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CL:0002252

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Name:epithelial cell of esophagus
Namespace:FANTOM
Definition:"An epithelial cell of the esophagus." [GOC:tfm]
Xrefs:
links:
FMA:63071
Alt_id: CL:1000402
Created by:tmeehan
Creation date:2010-09-08T09:28:20Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0002251(epithelial cell of alimentary canal)
part_of:UBERON:0001043(esophagus)



Children


is a:FF:0102428 (esophageal squamous cell carcinoma cell line)
derives from:FF:0000056 (human epithelial cell of esophagus sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002252 (epithelial cell of esophagus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
4.66e-66FFCP PHASE2:Hg19::chr6:47253676..47253680,-#_6ab85d284b629f219308a4aca6976452p22@TNFRSF21
4.66e-66FFCP PHASE1:Hg19::chr6:47253676..47253680,-#_6ab85d284b629f219308a4aca6976452p22@TNFRSF21
9.91e-41FFCP PHASE1:Hg19::chr10:105495838..105495848,-#_596c47749c57003882098ef627b76ff9p@chr10:105495838..105495848, -
9.91e-41FFCP PHASE2:Hg19::chr10:105495838..105495848,-#_596c47749c57003882098ef627b76ff9p@chr10:105495838..105495848, -
3.3e-40FFCP PHASE1:Hg19::chr17:39767356..39767365,+#_2b4b865a656f2c1d4e1e18af0c7745b6p@chr17:39767356..39767365, +
3.3e-40FFCP PHASE2:Hg19::chr17:39767356..39767365,+#_2b4b865a656f2c1d4e1e18af0c7745b6p@chr17:39767356..39767365, +
5.05e-34FFCP PHASE1:Hg19::chrX:102977640..102977644,-#_f9d3a811a2de138f36af1250080999e4p@chrX:102977640..102977644, -
5.05e-34FFCP PHASE2:Hg19::chrX:102977640..102977644,-#_f9d3a811a2de138f36af1250080999e4p@chrX:102977640..102977644, -
7.06e-34FFCP PHASE2:Hg19::chr20:43726572..43726588,+#_e0f8743d21fa0c91cd3f3d6cb4c9489ep@chr20:43726572..43726588, +
7.06e-34FFCP PHASE1:Hg19::chr20:43726572..43726588,+#_e0f8743d21fa0c91cd3f3d6cb4c9489ep@chr20:43726572..43726588, +
9.99e-30FFCP PHASE1:Hg19::chr2:227008823..227008831,-#_84a08882cc6a08184f54ba990bb1b87ep@chr2:227008823..227008831, -
9.99e-30FFCP PHASE2:Hg19::chr2:227008823..227008831,-#_84a08882cc6a08184f54ba990bb1b87ep@chr2:227008823..227008831, -
1.33e-29FFCP PHASE2:Hg19::chr17:71333971..71333975,-#_fa168ec4d64ad59f624b5c7b0f45ac72p@chr17:71333971..71333975, -
1.33e-29FFCP PHASE1:Hg19::chr17:71333971..71333975,-#_fa168ec4d64ad59f624b5c7b0f45ac72p@chr17:71333971..71333975, -
2.37e-29FFCP PHASE2:Hg19::chr1:19403546..19403571,-#_ac5f42133bb031cdfc4fdd2744c98108p@chr1:19403546..19403571, -
2.37e-29FFCP PHASE1:Hg19::chr1:19403546..19403571,-#_ac5f42133bb031cdfc4fdd2744c98108p@chr1:19403546..19403571, -
3.16e-29FFCP PHASE2:Hg19::chr5:1882170..1882182,-#_8ca36f99a8146af7d001dad9f9ede3c4p3@IRX4
3.16e-29FFCP PHASE1:Hg19::chr5:1882170..1882182,-#_8ca36f99a8146af7d001dad9f9ede3c4p3@IRX4
4.61e-26FFCP PHASE2:Hg19::chr11:8795787..8795804,-#_8179529af0a64376f95934de111e6657p26@ST5
4.61e-26FFCP PHASE1:Hg19::chr11:8795787..8795804,-#_8179529af0a64376f95934de111e6657p26@ST5
