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CL:0002504

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Name:enteric smooth muscle cell
Namespace:FANTOM
Definition:"A smooth muscle cell of the intestine." [GOC:tfm]
Synonyms: "intestinal smooth muscle cell" EXACT []
Created by:tmeehan
Creation date:2011-01-17T03:39:38Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000192(smooth muscle cell)
part_of:UBERON:0000160(intestine)



Children


is a:CL:1000279 (smooth muscle cell of large intestine)
derives from:FF:0000180 (human smooth muscle cell of intestine sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002504 (enteric smooth muscle cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
8.98e-131FFCP PHASE1:Hg19::chr12:52473515..52473526,+#_6544bc9c008a583468edb14931e4af8dp3@ENST00000546390, p3@uc009zme.1
8.98e-131FFCP PHASE2:Hg19::chr12:52473515..52473526,+#_6544bc9c008a583468edb14931e4af8dp3@ENST00000546390, p3@uc009zme.1
1.11e-98FFCP PHASE2:Hg19::chr20:49269691..49269695,+#_69217d0ee95f57fbd95adc2848d1aed0p1@ENST00000435177
1.11e-98FFCP PHASE1:Hg19::chr20:49269691..49269695,+#_69217d0ee95f57fbd95adc2848d1aed0p1@ENST00000435177
4.71e-66FFCP PHASE1:Hg19::chr12:52473502..52473510,+#_5c807a4dd41278525d45ae16535a26aep2@ENST00000546390, p2@uc009zme.1
4.71e-66FFCP PHASE2:Hg19::chr12:52473502..52473510,+#_5c807a4dd41278525d45ae16535a26aep2@ENST00000546390, p2@uc009zme.1
7.24e-50FFCP PHASE2:Hg19::chr3:177652390..177652395,+#_8227532eaf4a0f897cc2375503a33d13p1@ENST00000450500
7.24e-50FFCP PHASE1:Hg19::chr3:177652390..177652395,+#_8227532eaf4a0f897cc2375503a33d13p1@ENST00000450500
6.47e-47FFCP PHASE2:Hg19::chr13:94958134..94958164,+#_b2b36393e573678e8f30b2d01fc5e2c1p@chr13:94958134..94958164, +
6.47e-47FFCP PHASE1:Hg19::chr13:94958134..94958164,+#_b2b36393e573678e8f30b2d01fc5e2c1p@chr13:94958134..94958164, +
8.55e-40FFCP PHASE2:Hg19::chr2:114300263..114300269,-#_225e6ce2f856f89357c3260bdab33c8cp1@ENST00000416758
8.55e-40FFCP PHASE1:Hg19::chr2:114300263..114300269,-#_225e6ce2f856f89357c3260bdab33c8cp1@ENST00000416758
9.77e-40FFCP PHASE2:Hg19::chr16:86229885..86229905,+#_4cfa2b253bc5de5669b8ef4da2e5d302p@chr16:86229885..86229905, +
9.77e-40FFCP PHASE1:Hg19::chr16:86229885..86229905,+#_4cfa2b253bc5de5669b8ef4da2e5d302p@chr16:86229885..86229905, +
2.95e-37FFCP PHASE2:Hg19::chr16:86229916..86229943,+#_5e3d628caff05a8e9b7f957032a14bf3p@chr16:86229916..86229943, +
2.95e-37FFCP PHASE1:Hg19::chr16:86229916..86229943,+#_5e3d628caff05a8e9b7f957032a14bf3p@chr16:86229916..86229943, +
9.1e-34FFCP PHASE2:Hg19::chr6:31304866..31304870,-#_43e85a8a677c5420f4dbbd6d2b1379a8p@chr6:31304866..31304870, -
9.1e-34FFCP PHASE1:Hg19::chr6:31304866..31304870,-#_43e85a8a677c5420f4dbbd6d2b1379a8p@chr6:31304866..31304870, -
4.53e-30FFCP PHASE1:Hg19::chr8:120079398..120079416,+#_a7c202706066b0aff7044a51586d748fp3@COLEC10
