Personal tools

Difference between revisions of "DOID:1287"

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{DOID |id=DOID:1287 |name=cardiovascular system disease |namespace= |def="A disease of anatomical entity which occurs in the blood, heart, blood vessels or the lymphatic ...")
 
Line 2: Line 2:
 
|id=DOID:1287
 
|id=DOID:1287
 
|name=cardiovascular system disease
 
|name=cardiovascular system disease
|namespace=
+
|namespace=disease_ontology
 
|def="A disease of anatomical entity which occurs in the blood, heart, blood vessels or the lymphatic system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells or lymph to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis." [url:http\://en.wikipedia.org/wiki/Circulatory_system]
 
|def="A disease of anatomical entity which occurs in the blood, heart, blood vessels or the lymphatic system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells or lymph to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis." [url:http\://en.wikipedia.org/wiki/Circulatory_system]
|xref=
+
|xref=ICD9CM:429.2;;MSH:D002318;;NCI:C2931;;SNOMEDCT_2010_1_31:105980002;;SNOMEDCT_2010_1_31:155263000;;SNOMEDCT_2010_1_31:194707003;;SNOMEDCT_2010_1_31:195139006;;SNOMEDCT_2010_1_31:195594006;;SNOMEDCT_2010_1_31:266275004;;SNOMEDCT_2010_1_31:266336005;;SNOMEDCT_2010_1_31:49601007;;UMLS_CUI:C0007222
 
|is_a=DOID:7
 
|is_a=DOID:7
 
|synonym="cardiovascular system disease" EXACT [];;"disease of subdivision of hemolymphoid system" EXACT []
 
|synonym="cardiovascular system disease" EXACT [];;"disease of subdivision of hemolymphoid system" EXACT []
Line 20: Line 20:
 
|located_in=
 
|located_in=
 
|part_of=
 
|part_of=
 +
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
 +
|is_obsolete=
 +
|preceded_by=
 
}}
 
}}

Revision as of 04:59, 11 June 2012

Name:cardiovascular system disease
Namespace:disease_ontology
Definition:"A disease of anatomical entity which occurs in the blood, heart, blood vessels or the lymphatic system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells or lymph to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis." [url:http\://en.wikipedia.org/wiki/Circulatory_system]
Xrefs:
links:

ICD9CM:429.2
MSH:D002318
NCI:C2931
SNOMEDCT_2010_1_31:105980002
SNOMEDCT_2010_1_31:155263000
SNOMEDCT_2010_1_31:194707003
SNOMEDCT_2010_1_31:195139006
SNOMEDCT_2010_1_31:195594006
SNOMEDCT_2010_1_31:266275004
SNOMEDCT_2010_1_31:266336005
SNOMEDCT_2010_1_31:49601007

UMLS_CUI:C0007222
Synonyms: "cardiovascular system disease" EXACT []
"disease of subdivision of hemolymphoid system" EXACT []
Alt_id: DOID:73

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:7(disease of anatomical entity)