5.93e-26FFCP PHASE1:Hg19::chr17:18907460..18907461,-#_ceaaeb25ce8fe858b4fc0a18f70deba3p12@FAM83G
5.93e-26FFCP PHASE2:Hg19::chr17:18907460..18907461,-#_ceaaeb25ce8fe858b4fc0a18f70deba3p12@FAM83G
5.93e-26FFCP PHASE2:Hg19::chr1:153533849..153533860,-#_ceaaeb25ce8fe858b4fc0a18f70deba3p@chr1:153533849..153533860, -
5.93e-26FFCP PHASE1:Hg19::chr1:153533849..153533860,-#_ceaaeb25ce8fe858b4fc0a18f70deba3p@chr1:153533849..153533860, -
5.93e-26FFCP PHASE1:Hg19::chr16:87865427..87865438,-#_ceaaeb25ce8fe858b4fc0a18f70deba3p28@SLC7A5
5.93e-26FFCP PHASE2:Hg19::chr16:87865427..87865438,-#_ceaaeb25ce8fe858b4fc0a18f70deba3p28@SLC7A5
2.1e-23FFCP PHASE2:Hg19::chr3:38017384..38017388,+#_02027fcec379a1d659ab4dac18469601p@chr3:38017384..38017388, +
2.1e-23FFCP PHASE1:Hg19::chr3:38017384..38017388,+#_02027fcec379a1d659ab4dac18469601p@chr3:38017384..38017388, +
3.28e-23FFCP PHASE2:Hg19::chr12:52884676..52884706,-#_31ad00f6c68c5b210b0430edf21dbb9ap13@KRT6A
3.28e-23FFCP PHASE2:Hg19::chr17:73737085..73737088,+#_31ad00f6c68c5b210b0430edf21dbb9ap@chr17:73737085..73737088, +
3.28e-23FFCP PHASE1:Hg19::chr17:73737085..73737088,+#_31ad00f6c68c5b210b0430edf21dbb9ap@chr17:73737085..73737088, +
3.28e-23FFCP PHASE2:Hg19::chr5:150970911..150970920,-#_31ad00f6c68c5b210b0430edf21dbb9ap3@FAT2
3.28e-23FFCP PHASE1:Hg19::chr5:150970911..150970920,-#_31ad00f6c68c5b210b0430edf21dbb9ap3@FAT2
3.28e-23FFCP PHASE1:Hg19::chr12:52884676..52884706,-#_31ad00f6c68c5b210b0430edf21dbb9ap13@KRT6A
5.13e-23FFCP PHASE2:Hg19::chr13:61507880..61507904,-#_a392ad1fcef8444e613e087c13566585p@chr13:61507880..61507904, -
5.13e-23FFCP PHASE1:Hg19::chr13:61507880..61507904,-#_a392ad1fcef8444e613e087c13566585p@chr13:61507880..61507904, -
2.82e-21FFCP PHASE1:Hg19::chr7:158196067..158196075,-#_f6725b4d563d566b4078dbde03707756p@chr7:158196067..158196075, -
2.82e-21FFCP PHASE1:Hg19::chr17:38632125..38632156,-#_f6725b4d563d566b4078dbde03707756p@chr17:38632125..38632156, -
2.82e-21FFCP PHASE2:Hg19::chr17:38632125..38632156,-#_f6725b4d563d566b4078dbde03707756p@chr17:38632125..38632156, -
2.82e-21FFCP PHASE2:Hg19::chr7:158196067..158196075,-#_f6725b4d563d566b4078dbde03707756p@chr7:158196067..158196075, -
4.22e-21FFCP PHASE2:Hg19::chr16:2030183..2030227,-#_a62ae2afdc64125fc90d34c7fc62db5cp@chr16:2030183..2030227, -
4.22e-21FFCP PHASE1:Hg19::chr16:2030183..2030227,-#_a62ae2afdc64125fc90d34c7fc62db5cp@chr16:2030183..2030227, -
5.16e-21FFCP PHASE2:Hg19::chr9:131675060..131675070,+#_42cf115a9afb575fac5068a6ea566a54p40@LRRC8A
5.16e-21FFCP PHASE1:Hg19::chr9:131675060..131675070,+#_42cf115a9afb575fac5068a6ea566a54p40@LRRC8A
7.72e-21FFCP PHASE1:Hg19::chr16:70731529..70731532,-#_3adb40724f8672edcbe3dc77a9d2472ep@chr16:70731529..70731532, -
7.72e-21FFCP PHASE2:Hg19::chr16:70731529..70731532,-#_3adb40724f8672edcbe3dc77a9d2472ep@chr16:70731529..70731532, -
9.43e-21FFCP PHASE2:Hg19::chr17:79061332..79061350,+#_6400fa01a42369ed708e7c5378e45b80p@chr17:79061332..79061350, +
