DOID:3905: Difference between revisions
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|located_in= | |located_in= | ||
|name=lung carcinoma | |name=lung carcinoma | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= |
Latest revision as of 16:51, 12 September 2014
Name: | lung carcinoma | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html] | ||
Xrefs: |
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Synonyms: |
"cancer of lung" EXACT [NCI2004_11_17:C4878] "carcinoma OF LUNG" EXACT [MTH:460] "carcinoma of lung" RELATED [] "lung carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006] "lung carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001] | ||
Comments: | OMIM mapping confirmed by DO. [SN]. |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:1324(lung cancer) |
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Children
is a: | DOID:3908 (non-small cell lung carcinoma),DOID:5409 (lung small cell carcinoma) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10509-107D5 (large cell lung carcinoma cell line:IA-LM)
- 10524-107F2
- 10525-107F3
... further results Mouse (Mus musculus)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10509-107D5 (large cell lung carcinoma cell line:IA-LM)
- 10524-107F2
- 10525-107F3
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3905 (lung carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
9.75e-45 | FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:45399245..45399258, + |
9.75e-45 | FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:45399294..45399301, + |
9.75e-45 | FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:125378873..125378876, + |
9.75e-45 | FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:45399533..45399540, + |
9.75e-45 | FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:45405393..45405412, + |
9.75e-45 | FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:45399263..45399274, + |
9.75e-45 | FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:45405332..45405343, + |
9.75e-45 | FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:45399245..45399258, + |
9.75e-45 | FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:45399533..45399540, + |
9.75e-45 | FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:45405393..45405412, + |
9.75e-45 | FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:45399263..45399274, + |
9.75e-45 | FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:45399294..45399301, + |
9.75e-45 | FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:125378873..125378876, + |
9.75e-45 | FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3 | p@chr6:45405332..45405343, + |
4.35e-40 | FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dc | p@chr6:73785930..73785949, - |
4.35e-40 | FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dc | p@chr6:73785930..73785949, - |
2.66e-30 | FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1e | p@chr5:92526866..92526914, - |
2.66e-30 | FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1e | p@chr6:45399724..45399733, + |
2.66e-30 | FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1e | p@chr6:73786620..73786627, + |
2.66e-30 | FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1e | p@chr6:45399422..45399430, + |
2.66e-30 | FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1e | p@chr6:73786593..73786601, + |
2.66e-30 | FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1e | p@chr13:70823810..70823813, + |
2.66e-30 | FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1e | p@chr5:92526866..92526914, - |
2.66e-30 | FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1e | p@chr6:73786620..73786627, + |
2.66e-30 | FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1e | p@chr13:70823810..70823813, + |
2.66e-30 | FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1e | p@chr8:40525350..40525354, - |
2.66e-30 | FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1e | p@chr6:45399724..45399733, + |
2.66e-30 | FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1e | p@chr6:45399422..45399430, + |
2.66e-30 | FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1e | p@chr6:73786593..73786601, + |
