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|name=lung carcinoma
 
|name=lung carcinoma
 
|namespace=disease_ontology
 
|namespace=disease_ontology
|def="A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https\://merck.com/mmpe/sec05/ch062/ch062b.html]
+
|def="A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html]
 
|xref=NCI:C4878;;OMIM:211980;;SNOMEDCT_2010_1_31:154485001;;SNOMEDCT_2010_1_31:187875007;;SNOMEDCT_2010_1_31:269561006;;UMLS_CUI:C0684249
 
|xref=NCI:C4878;;OMIM:211980;;SNOMEDCT_2010_1_31:154485001;;SNOMEDCT_2010_1_31:187875007;;SNOMEDCT_2010_1_31:269561006;;UMLS_CUI:C0684249
 
|is_a=DOID:1324
 
|is_a=DOID:1324
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|obo_creation_date=
 
|obo_creation_date=
 
|subset=
 
|subset=
|adjacent_to=
 
 
|derives_from=
 
|derives_from=
 
|develops_from=
 
|develops_from=

Revision as of 07:32, 26 June 2012

Name:lung carcinoma
Namespace:disease_ontology
Definition:"A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html]
Xrefs:
links:

NCI:C4878
OMIM:211980
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:269561006

UMLS_CUI:C0684249
Synonyms: "cancer of lung" EXACT [NCI2004_11_17:C4878]
"carcinoma OF LUNG" EXACT [MTH:460]
"carcinoma of lung" RELATED []
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3908 (non-small cell lung carcinoma),DOID:5409 (lung small cell carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3905 (lung carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
9.75e-45FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
4.35e-40FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
4.35e-40FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
2.66e-30FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
3.09e-30FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.09e-30FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.59e-30FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
3.59e-30FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
7.5e-29FFCP PHASE1:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
7.5e-29FFCP PHASE2:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
8.14e-26FFCP PHASE1:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
8.14e-26FFCP PHASE2:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
3.17e-25FFCP PHASE2:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
3.17e-25FFCP PHASE1:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
2.62e-23FFCP PHASE2:Hg19::chr3:86701885..86701893,-#_ff13f51a990286586a726a44f2e602cap@chr3:86701885..86701893, -
2.62e-23FFCP PHASE2:Hg19::chr10:115999570..115999575,+#_ff13f51a990286586a726a44f2e602cap9@VWA2
2.62e-23FFCP PHASE1:Hg19::chr13:95133382..95133389,-#_ff13f51a990286586a726a44f2e602cap@chr13:95133382..95133389, -
2.62e-23FFCP PHASE2:Hg19::chr3:115898365..115898379,+#_ff13f51a990286586a726a44f2e602cap@chr3:115898365..115898379, +
2.62e-23FFCP PHASE2:Hg19::chr13:76755731..76755739,+#_ff13f51a990286586a726a44f2e602cap@chr13:76755731..76755739, +
