE1:Hg19::chr1:209941862..209941887,+#_a75fe7bda828e929ccb2a8972cf0086fp6@TRAF3IP3
2.09e-90FFCP PHASE2:Hg19::chr1:209941862..209941887,+#_a75fe7bda828e929ccb2a8972cf0086fp6@TRAF3IP3
3.89e-90FFCP PHASE2:Hg19::chr1:160681573..160681587,-#_c2b2dfe9095c4608d95f0b28f76126cdp2@CD48
3.89e-90FFCP PHASE1:Hg19::chr1:160681573..160681587,-#_c2b2dfe9095c4608d95f0b28f76126cdp2@CD48
2.64e-88FFCP PHASE2:Hg19::chr1:206730535..206730549,+#_f1b598e09440d6e72e581e8338979b6cp4@RASSF5
2.64e-88FFCP PHASE1:Hg19::chr1:206730535..206730549,+#_f1b598e09440d6e72e581e8338979b6cp4@RASSF5
6.55e-88FFCP PHASE2:Hg19::chr19:16695359..16695379,+#_318efe269388c55d10daff49f92e5312p@chr19:16695359..16695379, +
6.55e-88FFCP PHASE1:Hg19::chr19:16695359..16695379,+#_318efe269388c55d10daff49f92e5312p@chr19:16695359..16695379, +
2.97e-87FFCP PHASE2:Hg19::chr19:2085302..2085320,-#_90ba1c6e4dcc996ccc8bed98611aa9dbp3@MOB3A
2.97e-87FFCP PHASE1:Hg19::chr19:2085302..2085320,-#_90ba1c6e4dcc996ccc8bed98611aa9dbp3@MOB3A
9.58e-87FFCP PHASE1:Hg19::chr19:49842573..49842602,+#_f0db99c232462a5dfd88d5289a3f3a64p@chr19:49842573..49842602, +
9.58e-87FFCP PHASE2:Hg19::chr19:49842573..49842602,+#_f0db99c232462a5dfd88d5289a3f3a64p@chr19:49842573..49842602, +
1.81e-86FFCP PHASE1:Hg19::chr1:9711821..9711832,+#_16d57f5497fbd2b8127e0be9aa2660cap2@PIK3CD
1.81e-86FFCP PHASE2:Hg19::chr1:9711821..9711832,+#_16d57f5497fbd2b8127e0be9aa2660cap2@PIK3CD
5.9e-86FFCP PHASE1:Hg19::chr19:49843537..49843640,+#_6c87d65c05825f3403fa98169e164e39p@chr19:49843537..49843640, +
5.9e-86FFCP PHASE2:Hg19::chr19:49843537..49843640,+#_6c87d65c05825f3403fa98169e164e39p@chr19:49843537..49843640, +
8.2e-86FFCP PHASE1:Hg19::chr21:46340884..46340893,-#_27ea45b9e43b4c5389e9a05835d47cdcp3@ITGB2
8.2e-86FFCP PHASE2:Hg19::chr21:46340884..46340893,-#_27ea45b9e43b4c5389e9a05835d47cdcp3@ITGB2
9.6e-86FFCP PHASE2:Hg19::chr1:203256483..203256503,-#_996e4f05615d00c7c4734212f65aaea6p@chr1:203256483..203256503, -
9.6e-86FFCP PHASE1:Hg19::chr1:203256483..203256503,-#_996e4f05615d00c7c4734212f65aaea6p@chr1:203256483..203256503, -
1.68e-85FFCP PHASE2:Hg19::chr14:100531713..100531724,+#_67ae686dc7922c85d20c451791bd9b24p11@EVL
1.68e-85FFCP PHASE1:Hg19::chr14:100531713..100531724,+#_67ae686dc7922c85d20c451791bd9b24p11@EVL
1.78e-85FFCP PHASE2:Hg19::chr15:45018966..45018983,-#_cfe8a823bc8039ec7ffaab82d6782e40p@chr15:45018966..45018983, -