2.66e-30 | FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1e | p@chr8:40525350..40525354, - |
3.09e-30 | FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3a | p@chr18:10085554..10085562, + |
3.09e-30 | FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3a | p@chr18:10085554..10085562, + |
3.59e-30 | FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976 | p@chr1:156779602..156779619, - |
3.59e-30 | FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976 | p@chr1:156779602..156779619, - |
7.5e-29 | FFCP PHASE2:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03 | p2@ENST00000457157 |
7.5e-29 | FFCP PHASE1:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03 | p2@ENST00000457157 |
8.14e-26 | FFCP PHASE2:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1ce | p@chr4:89282612..89282616, + |
8.14e-26 | FFCP PHASE1:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1ce | p@chr4:89282612..89282616, + |
3.17e-25 | FFCP PHASE1:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584 | p8@SFTA3 |
3.17e-25 | FFCP PHASE2:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584 | p8@SFTA3 |
2.62e-23 | FFCP PHASE1:Hg19::chr1:168756079..168756087,+#_ff13f51a990286586a726a44f2e602ca | p3@ENST00000420691 |
2.62e-23 | FFCP PHASE1:Hg19::chr18:6928495..6928520,-#_ff13f51a990286586a726a44f2e602ca | p2@LOC400643 |
2.62e-23 | FFCP PHASE1:Hg19::chr10:129703363..129703373,+#_ff13f51a990286586a726a44f2e602ca | p@chr10:129703363..129703373, + |
2.62e-23 | FFCP PHASE2:Hg19::chr4:169849979..169849990,-#_ff13f51a990286586a726a44f2e602ca | p@chr4:169849979..169849990, - |
2.62e-23 | FFCP PHASE2:Hg19::chr17:13574618..13574636,-#_ff13f51a990286586a726a44f2e602ca | p@chr17:13574618..13574636, - |
2.62e-23 | FFCP PHASE1:Hg19::chr6:154858693..154858698,+#_ff13f51a990286586a726a44f2e602ca | p@chr6:154858693..154858698, + |
2.62e-23 | FFCP PHASE1:Hg19::chr12:79756349..79756364,-#_ff13f51a990286586a726a44f2e602ca | p@chr12:79756349..79756364, - |
2.62e-23 | FFCP PHASE2:Hg19::chrX:48056224..48056233,-#_ff13f51a990286586a726a44f2e602ca | p1@SSX5 |
2.62e-23 | FFCP PHASE2:Hg19::chr9:129291797..129291800,-#_ff13f51a990286586a726a44f2e602ca | p@chr9:129291797..129291800, - |
2.62e-23 | FFCP PHASE2:Hg19::chr7:120378742..120378768,-#_ff13f51a990286586a726a44f2e602ca | p@chr7:120378742..120378768, - |
2.62e-23 | FFCP PHASE2:Hg19::chr3:63805044..63805054,+#_ff13f51a990286586a726a44f2e602ca | p1@C3orf49 |
2.62e-23 | FFCP PHASE2:Hg19::chr2:97626013..97626024,+#_ff13f51a990286586a726a44f2e602ca | p@chr2:97626013..97626024, + |
2.62e-23 | FFCP PHASE2:Hg19::chr15:89655929..89655934,+#_ff13f51a990286586a726a44f2e602ca | p@chr15:89655929..89655934, + |
2.62e-23 | FFCP PHASE2:Hg19::chr14:57127818..57127825,+#_ff13f51a990286586a726a44f2e602ca | p@chr14:57127818..57127825, + |
2.62e-23 | FFCP PHASE2:Hg19::chr10:101691056..101691064,-#_ff13f51a990286586a726a44f2e602ca | p13@DNMBP |
2.62e-23 | FFCP PHASE2:Hg19::chr8:57526601..57526612,+#_ff13f51a990286586a726a44f2e602ca | p@chr8:57526601..57526612, + |
2.62e-23 | FFCP PHASE2:Hg19::chr2:103235035..103235044,+#_ff13f51a990286586a726a44f2e602ca | p@chr2:103235035..103235044, + |
2.62e-23 | FFCP PHASE2:Hg19::chr18:39798771..39798780,-#_ff13f51a990286586a726a44f2e602ca | p@chr18:39798771..39798780, - |
2.62e-23 | FFCP PHASE2:Hg19::chr13:76554315..76554319,+#_ff13f51a990286586a726a44f2e602ca | p@chr13:76554315..76554319, + |
2.62e-23 | FFCP PHASE1:Hg19::chr9:226208..226216,-#_ff13f51a990286586a726a44f2e602ca | p@chr9:226208..226216, - |
2.62e-23 | FFCP PHASE1:Hg19::chr8:82275651..82275662,+#_ff13f51a990286586a726a44f2e602ca | p@chr8:82275651..82275662, + |
2.62e-23 | FFCP PHASE1:Hg19::chr14:57127818..57127825,+#_ff13f51a990286586a726a44f2e602ca | p@chr14:57127818..57127825, + |
2.62e-23 | FFCP PHASE1:Hg19::chr13:25269257..25269262,+#_ff13f51a990286586a726a44f2e602ca | p@chr13:25269257..25269262, + |
2.62e-23 | FFCP PHASE2:Hg19::chr8:100549773..100549807,-#_ff13f51a990286586a726a44f2e602ca | p@chr8:100549773..100549807, - |
2.62e-23 | FFCP PHASE2:Hg19::chr20:2779313..2779314,-#_ff13f51a990286586a726a44f2e602ca | p16@CPXM1 |