2.62e-23FFCP PHASE2:Hg19::chr20:13085064..13085070,+#_ff13f51a990286586a726a44f2e602cap@chr20:13085064..13085070, +
2.62e-23FFCP PHASE1:Hg19::chr2:234862417..234862434,+#_ff13f51a990286586a726a44f2e602cap6@TRPM8
2.62e-23FFCP PHASE1:Hg19::chr1:168756303..168756308,+#_ff13f51a990286586a726a44f2e602cap1@MGC4473
2.62e-23FFCP PHASE2:Hg19::chr1:168756151..168756165,+#_ff13f51a990286586a726a44f2e602cap2@ENST00000420691
2.62e-23FFCP PHASE2:Hg19::chr8:116215335..116215378,+#_ff13f51a990286586a726a44f2e602cap@chr8:116215335..116215378, +
2.62e-23FFCP PHASE2:Hg19::chr16:50553120..50553126,-#_ff13f51a990286586a726a44f2e602cap@chr16:50553120..50553126, -
2.62e-23FFCP PHASE1:Hg19::chr18:74671119..74671124,+#_ff13f51a990286586a726a44f2e602cap@chr18:74671119..74671124, +
2.62e-23FFCP PHASE1:Hg19::chr8:97965705..97965721,-#_ff13f51a990286586a726a44f2e602cap@chr8:97965705..97965721, -
2.62e-23FFCP PHASE1:Hg19::chr14:89802926..89802934,-#_ff13f51a990286586a726a44f2e602cap@chr14:89802926..89802934, -
2.62e-23FFCP PHASE2:Hg19::chr1:181360920..181360925,+#_ff13f51a990286586a726a44f2e602cap@chr1:181360920..181360925, +
2.62e-23FFCP PHASE1:Hg19::chr2:135170047..135170048,+#_ff13f51a990286586a726a44f2e602cap@chr2:135170047..135170048, +
2.62e-23FFCP PHASE2:Hg19::chr9:97856010..97856019,+#_ff13f51a990286586a726a44f2e602cap@chr9:97856010..97856019, +
2.62e-23FFCP PHASE2:Hg19::chr11:73475071..73475076,-#_ff13f51a990286586a726a44f2e602cap@chr11:73475071..73475076, -
2.62e-23FFCP PHASE1:Hg19::chr8:98066259..98066270,-#_ff13f51a990286586a726a44f2e602cap@chr8:98066259..98066270, -
2.62e-23FFCP PHASE2:Hg19::chr8:98065877..98065881,-#_ff13f51a990286586a726a44f2e602cap@chr8:98065877..98065881, -
2.62e-23FFCP PHASE1:Hg19::chr3:194808375..194808396,+#_ff13f51a990286586a726a44f2e602cap@chr3:194808375..194808396, +
2.62e-23FFCP PHASE1:Hg19::chr16:7428243..7428259,+#_ff13f51a990286586a726a44f2e602cap@chr16:7428243..7428259, +
2.62e-23FFCP PHASE1:Hg19::chr6:140771120..140771128,+#_ff13f51a990286586a726a44f2e602cap@chr6:140771120..140771128, +
2.62e-23FFCP PHASE2:Hg19::chr17:79970753..79970763,+#_ff13f51a990286586a726a44f2e602cap15@ASPSCR1
2.62e-23FFCP PHASE2:Hg19::chr17:13574618..13574636,-#_ff13f51a990286586a726a44f2e602cap@chr17:13574618..13574636, -
2.62e-23FFCP PHASE1:Hg19::chr7:79765099..79765103,+#_ff13f51a990286586a726a44f2e602cap29@GNAI1
2.62e-23FFCP PHASE2:Hg19::chr7:7749088..7749127,+#_ff13f51a990286586a726a44f2e602cap@chr7:7749088..7749127, +
2.62e-23FFCP PHASE1:Hg19::chr7:120378742..120378768,-#_ff13f51a990286586a726a44f2e602cap@chr7:120378742..120378768, -
2.62e-23FFCP PHASE2:Hg19::chrX:48056224..48056233,-#_ff13f51a990286586a726a44f2e602cap1@SSX5
2.62e-23FFCP PHASE2:Hg19::chr15:89655929..89655934,+#_ff13f51a990286586a726a44f2e602cap@chr15:89655929..89655934, +
2.62e-23FFCP PHASE1:Hg19::chr16:13010455..13010466,+#_ff13f51a990286586a726a44f2e602cap@chr16:13010455..13010466, +
2.62e-23FFCP PHASE2:Hg19::chr1:81686906..81686911,+#_ff13f51a990286586a726a44f2e602cap@chr1:81686906..81686911, +
2.62e-23FFCP PHASE1:Hg19::chr2:222160756..222160761,+#_ff13f51a990286586a726a44f2e602cap@chr2:222160756..222160761, +