Children


is a:DOID:114 (heart disease),DOID:178 (vascular disease)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1287 (cardiovascular system disease), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.4e-66FFCP PHASE2:Hg19::chr2:40656537..40656548,-#_25e868a026f71cb60abdb67946e5ecc5p30@SLC8A1
2.4e-66FFCP PHASE1:Hg19::chr2:40656537..40656548,-#_25e868a026f71cb60abdb67946e5ecc5p30@SLC8A1
3.35e-66FFCP PHASE2:Hg19::chr1:202431911..202431922,+#_e7a4e00e0333f2e987f52fa5b6709925p12@PPP1R12B
3.35e-66FFCP PHASE1:Hg19::chr1:202431836..202431849,+#_e7a4e00e0333f2e987f52fa5b6709925p18@PPP1R12B
3.35e-66FFCP PHASE2:Hg19::chr1:202431836..202431849,+#_e7a4e00e0333f2e987f52fa5b6709925p18@PPP1R12B
3.35e-66FFCP PHASE1:Hg19::chr1:202431911..202431922,+#_e7a4e00e0333f2e987f52fa5b6709925p12@PPP1R12B
4.67e-66FFCP PHASE1:Hg19::chr14:23863078..23863082,+#_9eb2879bd34d169ef9cfa54899411806p@chr14:23863078..23863082, +
4.67e-66FFCP PHASE2:Hg19::chr14:23863067..23863074,+#_9eb2879bd34d169ef9cfa54899411806p@chr14:23863067..23863074, +
4.67e-66FFCP PHASE2:Hg19::chr14:23863078..23863082,+#_9eb2879bd34d169ef9cfa54899411806p@chr14:23863078..23863082, +
4.67e-66FFCP PHASE1:Hg19::chr14:23863067..23863074,+#_9eb2879bd34d169ef9cfa54899411806p@chr14:23863067..23863074, +
3.1e-50FFCP PHASE2:Hg19::chr8:12898422..12898427,-#_0ae8445b1eeedf638ade9fbb384534efp@chr8:12898422..12898427, -
3.1e-50FFCP PHASE1:Hg19::chr8:22559267..22559271,-#_0ae8445b1eeedf638ade9fbb384534efp@chr8:22559267..22559271, -
3.1e-50FFCP PHASE1:Hg19::chr4:26277080..26277081,-#_0ae8445b1eeedf638ade9fbb384534efp@chr4:26277080..26277081, -
3.1e-50FFCP PHASE1:Hg19::chr1:159267075..159267096,+#_0ae8445b1eeedf638ade9fbb384534efp@chr1:159267075..159267096, +
3.1e-50FFCP PHASE1:Hg19::chr12:101114061..101114068,+#_0ae8445b1eeedf638ade9fbb384534efp@chr12:101114061..101114068, +
3.1e-50FFCP PHASE2:Hg19::chr22:33206569..33206577,+#_0ae8445b1eeedf638ade9fbb384534efp@chr22:33206569..33206577, +
3.1e-50FFCP PHASE1:Hg19::chr15:35086267..35086272,-#_0ae8445b1eeedf638ade9fbb384534efp@chr15:35086267..35086272, -
3.1e-50FFCP PHASE2:Hg19::chr11:12017002..12017006,-#_0ae8445b1eeedf638ade9fbb384534efp@chr11:12017002..12017006, -
3.1e-50FFCP PHASE2:Hg19::chr1:210573062..210573064,-#_0ae8445b1eeedf638ade9fbb384534efp@chr1:210573062..210573064, -
3.1e-50FFCP PHASE1:Hg19::chr22:33206603..33206608,+#_0ae8445b1eeedf638ade9fbb384534efp@chr22:33206603..33206608, +
3.1e-50FFCP PHASE1:Hg19::chr3:184113225..184113231,-#_0ae8445b1eeedf638ade9fbb384534efp@chr3:184113225..184113231, -
3.1e-50FFCP PHASE2:Hg19::chr14:100485707..100485728,-#_0ae8445b1eeedf638ade9fbb384534efp@chr14:100485707..100485728, -
3.1e-50FFCP PHASE2:Hg19::chr15:96539848..96539851,-#_0ae8445b1eeedf638ade9fbb384534efp@chr15:96539848..96539851, -
3.1e-50FFCP PHASE2:Hg19::chr12:54430774..54430776,+#_0ae8445b1eeedf638ade9fbb384534efp@chr12:54430774..54430776, +