1.78e-85FFCP PHASE1:Hg19::chr15:45018966..45018983,-#_cfe8a823bc8039ec7ffaab82d6782e40p@chr15:45018966..45018983, -
2.44e-85FFCP PHASE2:Hg19::chr1:31229452..31229490,-#_9cfaacf33f4e1db930d54e38a3a4e6d7p@chr1:31229452..31229490, -
2.44e-85FFCP PHASE1:Hg19::chr1:31229452..31229490,-#_9cfaacf33f4e1db930d54e38a3a4e6d7p@chr1:31229452..31229490, -
2.58e-85FFCP PHASE1:Hg19::chr16:50776625..50776663,-#_72d305e4fc5a75b465ebb3945f956013p@chr16:50776625..50776663, -
2.58e-85FFCP PHASE2:Hg19::chr16:50776625..50776663,-#_72d305e4fc5a75b465ebb3945f956013p@chr16:50776625..50776663, -
3.84e-85FFCP PHASE2:Hg19::chr1:203256822..203256845,+#_0254c14268d9768237034b97f3903b36p1@ENST00000433008
3.84e-85FFCP PHASE1:Hg19::chr1:203256822..203256845,+#_0254c14268d9768237034b97f3903b36p1@ENST00000433008
5.48e-85FFCP PHASE1:Hg19::chr10:114134954..114135003,+#_c09cd26c15fb405e52ff5b232d11954ep5@ACSL5
5.48e-85FFCP PHASE2:Hg19::chr10:114134954..114135003,+#_c09cd26c15fb405e52ff5b232d11954ep5@ACSL5
5.89e-85FFCP PHASE1:Hg19::chr2:163175430..163175460,-#_7136ca1e5279ef6c3add66f8984327f0p2@IFIH1
5.89e-85FFCP PHASE2:Hg19::chr2:163175430..163175460,-#_7136ca1e5279ef6c3add66f8984327f0p2@IFIH1
1.08e-83FFCP PHASE1:Hg19::chr19:49838937..49838974,+#_9cc48faaf48811f317e94a2ea2628a58p@chr19:49838937..49838974, +
1.08e-83FFCP PHASE2:Hg19::chr19:49838937..49838974,+#_9cc48faaf48811f317e94a2ea2628a58p@chr19:49838937..49838974, +
2.35e-83FFCP PHASE2:Hg19::chr9:74920462..74920487,+#_bb5a1c080b2f64be6ded7404635f46c8p1@ENST00000451152
2.35e-83FFCP PHASE1:Hg19::chr9:74920462..74920487,+#_bb5a1c080b2f64be6ded7404635f46c8p1@ENST00000451152
3.44e-83FFCP PHASE1:Hg19::chr1:31210518..31210532,-#_3a5e99f68e824d631eb20d5602b18988p@chr1:31210518..31210532, -
3.44e-83FFCP PHASE2:Hg19::chr1:31210518..31210532,-#_3a5e99f68e824d631eb20d5602b18988p@chr1:31210518..31210532, -
3.46e-83FFCP PHASE2:Hg19::chr9:134543820..134543862,-#_b7b7d74a6615937956299de2884cef05p@chr9:134543820..134543862, -
3.46e-83FFCP PHASE1:Hg19::chr9:134543820..134543862,-#_b7b7d74a6615937956299de2884cef05p@chr9:134543820..134543862, -
6.05e-83FFCP PHASE1:Hg19::chr17:29632219..29632300,-#_944f5571eb3af553c6781c8ba0621849p6@EVI2B
6.05e-83FFCP PHASE2:Hg19::chr17:29632219..29632300,-#_944f5571eb3af553c6781c8ba0621849p6@EVI2B