2.62e-23FFCP PHASE2:Hg19::chr5:6961030..6961034,+#_ff13f51a990286586a726a44f2e602cap@chr5:6961030..6961034, +
2.62e-23FFCP PHASE2:Hg19::chr12:51116443..51116452,+#_ff13f51a990286586a726a44f2e602cap@chr12:51116443..51116452, +
2.62e-23FFCP PHASE1:Hg19::chr4:81460545..81460547,-#_ff13f51a990286586a726a44f2e602cap@chr4:81460545..81460547, -
2.62e-23FFCP PHASE2:Hg19::chr16:13010571..13010578,+#_ff13f51a990286586a726a44f2e602cap@chr16:13010571..13010578, +
2.62e-23FFCP PHASE2:Hg19::chr2:234862409..234862414,+#_ff13f51a990286586a726a44f2e602cap14@TRPM8
2.62e-23FFCP PHASE2:Hg19::chr14:60194446..60194457,-#_ff13f51a990286586a726a44f2e602cap16@RTN1
2.62e-23FFCP PHASE1:Hg19::chr6:39526005..39526014,-#_ff13f51a990286586a726a44f2e602cap@chr6:39526005..39526014, -
2.62e-23FFCP PHASE2:Hg19::chr18:73967160..73967162,-#_ff13f51a990286586a726a44f2e602cap@chr18:73967160..73967162, -
2.62e-23FFCP PHASE2:Hg19::chr8:97964849..97964868,-#_ff13f51a990286586a726a44f2e602cap@chr8:97964849..97964868, -
2.62e-23FFCP PHASE1:Hg19::chr11:41519057..41519065,-#_ff13f51a990286586a726a44f2e602cap@chr11:41519057..41519065, -
2.62e-23FFCP PHASE1:Hg19::chr3:186548894..186548902,+#_ff13f51a990286586a726a44f2e602cap@chr3:186548894..186548902, +
2.62e-23FFCP PHASE2:Hg19::chr6:45398505..45398508,+#_ff13f51a990286586a726a44f2e602cap@chr6:45398505..45398508, +
2.62e-23FFCP PHASE2:Hg19::chr6:129513919..129513922,+#_ff13f51a990286586a726a44f2e602cap@chr6:129513919..129513922, +
2.62e-23FFCP PHASE2:Hg19::chr8:129431377..129431384,-#_ff13f51a990286586a726a44f2e602cap@chr8:129431377..129431384, -
2.62e-23FFCP PHASE1:Hg19::chrX:135764624..135764645,-#_ff13f51a990286586a726a44f2e602cap@chrX:135764624..135764645, -
2.62e-23FFCP PHASE1:Hg19::chr10:129704382..129704389,+#_ff13f51a990286586a726a44f2e602cap@chr10:129704382..129704389, +
2.62e-23FFCP PHASE2:Hg19::chr7:63539651..63539654,+#_ff13f51a990286586a726a44f2e602cap1@ENST00000430271
2.62e-23FFCP PHASE2:Hg19::chr12:84664687..84664694,+#_ff13f51a990286586a726a44f2e602cap4@ENST00000547882
2.62e-23FFCP PHASE1:Hg19::chr6:998897..998898,-#_ff13f51a990286586a726a44f2e602cap@chr6:998897..998898, -
2.62e-23FFCP PHASE1:Hg19::chr4:185426203..185426209,-#_ff13f51a990286586a726a44f2e602cap@chr4:185426203..185426209, -
2.62e-23FFCP PHASE2:Hg19::chr4:178653531..178653568,+#_ff13f51a990286586a726a44f2e602cap@chr4:178653531..178653568, +
2.62e-23FFCP PHASE1:Hg19::chr9:125306070..125306106,+#_ff13f51a990286586a726a44f2e602cap@chr9:125306070..125306106, +
2.62e-23FFCP PHASE2:Hg19::chr15:62007373..62007374,-#_ff13f51a990286586a726a44f2e602cap2@ENST00000559590
2.62e-23FFCP PHASE2:Hg19::chr7:120378721..120378730,-#_ff13f51a990286586a726a44f2e602cap@chr7:120378721..120378730, -
2.62e-23FFCP PHASE1:Hg19::chr8:39970826..39970832,+#_ff13f51a990286586a726a44f2e602cap@chr8:39970826..39970832, +
2.62e-23FFCP PHASE1:Hg19::chr14:57127856..57127863,+#_ff13f51a990286586a726a44f2e602cap@chr14:57127856..57127863, +
2.62e-23FFCP PHASE1:Hg19::chr6:166582133..166582149,-#_ff13f51a990286586a726a44f2e602cap1@T