3.1e-50FFCP PHASE2:Hg19::chr18:56320706..56320709,+#_0ae8445b1eeedf638ade9fbb384534efp@chr18:56320706..56320709, +
3.1e-50FFCP PHASE1:Hg19::chr22:25075039..25075064,+#_0ae8445b1eeedf638ade9fbb384534efp@chr22:25075039..25075064, +
3.1e-50FFCP PHASE1:Hg19::chr12:129886232..129886236,+#_0ae8445b1eeedf638ade9fbb384534efp@chr12:129886232..129886236, +
3.1e-50FFCP PHASE2:Hg19::chr20:59009589..59009592,+#_0ae8445b1eeedf638ade9fbb384534efp@chr20:59009589..59009592, +
3.1e-50FFCP PHASE1:Hg19::chrX:71093307..71093345,-#_0ae8445b1eeedf638ade9fbb384534efp@chrX:71093307..71093345, -
3.1e-50FFCP PHASE1:Hg19::chr9:124632999..124633011,-#_0ae8445b1eeedf638ade9fbb384534efp@chr9:124632999..124633011, -
3.1e-50FFCP PHASE2:Hg19::chr4:26277080..26277081,-#_0ae8445b1eeedf638ade9fbb384534efp@chr4:26277080..26277081, -
3.1e-50FFCP PHASE1:Hg19::chr2:173750319..173750340,-#_0ae8445b1eeedf638ade9fbb384534efp@chr2:173750319..173750340, -
3.1e-50FFCP PHASE2:Hg19::chr8:22559267..22559271,-#_0ae8445b1eeedf638ade9fbb384534efp@chr8:22559267..22559271, -
3.1e-50FFCP PHASE2:Hg19::chr1:159267075..159267096,+#_0ae8445b1eeedf638ade9fbb384534efp@chr1:159267075..159267096, +
3.1e-50FFCP PHASE2:Hg19::chr13:98832731..98832745,+#_0ae8445b1eeedf638ade9fbb384534efp@chr13:98832731..98832745, +
3.1e-50FFCP PHASE1:Hg19::chr14:100485632..100485641,-#_0ae8445b1eeedf638ade9fbb384534efp@chr14:100485632..100485641, -
3.1e-50FFCP PHASE1:Hg19::chr12:54430774..54430776,+#_0ae8445b1eeedf638ade9fbb384534efp@chr12:54430774..54430776, +
3.1e-50FFCP PHASE2:Hg19::chr22:33206603..33206608,+#_0ae8445b1eeedf638ade9fbb384534efp@chr22:33206603..33206608, +
3.1e-50FFCP PHASE2:Hg19::chr3:184113225..184113231,-#_0ae8445b1eeedf638ade9fbb384534efp@chr3:184113225..184113231, -
3.1e-50FFCP PHASE1:Hg19::chr8:12999595..12999600,+#_0ae8445b1eeedf638ade9fbb384534efp@chr8:12999595..12999600, +
3.1e-50FFCP PHASE2:Hg19::chr9:124632999..124633011,-#_0ae8445b1eeedf638ade9fbb384534efp@chr9:124632999..124633011, -
3.1e-50FFCP PHASE2:Hg19::chr22:25075039..25075064,+#_0ae8445b1eeedf638ade9fbb384534efp@chr22:25075039..25075064, +
3.1e-50FFCP PHASE1:Hg19::chr4:74508559..74508597,+#_0ae8445b1eeedf638ade9fbb384534efp@chr4:74508559..74508597, +
3.1e-50FFCP PHASE2:Hg19::chrX:71093307..71093345,-#_0ae8445b1eeedf638ade9fbb384534efp@chrX:71093307..71093345, -
3.1e-50FFCP PHASE1:Hg19::chr1:229504069..229504072,-#_0ae8445b1eeedf638ade9fbb384534efp@chr1:229504069..229504072, -
3.1e-50FFCP PHASE1:Hg19::chr22:33206615..33206622,+#_0ae8445b1eeedf638ade9fbb384534efp@chr22:33206615..33206622, +
3.1e-50FFCP PHASE2:Hg19::chr12:54430838..54430849,+#_0ae8445b1eeedf638ade9fbb384534efp@chr12:54430838..54430849, +
3.1e-50FFCP PHASE1:Hg19::chr22:25075096..25075120,+#_0ae8445b1eeedf638ade9fbb384534efp@chr22:25075096..25075120, +
3.1e-50FFCP PHASE1:Hg19::chr17:51127122..51127127,-#_0ae8445b1eeedf638ade9fbb384534efp@chr17:51127122..51127127, -