4.53e-30FFCP PHASE2:Hg19::chr8:120079398..120079416,+#_a7c202706066b0aff7044a51586d748fp3@COLEC10
4.07e-27FFCP PHASE2:Hg19::chr6:134210625..134210636,+#_0a9875faa01045f80b092bb86f9de9e8p6@TCF21
4.07e-27FFCP PHASE1:Hg19::chr6:134210625..134210636,+#_0a9875faa01045f80b092bb86f9de9e8p6@TCF21
7.88e-27FFCP PHASE2:Hg19::chr18:77557973..77557984,+#_94730d7ab93bfb99fad6356d3417cb13p@chr18:77557973..77557984, +
7.88e-27FFCP PHASE1:Hg19::chr18:77557973..77557984,+#_94730d7ab93bfb99fad6356d3417cb13p@chr18:77557973..77557984, +
5.75e-26FFCP PHASE2:Hg19::chr1:78401534..78401545,+#_f284a682350f71962479c89653cf2fa6p@chr1:78401534..78401545, +
5.75e-26FFCP PHASE1:Hg19::chr1:78401534..78401545,+#_f284a682350f71962479c89653cf2fa6p@chr1:78401534..78401545, +
2.34e-25FFCP PHASE1:Hg19::chr15:50149374..50149385,+#_56e23b3d06cbea01f59a84e1a18d4b38p@chr15:50149374..50149385, +
2.34e-25FFCP PHASE2:Hg19::chr15:50149374..50149385,+#_56e23b3d06cbea01f59a84e1a18d4b38p@chr15:50149374..50149385, +
2.64e-25FFCP PHASE2:Hg19::chr7:136759435..136759447,+#_0ba0b2b434e04c096e166721903f8d5ap@chr7:136759435..136759447, +
2.64e-25FFCP PHASE1:Hg19::chr7:136759435..136759447,+#_0ba0b2b434e04c096e166721903f8d5ap@chr7:136759435..136759447, +
2.64e-25FFCP PHASE2:Hg19::chr3:150966773..150966784,-#_0ba0b2b434e04c096e166721903f8d5ap7@P2RY14
2.64e-25FFCP PHASE1:Hg19::chr3:150966773..150966784,-#_0ba0b2b434e04c096e166721903f8d5ap7@P2RY14
6.22e-25FFCP PHASE1:Hg19::chr5:10237680..10237685,+#_cd908fc965c7dafe7f3d4faf436bba00p@chr5:10237680..10237685, +
6.22e-25FFCP PHASE2:Hg19::chr5:10237680..10237685,+#_cd908fc965c7dafe7f3d4faf436bba00p@chr5:10237680..10237685, +
3.62e-24FFCP PHASE2:Hg19::chr4:1167293..1167308,-#_226d24982038a2c585304015d94e577ep18@SPON2
3.62e-24FFCP PHASE1:Hg19::chr4:1167293..1167308,-#_226d24982038a2c585304015d94e577ep18@SPON2
5.35e-24FFCP PHASE1:Hg19::chr16:86229728..86229756,+#_6458ca5ac80c3b7a57b72ae3fd004298p@chr16:86229728..86229756, +
5.35e-24FFCP PHASE2:Hg19::chr16:86229728..86229756,+#_6458ca5ac80c3b7a57b72ae3fd004298p@chr16:86229728..86229756, +
1.88e-23FFCP PHASE2:Hg19::chr3:150966718..150966738,-#_1631fd41c0ec9787d23a0af37d2b163bp9@P2RY14
1.88e-23FFCP PHASE1:Hg19::chr3:150966718..150966738,-#_1631fd41c0ec9787d23a0af37d2b163bp9@P2RY14
2.62e-23FFCP PHASE2:Hg19::chr8:109482025..109482032,+#_ba0e12e26788c7fb148c7ca32f63cbf0p@chr8:109482025..109482032, +
2.62e-23FFCP PHASE1:Hg19::chr8:109482025..109482032,+#_ba0e12e26788c7fb148c7ca32f63cbf0p@chr8:109482025..109482032, +
3.09e-23FFCP PHASE2:Hg19::chr4:120549834..120549846,-#_b2bb03ef6702ebe05aef2841ad104785p15@PDE5A
3.09e-23FFCP PHASE1:Hg19::chr4:120549834..120549846,-#_b2bb03ef6702ebe05aef2841ad104785p15@PDE5A
4.66e-22FFCP PHASE1:Hg19::chr9:113137742..113137746,-#_9ec51ce9b94558722b4fe47202504c42p@chr9:113137742..113137746, -
4.66e-22FFCP PHASE2:Hg19::chr9:113137742..113137746,-#_9ec51ce9b94558722b4fe47202504c42p@chr9:113137742..113137746, -
