Personal tools

CL:0002379: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0002379
|alt_id=
|name=meningothelial cell
|namespace=cell
|def="A neurecto-epithelial cell found in the arachnoid villi of dura mater. This cell type facilitates flow of cerebrospinal fluid into the blood." [GOC:tfm, http://www.aippg.net/forum/viewtopic.php?t=62590]
|xref=FMA:86588
|is_a=CL:0000710
|synonym="arachnoid cap cell" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-28T02:23:46Z
|def="A neurecto-epithelial cell found in the arachnoid villi of dura mater. This cell type facilitates flow of cerebrospinal fluid into the blood." [GOC:tfm, http://www.aippg.net/forum/viewtopic.php?t
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002379
|is_a=CL:0000710
|is_obsolete=
|located_in=
|located_in=
|name=meningothelial cell
|namespace=FANTOM
|obo_creation_date=2010-09-28T02:23:46Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="arachnoid cap cell" EXACT []
|union_of=
|xref=FMA:86588
}}
}}

Latest revision as of 16:42, 12 September 2014

Name:meningothelial cell
Namespace:FANTOM
Definition:"A neurecto-epithelial cell found in the arachnoid villi of dura mater. This cell type facilitates flow of cerebrospinal fluid into the blood." [GOC:tfm, http://www.aippg.net/forum/viewtopic.php?t
Xrefs:
links:
FMA:86588
Synonyms: "arachnoid cap cell" EXACT []
Created by:tmeehan
Creation date:2010-09-28T02:23:46Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000710(neurecto-epithelial cell)



Children


is a:FF:10691-109F7 (meningioma cell line:HKBMM)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002379 (meningothelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr10:45295885..45295915,-#_db8e345d84ca4883503f20247bfa2f65p@chr10:45295885..45295915, -
5.42e-195FFCP PHASE1:Hg19::chr10:45295885..45295915,-#_db8e345d84ca4883503f20247bfa2f65p@chr10:45295885..45295915, -
9.37e-99FFCP PHASE2:Hg19::chr12:12094754..12094758,+#_29f7b87442be64c3e8a25bdef13b9b71p@chr12:12094754..12094758, +
9.37e-99FFCP PHASE1:Hg19::chr12:12094754..12094758,+#_29f7b87442be64c3e8a25bdef13b9b71p@chr12:12094754..12094758, +
1.23e-66FFCP PHASE1:Hg19::chr2:235107734..235107745,-#_e992895e2b328e15b71cf167877170efp@chr2:235107734..235107745, -
1.23e-66FFCP PHASE2:Hg19::chr2:235107734..235107745,-#_e992895e2b328e15b71cf167877170efp@chr2:235107734..235107745, -
2.39e-66FFCP PHASE1:Hg19::chr2:135170027..135170035,+#_1624b05f9d39401d86417f6d21eddee5p@chr2:135170027..135170035, +
2.39e-66FFCP PHASE2:Hg19::chr2:135170027..135170035,+#_1624b05f9d39401d86417f6d21eddee5p@chr2:135170027..135170035, +