3.1e-50FFCP PHASE1:Hg19::chrX:46811494..46811522,-#_0ae8445b1eeedf638ade9fbb384534efp@chrX:46811494..46811522, -
3.1e-50FFCP PHASE2:Hg19::chr2:173750319..173750340,-#_0ae8445b1eeedf638ade9fbb384534efp@chr2:173750319..173750340, -
3.1e-50FFCP PHASE1:Hg19::chr18:59518164..59518170,-#_0ae8445b1eeedf638ade9fbb384534efp@chr18:59518164..59518170, -
3.1e-50FFCP PHASE1:Hg19::chr3:25449881..25449891,-#_0ae8445b1eeedf638ade9fbb384534efp@chr3:25449881..25449891, -
3.1e-50FFCP PHASE2:Hg19::chr4:74508559..74508597,+#_0ae8445b1eeedf638ade9fbb384534efp@chr4:74508559..74508597, +
3.1e-50FFCP PHASE2:Hg19::chr8:12999595..12999600,+#_0ae8445b1eeedf638ade9fbb384534efp@chr8:12999595..12999600, +
3.1e-50FFCP PHASE1:Hg19::chr14:100485707..100485728,-#_0ae8445b1eeedf638ade9fbb384534efp@chr14:100485707..100485728, -
3.1e-50FFCP PHASE1:Hg19::chr17:56347811..56347816,-#_0ae8445b1eeedf638ade9fbb384534efp@chr17:56347811..56347816, -
3.1e-50FFCP PHASE1:Hg19::chr12:54430838..54430849,+#_0ae8445b1eeedf638ade9fbb384534efp@chr12:54430838..54430849, +
3.1e-50FFCP PHASE2:Hg19::chr14:93336950..93336968,-#_0ae8445b1eeedf638ade9fbb384534efp@chr14:93336950..93336968, -
3.1e-50FFCP PHASE1:Hg19::chr15:96539848..96539851,-#_0ae8445b1eeedf638ade9fbb384534efp@chr15:96539848..96539851, -
3.1e-50FFCP PHASE2:Hg19::chr15:83368645..83368652,-#_0ae8445b1eeedf638ade9fbb384534efp@chr15:83368645..83368652, -
3.1e-50FFCP PHASE2:Hg19::chr1:229504069..229504072,-#_0ae8445b1eeedf638ade9fbb384534efp@chr1:229504069..229504072, -
3.1e-50FFCP PHASE2:Hg19::chr22:33206615..33206622,+#_0ae8445b1eeedf638ade9fbb384534efp@chr22:33206615..33206622, +
3.1e-50FFCP PHASE1:Hg19::chr8:13199276..13199284,+#_0ae8445b1eeedf638ade9fbb384534efp@chr8:13199276..13199284, +
3.1e-50FFCP PHASE2:Hg19::chr17:51127122..51127127,-#_0ae8445b1eeedf638ade9fbb384534efp@chr17:51127122..51127127, -
3.1e-50FFCP PHASE2:Hg19::chr22:25075096..25075120,+#_0ae8445b1eeedf638ade9fbb384534efp@chr22:25075096..25075120, +
3.1e-50FFCP PHASE1:Hg19::chr20:56058118..56058120,-#_0ae8445b1eeedf638ade9fbb384534efp@chr20:56058118..56058120, -
3.1e-50FFCP PHASE2:Hg19::chrX:46811494..46811522,-#_0ae8445b1eeedf638ade9fbb384534efp@chrX:46811494..46811522, -
3.1e-50FFCP PHASE1:Hg19::chr22:33221188..33221202,+#_0ae8445b1eeedf638ade9fbb384534efp@chr22:33221188..33221202, +
3.1e-50FFCP PHASE2:Hg19::chr18:59518164..59518170,-#_0ae8445b1eeedf638ade9fbb384534efp@chr18:59518164..59518170, -
3.1e-50FFCP PHASE1:Hg19::chr4:26276979..26276986,-#_0ae8445b1eeedf638ade9fbb384534efp@chr4:26276979..26276986, -
3.1e-50FFCP PHASE1:Hg19::chr13:98832731..98832745,+#_0ae8445b1eeedf638ade9fbb384534efp@chr13:98832731..98832745, +
3.1e-50FFCP PHASE1:Hg19::chr17:51147371..51147377,+#_0ae8445b1eeedf638ade9fbb384534efp@chr17:51147371..51147377, +
3.1e-50FFCP PHASE1:Hg19::chr20:36776599..36776606,-#_0ae8445b1eeedf638ade9fbb384534efp@chr20:36776599..36776606, -
3.1e-50FFCP PHASE2:Hg19::chr3:25449881..25449891,-#_0ae8445b1eeedf638ade9fbb384534efp@chr3:25449881..25449891, -
