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CL:0002597: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=smooth muscle cell of bladder
|name=smooth muscle cell of bladder
|namespace=cell
|namespace=FANTOM
|obo_creation_date=2011-03-06T05:43:24Z
|obo_creation_date=2011-03-06T05:43:24Z
|part_of=UBERON:0001255
|part_of=UBERON:0001255

Latest revision as of 16:45, 12 September 2014

Name:smooth muscle cell of bladder
Namespace:FANTOM
Definition:"A smooth muscle cell of the bladder." [GC:tfm]
Xrefs:
links:
KUPO:0001122
Created by:tmeehan
Creation date:2011-03-06T05:43:24Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000192(smooth muscle cell),CL:1001319(bladder cell)
part_of:UBERON:0001255(urinary bladder)



Children


derives from:FF:0000178 (human smooth muscle cell of bladder sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002597 (smooth muscle cell of bladder), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results for this cluster