4.66e-66FFCP PHASE1:Hg19::chr1:8251750..8251759,+#_176f63884a49e87d02be4c4c05a2ac45p@chr1:8251750..8251759, +
4.66e-66FFCP PHASE2:Hg19::chr1:8251750..8251759,+#_176f63884a49e87d02be4c4c05a2ac45p@chr1:8251750..8251759, +
1.46e-50FFCP PHASE1:Hg19::chr5:174151841..174151852,+#_87d652a04b42e6c8ca99b1b544cc4eb8p7@MSX2
1.46e-50FFCP PHASE2:Hg19::chr5:174151841..174151852,+#_87d652a04b42e6c8ca99b1b544cc4eb8p7@MSX2
1.46e-50FFCP PHASE1:Hg19::chr2:113668763..113668773,+#_87d652a04b42e6c8ca99b1b544cc4eb8p@chr2:113668763..113668773, +
1.46e-50FFCP PHASE2:Hg19::chr2:113668763..113668773,+#_87d652a04b42e6c8ca99b1b544cc4eb8p@chr2:113668763..113668773, +
1.46e-50FFCP PHASE2:Hg19::chr12:31158902..31158914,-#_87d652a04b42e6c8ca99b1b544cc4eb8p2@ENST00000544329
1.46e-50FFCP PHASE1:Hg19::chr12:31158902..31158914,-#_87d652a04b42e6c8ca99b1b544cc4eb8p2@ENST00000544329
2.42e-50FFCP PHASE2:Hg19::chr12:52698999..52699008,+#_e8e3fe0ef7aac112bb0db10c27ed8ac7p@chr12:52698999..52699008, +
2.42e-50FFCP PHASE1:Hg19::chr12:52698999..52699008,+#_e8e3fe0ef7aac112bb0db10c27ed8ac7p@chr12:52698999..52699008, +
6.62e-41FFCP PHASE1:Hg19::chr7:142563227..142563251,+#_25a43f14b03d20f13f006e9b42cd566fp@chr7:142563227..142563251, +
6.62e-41FFCP PHASE2:Hg19::chr7:142563227..142563251,+#_25a43f14b03d20f13f006e9b42cd566fp@chr7:142563227..142563251, +
9.91e-41FFCP PHASE2:Hg19::chr16:86612112..86612123,+#_6f4d58f2a2a0f1ac0d91871bb729aa41p5@FOXL1
9.91e-41FFCP PHASE1:Hg19::chr16:86612112..86612123,+#_6f4d58f2a2a0f1ac0d91871bb729aa41p5@FOXL1
1.48e-40FFCP PHASE2:Hg19::chr12:52679917..52679933,-#_eb1dc59c4aa8a17d346284e2dd1a91a5p@chr12:52679917..52679933, -
1.48e-40FFCP PHASE1:Hg19::chr12:52679917..52679933,-#_eb1dc59c4aa8a17d346284e2dd1a91a5p@chr12:52679917..52679933, -
2.21e-40FFCP PHASE1:Hg19::chr19:41447981..41448001,+#_b33fdb66a0ac71d7dc2a78d8bd900e36p@chr19:41447981..41448001, +
2.21e-40FFCP PHASE2:Hg19::chr19:41447981..41448001,+#_b33fdb66a0ac71d7dc2a78d8bd900e36p@chr19:41447981..41448001, +
2.21e-40FFCP PHASE2:Hg19::chr17:22069559..22069568,-#_b33fdb66a0ac71d7dc2a78d8bd900e36p@chr17:22069559..22069568, -
2.21e-40FFCP PHASE1:Hg19::chr17:22069559..22069568,-#_b33fdb66a0ac71d7dc2a78d8bd900e36p@chr17:22069559..22069568, -
2.58e-34FFCP PHASE2:Hg19::chr15:69339407..69339410,+#_804099228b670739dbbb9daad713f9d3p3@NOX5
2.58e-34FFCP PHASE1:Hg19::chr15:69339407..69339410,+#_804099228b670739dbbb9daad713f9d3p3@NOX5
3.61e-34FFCP PHASE1:Hg19::chr16:83033869..83033872,+#_33f418158fc3d69568447db30f60a172p@chr16:83033869..83033872, +