3.1e-50FFCP PHASE2:Hg19::chr17:56347811..56347816,-#_0ae8445b1eeedf638ade9fbb384534efp@chr17:56347811..56347816, -
3.1e-50FFCP PHASE1:Hg19::chr9:80847589..80847596,-#_0ae8445b1eeedf638ade9fbb384534efp@chr9:80847589..80847596, -
3.1e-50FFCP PHASE1:Hg19::chr3:106921810..106921817,-#_0ae8445b1eeedf638ade9fbb384534efp@chr3:106921810..106921817, -
3.1e-50FFCP PHASE2:Hg19::chr15:35086267..35086272,-#_0ae8445b1eeedf638ade9fbb384534efp@chr15:35086267..35086272, -
3.1e-50FFCP PHASE2:Hg19::chr8:13199276..13199284,+#_0ae8445b1eeedf638ade9fbb384534efp@chr8:13199276..13199284, +
3.1e-50FFCP PHASE2:Hg19::chr20:56058118..56058120,-#_0ae8445b1eeedf638ade9fbb384534efp@chr20:56058118..56058120, -
3.1e-50FFCP PHASE2:Hg19::chr22:33221188..33221202,+#_0ae8445b1eeedf638ade9fbb384534efp@chr22:33221188..33221202, +
3.1e-50FFCP PHASE1:Hg19::chr9:124116047..124116052,-#_0ae8445b1eeedf638ade9fbb384534efp@chr9:124116047..124116052, -
3.1e-50FFCP PHASE1:Hg19::chr8:13199316..13199325,+#_0ae8445b1eeedf638ade9fbb384534efp@chr8:13199316..13199325, +
3.1e-50FFCP PHASE2:Hg19::chr17:51147371..51147377,+#_0ae8445b1eeedf638ade9fbb384534efp@chr17:51147371..51147377, +
3.1e-50FFCP PHASE2:Hg19::chr20:36776599..36776606,-#_0ae8445b1eeedf638ade9fbb384534efp@chr20:36776599..36776606, -
3.1e-50FFCP PHASE2:Hg19::chr4:26276979..26276986,-#_0ae8445b1eeedf638ade9fbb384534efp@chr4:26276979..26276986, -
3.1e-50FFCP PHASE2:Hg19::chr9:80847589..80847596,-#_0ae8445b1eeedf638ade9fbb384534efp@chr9:80847589..80847596, -
3.1e-50FFCP PHASE2:Hg19::chr3:106921810..106921817,-#_0ae8445b1eeedf638ade9fbb384534efp@chr3:106921810..106921817, -
3.1e-50FFCP PHASE1:Hg19::chr17:34206860..34206865,-#_0ae8445b1eeedf638ade9fbb384534efp@chr17:34206860..34206865, -
3.1e-50FFCP PHASE1:Hg19::chr2:45490454..45490486,-#_0ae8445b1eeedf638ade9fbb384534efp@chr2:45490454..45490486, -
3.1e-50FFCP PHASE1:Hg19::chr19:28913175..28913210,+#_0ae8445b1eeedf638ade9fbb384534efp@chr19:28913175..28913210, +
3.1e-50FFCP PHASE1:Hg19::chr17:11711799..11711827,-#_0ae8445b1eeedf638ade9fbb384534efp@chr17:11711799..11711827, -
3.1e-50FFCP PHASE1:Hg19::chr7:69393144..69393149,-#_0ae8445b1eeedf638ade9fbb384534efp@chr7:69393144..69393149, -
3.1e-50FFCP PHASE1:Hg19::chr11:12017002..12017006,-#_0ae8445b1eeedf638ade9fbb384534efp@chr11:12017002..12017006, -
3.1e-50FFCP PHASE1:Hg19::chr8:12898422..12898427,-#_0ae8445b1eeedf638ade9fbb384534efp@chr8:12898422..12898427, -
3.1e-50FFCP PHASE1:Hg19::chr15:83368645..83368652,-#_0ae8445b1eeedf638ade9fbb384534efp@chr15:83368645..83368652, -
3.1e-50FFCP PHASE2:Hg19::chr9:124116047..124116052,-#_0ae8445b1eeedf638ade9fbb384534efp@chr9:124116047..124116052, -
3.1e-50FFCP PHASE1:Hg19::chr22:33206569..33206577,+#_0ae8445b1eeedf638ade9fbb384534efp@chr22:33206569..33206577, +
3.1e-50FFCP PHASE2:Hg19::chr8:13199316..13199325,+#_0ae8445b1eeedf638ade9fbb384534efp@chr8:13199316..13199325, +