1.29e-82FFCP PHASE1:Hg19::chr13:41593392..41593403,-#_086acbb0aa18e1f3cb05f2315b74876ep7@ELF1
1.29e-82FFCP PHASE2:Hg19::chr13:41593392..41593403,-#_086acbb0aa18e1f3cb05f2315b74876ep7@ELF1
2.44e-82FFCP PHASE1:Hg19::chr22:18260077..18260127,+#_408457da1ad00e203ea1f121ec649fc4p1@LINC00528
2.44e-82FFCP PHASE2:Hg19::chr22:18260077..18260127,+#_408457da1ad00e203ea1f121ec649fc4p1@LINC00528
3.1e-82FFCP PHASE2:Hg19::chr6:32411527..32411547,+#_ad62bfd04710dd39f6ca8837ca770d5dp4@HLA-DRA
3.1e-82FFCP PHASE1:Hg19::chr6:32411527..32411547,+#_ad62bfd04710dd39f6ca8837ca770d5dp4@HLA-DRA
5.54e-82FFCP PHASE1:Hg19::chr17:6917862..6917879,-#_e78d3b82a383e66e0f654f720e7df5c0p1@AF161372
5.54e-82FFCP PHASE2:Hg19::chr17:6917862..6917879,-#_e78d3b82a383e66e0f654f720e7df5c0p1@AF161372
5.62e-82FFCP PHASE2:Hg19::chr1:27952741..27952753,-#_93a2fc66b9501d03498c4da30ad6f31dp8@FGR
5.62e-82FFCP PHASE1:Hg19::chr1:27952741..27952753,-#_93a2fc66b9501d03498c4da30ad6f31dp8@FGR
6.93e-82FFCP PHASE2:Hg19::chr2:158300487..158300500,-#_fa2aee07fb5a3d71802c50694c1ff89bp3@CYTIP
6.93e-82FFCP PHASE1:Hg19::chr2:158300487..158300500,-#_fa2aee07fb5a3d71802c50694c1ff89bp3@CYTIP
7.21e-82FFCP PHASE2:Hg19::chr17:29641017..29641032,-#_b077e4fee7931e37648faa1f3a8631e2p4@EVI2B
7.21e-82FFCP PHASE1:Hg19::chr17:29641017..29641032,-#_b077e4fee7931e37648faa1f3a8631e2p4@EVI2B
9.06e-82FFCP PHASE2:Hg19::chr1:27952755..27952769,-#_a7bb8cc137b32821c8619acd916e9fe0p9@FGR
9.06e-82FFCP PHASE1:Hg19::chr1:27952755..27952769,-#_a7bb8cc137b32821c8619acd916e9fe0p9@FGR
1.41e-81FFCP PHASE2:Hg19::chr12:7060440..7060453,+#_bd614bd554299fdf22fb59dd17bbc1a4p5@PTPN6
1.41e-81FFCP PHASE1:Hg19::chr12:7060440..7060453,+#_bd614bd554299fdf22fb59dd17bbc1a4p5@PTPN6
1.51e-81FFCP PHASE1:Hg19::chr6:32577619..32577667,-#_5335638a0a0f0b8c057907e839c76f38p@chr6:32577619..32577667, -
1.51e-81FFCP PHASE2:Hg19::chr6:32577619..32577667,-#_5335638a0a0f0b8c057907e839c76f38p@chr6:32577619..32577667, -
1.55e-81FFCP PHASE1:Hg19::chr17:29632384..29632430,-#_f17a4f3ec418f39aca8d3868f5a923bdp7@EVI2B
1.55e-81FFCP PHASE2:Hg19::chr17:29632384..29632430,-#_f17a4f3ec418f39aca8d3868f5a923bdp7@EVI2B
2.18e-81FFCP PHASE2:Hg19::chr19:18197799..18197815,-#_ee7af376198b41e1b85473879b0a706fp2@IL12RB1
2.18e-81FFCP PHASE1:Hg19::chr19:18197799..18197815,-#_ee7af376198b41e1b85473879b0a706fp2@IL12RB1