3.61e-34FFCP PHASE2:Hg19::chr16:83033869..83033872,+#_33f418158fc3d69568447db30f60a172p@chr16:83033869..83033872, +
5.05e-34FFCP PHASE1:Hg19::chr2:113562551..113562554,-#_818d042b2caf4f155a5e4ea276476bcep@chr2:113562551..113562554, -
5.05e-34FFCP PHASE2:Hg19::chr2:113562551..113562554,-#_818d042b2caf4f155a5e4ea276476bcep@chr2:113562551..113562554, -
7.06e-34FFCP PHASE2:Hg19::chr17:30059110..30059117,+#_e989466fb3dc5b337037216a654c1a59p@chr17:30059110..30059117, +
7.06e-34FFCP PHASE1:Hg19::chr20:50245629..50245639,-#_e989466fb3dc5b337037216a654c1a59p@chr20:50245629..50245639, -
7.06e-34FFCP PHASE2:Hg19::chr20:50245629..50245639,-#_e989466fb3dc5b337037216a654c1a59p@chr20:50245629..50245639, -
7.06e-34FFCP PHASE1:Hg19::chr17:30059110..30059117,+#_e989466fb3dc5b337037216a654c1a59p@chr17:30059110..30059117, +
7.06e-34FFCP PHASE1:Hg19::chr18:60262589..60262593,+#_e989466fb3dc5b337037216a654c1a59p@chr18:60262589..60262593, +
7.06e-34FFCP PHASE2:Hg19::chr18:60262589..60262593,+#_e989466fb3dc5b337037216a654c1a59p@chr18:60262589..60262593, +
7.06e-34FFCP PHASE1:Hg19::chr7:3284005..3284016,-#_e989466fb3dc5b337037216a654c1a59p@chr7:3284005..3284016, -
7.06e-34FFCP PHASE2:Hg19::chr7:3284005..3284016,-#_e989466fb3dc5b337037216a654c1a59p@chr7:3284005..3284016, -
9.85e-34FFCP PHASE1:Hg19::chr9:127635073..127635077,+#_c5e962e2766680f8953348057aea4105p7@ARPC5L
9.85e-34FFCP PHASE2:Hg19::chr9:127635073..127635077,+#_c5e962e2766680f8953348057aea4105p7@ARPC5L
7.48e-30FFCP PHASE1:Hg19::chr22:33265699..33265702,+#_2749126d18211787d587ba0e0ed4dde8p@chr22:33265699..33265702, +
7.48e-30FFCP PHASE2:Hg19::chr22:33265699..33265702,+#_2749126d18211787d587ba0e0ed4dde8p@chr22:33265699..33265702, +
9.99e-30FFCP PHASE2:Hg19::chr16:83371254..83371258,+#_798f0c594ad68fef520dc01492dc629ap@chr16:83371254..83371258, +
9.99e-30FFCP PHASE1:Hg19::chr16:83371254..83371258,+#_798f0c594ad68fef520dc01492dc629ap@chr16:83371254..83371258, +
2.37e-29FFCP PHASE1:Hg19::chr5:1882184..1882203,-#_2d6d2a089336a2e704693fb11530802dp4@IRX4
2.37e-29FFCP PHASE2:Hg19::chr5:1882184..1882203,-#_2d6d2a089336a2e704693fb11530802dp4@IRX4
3.16e-29FFCP PHASE1:Hg19::chr19:28936188..28936202,+#_d87482aa7b25f1a701648b4465da8c97p@chr19:28936188..28936202, +
3.16e-29FFCP PHASE2:Hg19::chr19:28936188..28936202,+#_d87482aa7b25f1a701648b4465da8c97p@chr19:28936188..28936202, +
4.2e-29FFCP PHASE1:Hg19::chr21:43771226..43771242,-#_5dd19d90392b0b0a7643d3d96ebf04e0p3@TFF2
4.2e-29FFCP PHASE2:Hg19::chr21:43771226..43771242,-#_5dd19d90392b0b0a7643d3d96ebf04e0p3@TFF2
2.16e-26FFCP PHASE1:Hg19::chr6:31304866..31304870,-#_f29d88d01751459133d60c724db3801fp@chr6:31304866..31304870, -
