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Difference between revisions of "CL:0002572"

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Line 13: Line 13:
 
|located_in=
 
|located_in=
 
|name=vertebral mesenchymal stem cell
 
|name=vertebral mesenchymal stem cell
|namespace=cell
+
|namespace=FANTOM
 
|obo_creation_date=2011-03-01T10:40:27Z
 
|obo_creation_date=2011-03-01T10:40:27Z
 
|part_of=UBERON:0002412
 
|part_of=UBERON:0002412

Latest revision as of 07:44, 12 September 2014

Name:vertebral mesenchymal stem cell
Namespace:FANTOM
Definition:"A mesenchymal stem cell of the vertebrae." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-01T10:40:27Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000134(mesenchymal cell),CL:0001035(bone cell)
part_of:UBERON:0002412(vertebra)



Children


derives from:FF:0000093 (human vertebral mesenchymal stem cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11219-116B4 (Mesenchymal Stem Cells - Vertebral, donor1)

Mouse (Mus musculus)

  • 11219-116B4 (Mesenchymal Stem Cells - Vertebral, donor1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002572 (vertebral mesenchymal stem cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results for this cluster