2.62e-23 | FFCP PHASE2:Hg19::chr16:50553120..50553126,-#_ff13f51a990286586a726a44f2e602ca | p@chr16:50553120..50553126, - |
2.62e-23 | FFCP PHASE1:Hg19::chr7:26590563..26590574,-#_ff13f51a990286586a726a44f2e602ca | p@chr7:26590563..26590574, - |
2.62e-23 | FFCP PHASE2:Hg19::chr9:97856010..97856019,+#_ff13f51a990286586a726a44f2e602ca | p@chr9:97856010..97856019, + |
2.62e-23 | FFCP PHASE2:Hg19::chr8:98015616..98015617,-#_ff13f51a990286586a726a44f2e602ca | p@chr8:98015616..98015617, - |
2.62e-23 | FFCP PHASE2:Hg19::chr3:189838995..189839000,-#_ff13f51a990286586a726a44f2e602ca | p31@LEPREL1 |
2.62e-23 | FFCP PHASE2:Hg19::chr1:188856567..188856573,-#_ff13f51a990286586a726a44f2e602ca | p2@ENST00000414765 |
2.62e-23 | FFCP PHASE2:Hg19::chr14:36536932..36536937,-#_ff13f51a990286586a726a44f2e602ca | p@chr14:36536932..36536937, - |
2.62e-23 | FFCP PHASE1:Hg19::chrX:135761770..135761786,-#_ff13f51a990286586a726a44f2e602ca | p@chrX:135761770..135761786, - |
2.62e-23 | FFCP PHASE2:Hg19::chr2:175412075..175412078,+#_ff13f51a990286586a726a44f2e602ca | p3@uc002uix.1 |
2.62e-23 | FFCP PHASE1:Hg19::chr6:141715304..141715307,+#_ff13f51a990286586a726a44f2e602ca | p@chr6:141715304..141715307, + |
2.62e-23 | FFCP PHASE2:Hg19::chr6:998897..998898,-#_ff13f51a990286586a726a44f2e602ca | p@chr6:998897..998898, - |
2.62e-23 | FFCP PHASE2:Hg19::chr15:62007373..62007374,-#_ff13f51a990286586a726a44f2e602ca | p2@ENST00000559590 |
2.62e-23 | FFCP PHASE1:Hg19::chr1:188874798..188874820,+#_ff13f51a990286586a726a44f2e602ca | p1@ENST00000445072 |
2.62e-23 | FFCP PHASE1:Hg19::chr19:46763326..46763349,+#_ff13f51a990286586a726a44f2e602ca | p@chr19:46763326..46763349, + |
2.62e-23 | FFCP PHASE2:Hg19::chr4:3838289..3838308,-#_ff13f51a990286586a726a44f2e602ca | p@chr4:3838289..3838308, - |
2.62e-23 | FFCP PHASE2:Hg19::chr18:28978481..28978484,-#_ff13f51a990286586a726a44f2e602ca | p@chr18:28978481..28978484, - |
2.62e-23 | FFCP PHASE1:Hg19::chr5:6961030..6961034,+#_ff13f51a990286586a726a44f2e602ca | p@chr5:6961030..6961034, + |
2.62e-23 | FFCP PHASE1:Hg19::chr3:102635409..102635414,-#_ff13f51a990286586a726a44f2e602ca | p@chr3:102635409..102635414, - |
2.62e-23 | FFCP PHASE2:Hg19::chr3:86929211..86929219,+#_ff13f51a990286586a726a44f2e602ca | p@chr3:86929211..86929219, + |
2.62e-23 | FFCP PHASE2:Hg19::chr16:13010571..13010578,+#_ff13f51a990286586a726a44f2e602ca | p@chr16:13010571..13010578, + |
2.62e-23 | FFCP PHASE2:Hg19::chr14:60194267..60194275,-#_ff13f51a990286586a726a44f2e602ca | p20@RTN1 |
2.62e-23 | FFCP PHASE2:Hg19::chr10:129704201..129704232,-#_ff13f51a990286586a726a44f2e602ca | p@chr10:129704201..129704232, - |
2.62e-23 | FFCP PHASE1:Hg19::chr8:116215298..116215305,+#_ff13f51a990286586a726a44f2e602ca | p@chr8:116215298..116215305, + |
2.62e-23 | FFCP PHASE1:Hg19::chr11:1643561..1643566,+#_ff13f51a990286586a726a44f2e602ca | p@chr11:1643561..1643566, + |
2.62e-23 | FFCP PHASE2:Hg19::chr8:97961177..97961185,-#_ff13f51a990286586a726a44f2e602ca | p@chr8:97961177..97961185, - |
2.62e-23 | FFCP PHASE2:Hg19::chr6:39526005..39526014,-#_ff13f51a990286586a726a44f2e602ca | p@chr6:39526005..39526014, - |
2.62e-23 | FFCP PHASE2:Hg19::chr3:150914094..150914095,+#_ff13f51a990286586a726a44f2e602ca | p@chr3:150914094..150914095, + |
2.62e-23 | FFCP PHASE2:Hg19::chr1:181360250..181360259,+#_ff13f51a990286586a726a44f2e602ca | p@chr1:181360250..181360259, + |
2.62e-23 | FFCP PHASE1:Hg19::chr8:98051049..98051058,-#_ff13f51a990286586a726a44f2e602ca | p@chr8:98051049..98051058, - |
2.62e-23 | FFCP PHASE1:Hg19::chr6:129513919..129513922,+#_ff13f51a990286586a726a44f2e602ca | p@chr6:129513919..129513922, + |
2.62e-23 | FFCP PHASE1:Hg19::chr14:60194267..60194275,-#_ff13f51a990286586a726a44f2e602ca | p20@RTN1 |
2.62e-23 | FFCP PHASE2:Hg19::chr5:134915254..134915270,-#_ff13f51a990286586a726a44f2e602ca | p3@CXCL14 |
2.62e-23 | FFCP PHASE2:Hg19::chrX:135761931..135761934,-#_ff13f51a990286586a726a44f2e602ca | p@chrX:135761931..135761934, - |
2.62e-23 | FFCP PHASE1:Hg19::chr2:241625540..241625541,+#_ff13f51a990286586a726a44f2e602ca | p14@ENST00000407635 |
2.62e-23 | FFCP PHASE1:Hg19::chr4:178653531..178653568,+#_ff13f51a990286586a726a44f2e602ca | p@chr4:178653531..178653568, + |