2.98e-81FFCP PHASE1:Hg19::chrX:48547205..48547222,+#_2c483755e63c06a87d1f9a25081a6bb6p2@WAS
2.98e-81FFCP PHASE2:Hg19::chrX:48547205..48547222,+#_2c483755e63c06a87d1f9a25081a6bb6p2@WAS
3.03e-81FFCP PHASE2:Hg19::chr6:33036875..33036943,-#_5c74d5abe7112d8941492aa6e251fc50p@chr6:33036875..33036943, -
3.03e-81FFCP PHASE1:Hg19::chr6:33036875..33036943,-#_5c74d5abe7112d8941492aa6e251fc50p@chr6:33036875..33036943, -
3.25e-81FFCP PHASE2:Hg19::chr6:32411178..32411194,+#_79d9af5ecf949bd91b6029e3a0746518p6@HLA-DQA1
3.25e-81FFCP PHASE1:Hg19::chr6:32411178..32411194,+#_79d9af5ecf949bd91b6029e3a0746518p6@HLA-DQA1
3.59e-81FFCP PHASE2:Hg19::chr4:82426567..82426615,+#_44e15cef3329ad064619c30e4a7b5f29p@chr4:82426567..82426615, +
3.59e-81FFCP PHASE1:Hg19::chr4:82426567..82426615,+#_44e15cef3329ad064619c30e4a7b5f29p@chr4:82426567..82426615, +
5.85e-81FFCP PHASE2:Hg19::chr7:6066194..6066222,-#_1cc65bec19de2f519e2b1d35513bce21p3@EIF2AK1
5.85e-81FFCP PHASE1:Hg19::chr7:6066194..6066222,-#_1cc65bec19de2f519e2b1d35513bce21p3@EIF2AK1
7.36e-81FFCP PHASE2:Hg19::chr13:41593405..41593416,-#_6ef29b505ff10063b12283f4b5b7cda1p9@ELF1
7.36e-81FFCP PHASE1:Hg19::chr13:41593405..41593416,-#_6ef29b505ff10063b12283f4b5b7cda1p9@ELF1
1.05e-80FFCP PHASE2:Hg19::chr7:128503395..128503414,+#_68dcd1ab6e18abec1b0f935681d4eaecp@chr7:128503395..128503414, +
1.05e-80FFCP PHASE1:Hg19::chr7:128503395..128503414,+#_68dcd1ab6e18abec1b0f935681d4eaecp@chr7:128503395..128503414, +
1.55e-80FFCP PHASE2:Hg19::chr1:203258874..203258891,+#_960048b05288fbbe6c24a8d58094a4f4p@chr1:203258874..203258891, +
1.55e-80FFCP PHASE1:Hg19::chr1:203258874..203258891,+#_960048b05288fbbe6c24a8d58094a4f4p@chr1:203258874..203258891, +
2.64e-80FFCP PHASE2:Hg19::chr9:107537765..107537779,-#_a44f944d99f86e39ac2d318117925fffp@chr9:107537765..107537779, -
2.64e-80FFCP PHASE1:Hg19::chr9:107537765..107537779,-#_a44f944d99f86e39ac2d318117925fffp@chr9:107537765..107537779, -
3.27e-80FFCP PHASE2:Hg19::chr12:57871853..57871879,-#_07df3b3d863835dde8a2d4cbd59e7084p6@ARHGAP9
3.27e-80FFCP PHASE1:Hg19::chr12:57871853..57871879,-#_07df3b3d863835dde8a2d4cbd59e7084p6@ARHGAP9
4.29e-80FFCP PHASE2:Hg19::chr2:128458939..128458961,-#_bbc652619f9e5cb9f6574df62b6708f8p@chr2:128458939..128458961, -
4.29e-80FFCP PHASE1:Hg19::chr2:128458939..128458961,-#_bbc652619f9e5cb9f6574df62b6708f8p@chr2:128458939..128458961, -