9.43e-21FFCP PHASE1:Hg19::chr17:79061332..79061350,+#_6400fa01a42369ed708e7c5378e45b80p@chr17:79061332..79061350, +
1.3e-19FFCP PHASE2:Hg19::chr6:44096519..44096530,-#_a5273d4799fb9cae0ecfe569200728cap@chr6:44096519..44096530, -
1.3e-19FFCP PHASE1:Hg19::chr6:44096519..44096530,-#_a5273d4799fb9cae0ecfe569200728cap@chr6:44096519..44096530, -
2.25e-19FFCP PHASE1:Hg19::chr17:39778698..39778748,-#_17f65a0cedd3394be7e38e6e5359cc21p@chr17:39778698..39778748, -
2.25e-19FFCP PHASE2:Hg19::chr17:39778698..39778748,-#_17f65a0cedd3394be7e38e6e5359cc21p@chr17:39778698..39778748, -
2.71e-19FFCP PHASE2:Hg19::chr14:23777630..23777642,-#_236937de9425d10e783ab5a690e2b071p@chr14:23777630..23777642, -
2.71e-19FFCP PHASE1:Hg19::chr14:23777630..23777642,-#_236937de9425d10e783ab5a690e2b071p@chr14:23777630..23777642, -
3.25e-19FFCP PHASE2:Hg19::chr16:57954525..57954533,-#_82824f43d8e853f749cc0db7d0c17230p@chr16:57954525..57954533, -
3.25e-19FFCP PHASE1:Hg19::chr16:57954525..57954533,-#_82824f43d8e853f749cc0db7d0c17230p@chr16:57954525..57954533, -
3.16e-18FFCP PHASE2:Hg19::chr19:13692483..13692485,-#_d0efe0440cb1ced4fd752092f075c7e8p@chr19:13692483..13692485, -
3.16e-18FFCP PHASE1:Hg19::chr19:13692483..13692485,-#_d0efe0440cb1ced4fd752092f075c7e8p@chr19:13692483..13692485, -
4.44e-18FFCP PHASE1:Hg19::chr4:6955908..6955919,+#_fed6ee05ac954389b07a47ef1d3ddd43p9@TBC1D14
4.44e-18FFCP PHASE1:Hg19::chr16:66945145..66945152,-#_fed6ee05ac954389b07a47ef1d3ddd43p@chr16:66945145..66945152, -
4.44e-18FFCP PHASE2:Hg19::chr16:66945145..66945152,-#_fed6ee05ac954389b07a47ef1d3ddd43p@chr16:66945145..66945152, -
4.44e-18FFCP PHASE2:Hg19::chr4:6955908..6955919,+#_fed6ee05ac954389b07a47ef1d3ddd43p9@TBC1D14
6.23e-18FFCP PHASE2:Hg19::chr12:28125953..28125964,-#_730f36d340e16bba1af876c0ea2b47d3p17@PTHLH
6.23e-18FFCP PHASE2:Hg19::chr11:128812910..128812927,-#_730f36d340e16bba1af876c0ea2b47d3p2@TP53AIP1
6.23e-18FFCP PHASE2:Hg19::chr17:74582227..74582230,-#_730f36d340e16bba1af876c0ea2b47d3p10@ST6GALNAC2
6.23e-18FFCP PHASE1:Hg19::chr17:74582227..74582230,-#_730f36d340e16bba1af876c0ea2b47d3p10@ST6GALNAC2
6.23e-18FFCP PHASE1:Hg19::chr12:28125953..28125964,-#_730f36d340e16bba1af876c0ea2b47d3p17@PTHLH
6.23e-18FFCP PHASE1:Hg19::chr11:128812910..128812927,-#_730f36d340e16bba1af876c0ea2b47d3p2@TP53AIP1
7.37e-18FFCP PHASE2:Hg19::chr3:126676298..126676310,+#_096ffe6beae0c05038515422db29246bp@chr3:126676298..126676310, +
7.37e-18FFCP PHASE1:Hg19::chr3:126676298..126676310,+#_096ffe6beae0c05038515422db29246bp@chr3:126676298..126676310, +
1.22e-17FFCP PHASE1:Hg19::chr17:38633789..38633809,+#_50315a39cc2015eabcb76afbfe60e2bbp@chr17:38633789..38633809, +
1.22e-17FFCP PHASE2:Hg19::chr17:38633789..38633809,+#_50315a39cc2015eabcb76afbfe60e2bbp@chr17:38633789..38633809, +
7.57e-17FFCP PHASE1:Hg19::chr11:72939150..72939161,+#_4026f447024edf516b5b4e5a7f8d5ab5p@chr11:72939150..72939161, +