1.59e-21FFCP PHASE2:Hg19::chr3:150966697..150966714,-#_be930b8efde7a5888ac2e0453616397ap8@P2RY14
1.59e-21FFCP PHASE1:Hg19::chr3:150966697..150966714,-#_be930b8efde7a5888ac2e0453616397ap8@P2RY14
1.76e-21FFCP PHASE1:Hg19::chr3:150966861..150966873,-#_ab7ffd41c76fe711a4f82a69d73c23f7p6@P2RY14
1.76e-21FFCP PHASE2:Hg19::chr3:150966861..150966873,-#_ab7ffd41c76fe711a4f82a69d73c23f7p6@P2RY14
2.67e-21FFCP PHASE2:Hg19::chr18:77557932..77557943,+#_701319d14a92c275dfe23b3d4c23f411p@chr18:77557932..77557943, +
2.67e-21FFCP PHASE1:Hg19::chr18:77557932..77557943,+#_701319d14a92c275dfe23b3d4c23f411p@chr18:77557932..77557943, +
5.41e-21FFCP PHASE2:Hg19::chr1:246151834..246151867,-#_a1bd87d7b99572b40b17d89b1caa1439p4@SMYD3
5.41e-21FFCP PHASE1:Hg19::chr1:246151834..246151867,-#_a1bd87d7b99572b40b17d89b1caa1439p4@SMYD3
7.12e-21FFCP PHASE2:Hg19::chr5:52096217..52096226,+#_8c1c429c71a78fd82d823ae6b0e865fep11@PELO
7.12e-21FFCP PHASE1:Hg19::chr5:52096217..52096226,+#_8c1c429c71a78fd82d823ae6b0e865fep11@PELO
7.42e-21FFCP PHASE1:Hg19::chr5:34915414..34915420,+#_7d1f151fd4b51858a79e09a019444ec2p4@BRIX1
7.42e-21FFCP PHASE2:Hg19::chr5:34915414..34915420,+#_7d1f151fd4b51858a79e09a019444ec2p4@BRIX1
1.07e-20FFCP PHASE2:Hg19::chr8:120079417..120079436,+#_27534de31e6e01b0cfb3c2b8104a234dp2@COLEC10
1.07e-20FFCP PHASE1:Hg19::chr8:120079417..120079436,+#_27534de31e6e01b0cfb3c2b8104a234dp2@COLEC10
5.27e-20FFCP PHASE2:Hg19::chr6:134210095..134210147,-#_af1eca78712bf017aeb7142b4acaab7ap1@uc003qeg.1
5.27e-20FFCP PHASE1:Hg19::chr6:134210095..134210147,-#_af1eca78712bf017aeb7142b4acaab7ap1@uc003qeg.1
6.54e-20FFCP PHASE2:Hg19::chr9:118701892..118701903,+#_a2cd42955206c18ebd425b7b76781d1dp@chr9:118701892..118701903, +
6.54e-20FFCP PHASE1:Hg19::chr9:118701892..118701903,+#_a2cd42955206c18ebd425b7b76781d1dp@chr9:118701892..118701903, +
8.67e-20FFCP PHASE1:Hg19::chr15:50193489..50193500,-#_b9e7debc179e7615eb3331671ad3e2e3p@chr15:50193489..50193500, -
8.67e-20FFCP PHASE2:Hg19::chr15:50193489..50193500,-#_b9e7debc179e7615eb3331671ad3e2e3p@chr15:50193489..50193500, -
6.34e-19FFCP PHASE2:Hg19::chr9:118701819..118701835,+#_02fd0aa11ec3a02490ab0a0aa22f7933p@chr9:118701819..118701835, +
6.34e-19FFCP PHASE1:Hg19::chr9:118701819..118701835,+#_02fd0aa11ec3a02490ab0a0aa22f7933p@chr9:118701819..118701835, +
2.53e-18FFCP PHASE2:Hg19::chr7:150574212..150574225,-#_d7667a9354c0690177283c905ed43a13p@chr7:150574212..150574225, -
2.53e-18FFCP PHASE1:Hg19::chr7:150574212..150574225,-#_d7667a9354c0690177283c905ed43a13p@chr7:150574212..150574225, -
2.81e-18FFCP PHASE2:Hg19::chr1:246023808..246023820,-#_76f0b900112bbb0efd2922f2bb2eda20p@chr1:246023808..246023820, -
2.81e-18FFCP PHASE1:Hg19::chr1:246023808..246023820,-#_76f0b900112bbb0efd2922f2bb2eda20p@chr1:246023808..246023820, -
9.46e-18FFCP PHASE1:Hg19::chr10:62677334..62677342,-#_01a93bb6c809bd1f0605d767059bd6c5p@chr10:62677334..62677342, -