2.16e-26FFCP PHASE2:Hg19::chr6:31304866..31304870,-#_f29d88d01751459133d60c724db3801fp@chr6:31304866..31304870, -
2.78e-26FFCP PHASE1:Hg19::chr20:49983328..49983340,+#_a6cbded24b798fb5d2b58786935cd6cap@chr20:49983328..49983340, +
2.78e-26FFCP PHASE2:Hg19::chr20:49983328..49983340,+#_a6cbded24b798fb5d2b58786935cd6cap@chr20:49983328..49983340, +
3.58e-26FFCP PHASE2:Hg19::chr11:121910956..121910960,-#_c6e5849aa6bc0fe6cd28b45749821214p@chr11:121910956..121910960, -
3.58e-26FFCP PHASE1:Hg19::chr11:121910956..121910960,-#_c6e5849aa6bc0fe6cd28b45749821214p@chr11:121910956..121910960, -
4.61e-26FFCP PHASE2:Hg19::chr9:21468453..21468457,-#_6a982261fcaf1659bc3c477a435439d9p@chr9:21468453..21468457, -
4.61e-26FFCP PHASE1:Hg19::chr9:21468453..21468457,-#_6a982261fcaf1659bc3c477a435439d9p@chr9:21468453..21468457, -
5.93e-26FFCP PHASE1:Hg19::chr1:91328490..91328494,-#_302082f0a89417fad902db3132bce6b8p@chr1:91328490..91328494, -
5.93e-26FFCP PHASE2:Hg19::chr1:91328490..91328494,-#_302082f0a89417fad902db3132bce6b8p@chr1:91328490..91328494, -
9.79e-26FFCP PHASE1:Hg19::chr11:10066159..10066186,-#_bae046f42a67f9cfe9f3e484f8cf037cp3@SBF2
9.79e-26FFCP PHASE1:Hg19::chr6:31815396..31815402,+#_bae046f42a67f9cfe9f3e484f8cf037cp@chr6:31815396..31815402, +
9.79e-26FFCP PHASE2:Hg19::chr6:31815396..31815402,+#_bae046f42a67f9cfe9f3e484f8cf037cp@chr6:31815396..31815402, +
9.79e-26FFCP PHASE2:Hg19::chr11:10066159..10066186,-#_bae046f42a67f9cfe9f3e484f8cf037cp3@SBF2
1.26e-25FFCP PHASE1:Hg19::chr2:135170403..135170416,+#_3d25d48374e84762aa36422b54dc9dd7p@chr2:135170403..135170416, +
1.26e-25FFCP PHASE2:Hg19::chr2:135170403..135170416,+#_3d25d48374e84762aa36422b54dc9dd7p@chr2:135170403..135170416, +
1.07e-23FFCP PHASE2:Hg19::chr14:65823553..65823594,+#_78911e2325c13bd2c15303cdd759b59ep@chr14:65823553..65823594, +
1.07e-23FFCP PHASE1:Hg19::chr14:65823553..65823594,+#_78911e2325c13bd2c15303cdd759b59ep@chr14:65823553..65823594, +
1.07e-23FFCP PHASE1:Hg19::chr7:142558870..142558879,-#_78911e2325c13bd2c15303cdd759b59ep@chr7:142558870..142558879, -
1.07e-23FFCP PHASE2:Hg19::chr7:142558870..142558879,-#_78911e2325c13bd2c15303cdd759b59ep@chr7:142558870..142558879, -
1.34e-23FFCP PHASE2:Hg19::chr14:102704175..102704202,-#_c1cdfcca5c5fd423d6017e133f6e9d07p@chr14:102704175..102704202, -
1.34e-23FFCP PHASE1:Hg19::chr14:102704175..102704202,-#_c1cdfcca5c5fd423d6017e133f6e9d07p@chr14:102704175..102704202, -
2.62e-23FFCP PHASE2:Hg19::chr11:1213314..1213323,+#_31ba1391868232c03f973516de89e213p7@uc001lsz.2