7.57e-17FFCP PHASE2:Hg19::chr21:38631055..38631068,-#_4026f447024edf516b5b4e5a7f8d5ab5p@chr21:38631055..38631068, -
7.57e-17FFCP PHASE1:Hg19::chr21:38631055..38631068,-#_4026f447024edf516b5b4e5a7f8d5ab5p@chr21:38631055..38631068, -
7.57e-17FFCP PHASE2:Hg19::chr11:72939150..72939161,+#_4026f447024edf516b5b4e5a7f8d5ab5p@chr11:72939150..72939161, +
1.21e-16FFCP PHASE1:Hg19::chr17:60782123..60782133,+#_562cfa33bd5d44fcab564d0c52bf5f5ep@chr17:60782123..60782133, +
1.21e-16FFCP PHASE2:Hg19::chr1:236558370..236558376,+#_562cfa33bd5d44fcab564d0c52bf5f5ep8@EDARADD
1.21e-16FFCP PHASE1:Hg19::chr1:236558370..236558376,+#_562cfa33bd5d44fcab564d0c52bf5f5ep8@EDARADD
1.21e-16FFCP PHASE2:Hg19::chr17:60782123..60782133,+#_562cfa33bd5d44fcab564d0c52bf5f5ep@chr17:60782123..60782133, +
1.41e-16FFCP PHASE2:Hg19::chr12:52774351..52774355,+#_15dabd48d603e7cde11a8e30ddab4569p1@ENST00000547174
1.41e-16FFCP PHASE1:Hg19::chr12:116955659..116955671,+#_15dabd48d603e7cde11a8e30ddab4569p1@ENST00000552992
1.41e-16FFCP PHASE2:Hg19::chr12:116955659..116955671,+#_15dabd48d603e7cde11a8e30ddab4569p1@ENST00000552992
1.41e-16FFCP PHASE1:Hg19::chr12:52774351..52774355,+#_15dabd48d603e7cde11a8e30ddab4569p1@ENST00000547174
1.65e-16FFCP PHASE1:Hg19::chr12:52908434..52908443,-#_8fc8a9d591422716c6d377973b217389p@chr12:52908434..52908443, -
1.65e-16FFCP PHASE2:Hg19::chr12:52908434..52908443,-#_8fc8a9d591422716c6d377973b217389p@chr12:52908434..52908443, -
1.93e-16FFCP PHASE2:Hg19::chr2:231649545..231649550,-#_c92defd795284fa778ac635c3d6ee731p@chr2:231649545..231649550, -
1.93e-16FFCP PHASE1:Hg19::chr2:231649545..231649550,-#_c92defd795284fa778ac635c3d6ee731p@chr2:231649545..231649550, -
2.25e-16FFCP PHASE2:Hg19::chr17:80575169..80575172,-#_f77d8f6b59856f75f6c5f7dc03cfa46fp@chr17:80575169..80575172, -
2.25e-16FFCP PHASE1:Hg19::chr17:80575169..80575172,-#_f77d8f6b59856f75f6c5f7dc03cfa46fp@chr17:80575169..80575172, -
8.63e-16FFCP PHASE2:Hg19::chr17:74582066..74582075,-#_2ac95de73b4ef8a96a038f9834732358p9@ST6GALNAC2
8.63e-16FFCP PHASE1:Hg19::chr17:74582066..74582075,-#_2ac95de73b4ef8a96a038f9834732358p9@ST6GALNAC2
1.78e-15FFCP PHASE2:Hg19::chr21:44957855..44957891,-#_97e1eb08373931610f4f17adcce4c3d2p@chr21:44957855..44957891, -
1.78e-15FFCP PHASE1:Hg19::chr21:44957855..44957891,-#_97e1eb08373931610f4f17adcce4c3d2p@chr21:44957855..44957891, -
2.38e-15FFCP PHASE1:Hg19::chr22:46933762..46933780,+#_a3c9a5e84f23b0513d642573af46a8dbp@chr22:46933762..46933780, +
2.38e-15FFCP PHASE2:Hg19::chr22:46933762..46933780,+#_a3c9a5e84f23b0513d642573af46a8dbp@chr22:46933762..46933780, +
5.42e-15FFCP PHASE1:Hg19::chr12:52887237..52887248,-#_07a2be153fd5f5b809abda912fd0391bp12@KRT6A
5.42e-15FFCP PHASE2:Hg19::chr12:52887237..52887248,-#_07a2be153fd5f5b809abda912fd0391bp12@KRT6A
6.22e-15FFCP PHASE2:Hg19::chr4:3387240..3387255,+#_3d3b0b46db867bcd97be7c1acb04c245p13@RGS12
6.22e-15FFCP PHASE1:Hg19::chr4:3387240..3387255,+#_3d3b0b46db867bcd97be7c1acb04c245p13@RGS12