9.46e-18FFCP PHASE2:Hg19::chr4:120546882..120546885,-#_01a93bb6c809bd1f0605d767059bd6c5p@chr4:120546882..120546885, -
9.46e-18FFCP PHASE2:Hg19::chr10:62677334..62677342,-#_01a93bb6c809bd1f0605d767059bd6c5p@chr10:62677334..62677342, -
9.46e-18FFCP PHASE1:Hg19::chr4:120546882..120546885,-#_01a93bb6c809bd1f0605d767059bd6c5p@chr4:120546882..120546885, -
1.21e-17FFCP PHASE1:Hg19::chr11:19441234..19441247,+#_9457db834d949280b03b01c9fbdba43cp@chr11:19441234..19441247, +
1.21e-17FFCP PHASE2:Hg19::chr11:19441234..19441247,+#_9457db834d949280b03b01c9fbdba43cp@chr11:19441234..19441247, +
1.51e-17FFCP PHASE2:Hg19::chr15:80800274..80800278,-#_c9f655f90e48674e69eb59559da600d6p@chr15:80800274..80800278, -
1.51e-17FFCP PHASE1:Hg19::chr15:80800274..80800278,-#_c9f655f90e48674e69eb59559da600d6p@chr15:80800274..80800278, -
2.0e-17FFCP PHASE1:Hg19::chr1:31842256..31842273,+#_e62df3992ff352ffc55293f58c6cb199p@chr1:31842256..31842273, +
2.0e-17FFCP PHASE2:Hg19::chr1:31842256..31842273,+#_e62df3992ff352ffc55293f58c6cb199p@chr1:31842256..31842273, +
2.07e-17FFCP PHASE1:Hg19::chr18:77557948..77557968,+#_1aa6046722d39ea76934525660be1b91p@chr18:77557948..77557968, +
2.07e-17FFCP PHASE2:Hg19::chr18:77557948..77557968,+#_1aa6046722d39ea76934525660be1b91p@chr18:77557948..77557968, +
3.48e-17FFCP PHASE2:Hg19::chr4:1165106..1165131,-#_3ec209b4d4de47f7d48fe5c2a36a8227p15@SPON2
3.48e-17FFCP PHASE1:Hg19::chr4:1165106..1165131,-#_3ec209b4d4de47f7d48fe5c2a36a8227p15@SPON2
4.46e-17FFCP PHASE2:Hg19::chr10:101292731..101292741,+#_80acf5b03be35ed54a081c96b3d72548p2@NKX2-3
4.46e-17FFCP PHASE1:Hg19::chr10:101292731..101292741,+#_80acf5b03be35ed54a081c96b3d72548p2@NKX2-3
5.3e-17FFCP PHASE2:Hg19::chr7:136759451..136759469,+#_5f207a711b465a5aa249922a6f9a29f7p@chr7:136759451..136759469, +
5.3e-17FFCP PHASE1:Hg19::chr7:136759451..136759469,+#_5f207a711b465a5aa249922a6f9a29f7p@chr7:136759451..136759469, +
8.36e-17FFCP PHASE1:Hg19::chr1:155225028..155225037,-#_7f6510c4898e72f36a6895036f23dc99p7@FAM189B
8.36e-17FFCP PHASE2:Hg19::chr1:155225028..155225037,-#_7f6510c4898e72f36a6895036f23dc99p7@FAM189B
1.05e-16FFCP PHASE2:Hg19::chr8:120079478..120079499,+#_2f848666fa6ca1edecc733b04345a6d1p1@COLEC10
1.05e-16FFCP PHASE1:Hg19::chr8:120079478..120079499,+#_2f848666fa6ca1edecc733b04345a6d1p1@COLEC10
1.88e-16FFCP PHASE2:Hg19::chr4:151503507..151503518,+#_15aa15eedddba98d0aff17f1c0fcaa98p6@MAB21L2
1.88e-16FFCP PHASE1:Hg19::chr4:151503507..151503518,+#_15aa15eedddba98d0aff17f1c0fcaa98p6@MAB21L2
2.92e-16FFCP PHASE2:Hg19::chr10:101292684..101292706,+#_fb8f2f5e637a04b4c576dbf1c6eec951p1@NKX2-3
2.92e-16FFCP PHASE1:Hg19::chr10:101292684..101292706,+#_fb8f2f5e637a04b4c576dbf1c6eec951p1@NKX2-3
4.41e-16FFCP PHASE1:Hg19::chr1:21766691..21766715,+#_6c35915496f05d9e2fabea563c699c09p3@NBPF3
4.41e-16FFCP PHASE2:Hg19::chr1:21766691..21766715,+#_6c35915496f05d9e2fabea563c699c09p3@NBPF3