2.62e-23FFCP PHASE1:Hg19::chr11:1213314..1213323,+#_31ba1391868232c03f973516de89e213p7@uc001lsz.2
4.1e-23FFCP PHASE1:Hg19::chr1:33608427..33608437,-#_8c365d1e1bdd59036854db32ccdf0261p2@uc001bxa.1
4.1e-23FFCP PHASE2:Hg19::chr1:33608427..33608437,-#_8c365d1e1bdd59036854db32ccdf0261p2@uc001bxa.1
4.1e-23FFCP PHASE2:Hg19::chr14:102704788..102704801,-#_8c365d1e1bdd59036854db32ccdf0261p10@MOK
4.1e-23FFCP PHASE1:Hg19::chr14:102704788..102704801,-#_8c365d1e1bdd59036854db32ccdf0261p10@MOK
4.1e-23FFCP PHASE2:Hg19::chr15:101445820..101445832,-#_8c365d1e1bdd59036854db32ccdf0261p@chr15:101445820..101445832, -
4.1e-23FFCP PHASE1:Hg19::chr15:101445820..101445832,-#_8c365d1e1bdd59036854db32ccdf0261p@chr15:101445820..101445832, -
6.4e-23FFCP PHASE2:Hg19::chr11:119461966..119461970,+#_3ed7f37d10acc1e65e5c64408fdb72a2p@chr11:119461966..119461970, +
6.4e-23FFCP PHASE1:Hg19::chr11:119461966..119461970,+#_3ed7f37d10acc1e65e5c64408fdb72a2p@chr11:119461966..119461970, +
1.53e-21FFCP PHASE2:Hg19::chr12:52680234..52680245,-#_e4fdb02dadf61b58aee7690473598054p@chr12:52680234..52680245, -
1.53e-21FFCP PHASE1:Hg19::chr12:52680234..52680245,-#_e4fdb02dadf61b58aee7690473598054p@chr12:52680234..52680245, -
1.53e-21FFCP PHASE2:Hg19::chr12:52681676..52681679,-#_e4fdb02dadf61b58aee7690473598054p6@KRT81
1.53e-21FFCP PHASE1:Hg19::chr12:52681676..52681679,-#_e4fdb02dadf61b58aee7690473598054p6@KRT81
1.53e-21FFCP PHASE1:Hg19::chr1:20407255..20407264,+#_e4fdb02dadf61b58aee7690473598054p@chr1:20407255..20407264, +
1.53e-21FFCP PHASE1:Hg19::chr2:126569768..126569794,+#_e4fdb02dadf61b58aee7690473598054p@chr2:126569768..126569794, +
1.53e-21FFCP PHASE2:Hg19::chr1:20407255..20407264,+#_e4fdb02dadf61b58aee7690473598054p@chr1:20407255..20407264, +
1.53e-21FFCP PHASE2:Hg19::chr2:126569768..126569794,+#_e4fdb02dadf61b58aee7690473598054p@chr2:126569768..126569794, +
1.88e-21FFCP PHASE1:Hg19::chr3:111631881..111631893,+#_38c000323b69e18e8e7674b99d553512p@chr3:111631881..111631893, +
1.88e-21FFCP PHASE2:Hg19::chr3:111631881..111631893,+#_38c000323b69e18e8e7674b99d553512p@chr3:111631881..111631893, +
2.3e-21FFCP PHASE1:Hg19::chr22:28329197..28329214,-#_bfbef7f3876c72cfd5cd77288ec2e419p@chr22:28329197..28329214, -
2.3e-21FFCP PHASE2:Hg19::chr22:28329197..28329214,-#_bfbef7f3876c72cfd5cd77288ec2e419p@chr22:28329197..28329214, -
2.3e-21FFCP PHASE2:Hg19::chr11:329487..329504,-#_bfbef7f3876c72cfd5cd77288ec2e419p@chr11:329487..329504, -
2.3e-21FFCP PHASE1:Hg19::chr11:329487..329504,-#_bfbef7f3876c72cfd5cd77288ec2e419p@chr11:329487..329504, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0002379&oldid=3275464"