CL:0002360: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=AGM hematopoietic stem cell | |name=AGM hematopoietic stem cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2010-09-22T10:31:49Z | |obo_creation_date=2010-09-22T10:31:49Z | ||
|part_of= | |part_of= | ||
Latest revision as of 16:42, 12 September 2014
| Name: | AGM hematopoietic stem cell |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A hematopoietic stem cell from the aorta-gonad-mesonephros region of the developing embryo. First seen at E10.5 in mouse embryos. May give rise to fetal liver HSC." [GOC:tfm, ISBN:978-1-60327-346-6] |
| Created by: | tmeehan |
| Creation date: | 2010-09-22T10:31:49Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002352(gestational hematopoietic stem cell) |
|---|
Children
| is a: | FF:11949-126B5 (hematopoietic stem cell, aorta-gonad-mesonephros (AGM) region derived, embryo E10.5) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11949-126B5 (hematopoietic stem cell, aorta-gonad-mesonephros (AGM) region derived, embryo E10.5)
Mouse (Mus musculus)
- 11949-126B5 (hematopoietic stem cell, aorta-gonad-mesonephros (AGM) region derived, embryo E10.5)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002360 (AGM hematopoietic stem cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
