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DOID:3905

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Name:lung carcinoma
Namespace:disease_ontology
Definition:"A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html]
Xrefs:
links:

NCI:C4878
OMIM:211980
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:269561006

UMLS_CUI:C0684249
Synonyms: "cancer of lung" EXACT [NCI2004_11_17:C4878]
"carcinoma OF LUNG" EXACT [MTH:460]
"carcinoma of lung" RELATED []
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3908 (non-small cell lung carcinoma),DOID:5409 (lung small cell carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3905 (lung carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
9.75e-45FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
4.35e-40FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
4.35e-40FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
2.66e-30FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
3.09e-30FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.09e-30FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.59e-30FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
3.59e-30FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
7.5e-29FFCP PHASE2:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
7.5e-29FFCP PHASE1:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
8.14e-26FFCP PHASE1:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
8.14e-26FFCP PHASE2:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
3.17e-25FFCP PHASE2:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
3.17e-25FFCP PHASE1:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
2.62e-23FFCP PHASE1:Hg19::chr7:111234799..111234807,-#_ff13f51a990286586a726a44f2e602cap@chr7:111234799..111234807, -
2.62e-23FFCP PHASE2:Hg19::chr1:100110851..100110860,+#_ff13f51a990286586a726a44f2e602cap@chr1:100110851..100110860, +
2.62e-23FFCP PHASE2:Hg19::chr15:85564362..85564385,+#_ff13f51a990286586a726a44f2e602cap@chr15:85564362..85564385, +
2.62e-23FFCP PHASE2:Hg19::chr2:208001650..208001675,-#_ff13f51a990286586a726a44f2e602cap@chr2:208001650..208001675, -
2.62e-23FFCP PHASE1:Hg19::chr14:58045800..58045814,-#_ff13f51a990286586a726a44f2e602cap@chr14:58045800..58045814, -
2.62e-23FFCP PHASE1:Hg19::chr14:36966895..36966899,-#_ff13f51a990286586a726a44f2e602cap@chr14:36966895..36966899, -
2.62e-23FFCP PHASE2:Hg19::chr13:76688920..76688924,+#_ff13f51a990286586a726a44f2e602cap@chr13:76688920..76688924, +
2.62e-23FFCP PHASE1:Hg19::chr1:168756079..168756087,+#_ff13f51a990286586a726a44f2e602cap3@ENST00000420691
2.62e-23FFCP PHASE1:Hg19::chr10:129704201..129704232,-#_ff13f51a990286586a726a44f2e602cap@chr10:129704201..129704232, -
2.62e-23FFCP PHASE2:Hg19::chr16:3332452..3332454,+#_ff13f51a990286586a726a44f2e602cap@chr16:3332452..3332454, +
2.62e-23FFCP PHASE1:Hg19::chr18:73967160..73967162,-#_ff13f51a990286586a726a44f2e602cap@chr18:73967160..73967162, -
2.62e-23FFCP PHASE2:Hg19::chr2:23850222..23850227,+#_ff13f51a990286586a726a44f2e602cap@chr2:23850222..23850227, +
2.62e-23FFCP PHASE2:Hg19::chr7:21209872..21209910,+#_ff13f51a990286586a726a44f2e602cap@chr7:21209872..21209910, +
2.62e-23FFCP PHASE1:Hg19::chr8:97962018..97962029,-#_ff13f51a990286586a726a44f2e602cap@chr8:97962018..97962029, -
2.62e-23FFCP PHASE1:Hg19::chr14:88452922..88452929,-#_ff13f51a990286586a726a44f2e602cap@chr14:88452922..88452929, -
2.62e-23FFCP PHASE1:Hg19::chr2:135169581..135169587,+#_ff13f51a990286586a726a44f2e602cap@chr2:135169581..135169587, +
2.62e-23FFCP PHASE1:Hg19::chr12:133040060..133040064,+#_ff13f51a990286586a726a44f2e602cap@chr12:133040060..133040064, +
2.62e-23FFCP PHASE1:Hg19::chr13:76563913..76563916,+#_ff13f51a990286586a726a44f2e602cap@chr13:76563913..76563916, +
2.62e-23FFCP PHASE1:Hg19::chr10:65730100..65730104,-#_ff13f51a990286586a726a44f2e602cap@chr10:65730100..65730104, -
2.62e-23FFCP PHASE2:Hg19::chr2:192805413..192805418,+#_ff13f51a990286586a726a44f2e602cap@chr2:192805413..192805418, +
2.62e-23FFCP PHASE1:Hg19::chr14:57021818..57021822,+#_ff13f51a990286586a726a44f2e602cap@chr14:57021818..57021822, +
2.62e-23FFCP PHASE2:Hg19::chr11:1643561..1643566,+#_ff13f51a990286586a726a44f2e602cap@chr11:1643561..1643566, +
2.62e-23FFCP PHASE2:Hg19::chr18:10085817..10085825,+#_ff13f51a990286586a726a44f2e602cap@chr18:10085817..10085825, +
2.62e-23FFCP PHASE1:Hg19::chr5:28571974..28571978,-#_ff13f51a990286586a726a44f2e602cap@chr5:28571974..28571978, -
2.62e-23FFCP PHASE1:Hg19::chr11:20362300..20362305,+#_ff13f51a990286586a726a44f2e602cap@chr11:20362300..20362305, +
2.62e-23FFCP PHASE1:Hg19::chr2:97626588..97626595,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626588..97626595, -
2.62e-23FFCP PHASE2:Hg19::chr2:97626580..97626585,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626580..97626585, -
2.62e-23FFCP PHASE1:Hg19::chr16:11118533..11118538,+#_ff13f51a990286586a726a44f2e602cap12@CLEC16A
2.62e-23FFCP PHASE1:Hg19::chr2:222127471..222127478,-#_ff13f51a990286586a726a44f2e602cap@chr2:222127471..222127478, -
2.62e-23FFCP PHASE1:Hg19::chr10:121863383..121863387,-#_ff13f51a990286586a726a44f2e602cap@chr10:121863383..121863387, -
2.62e-23FFCP PHASE1:Hg19::chr8:85893922..85893940,+#_ff13f51a990286586a726a44f2e602cap@chr8:85893922..85893940, +
2.62e-23FFCP PHASE2:Hg19::chr14:60194318..60194325,-#_ff13f51a990286586a726a44f2e602cap22@RTN1
2.62e-23FFCP PHASE1:Hg19::chr6:33644021..33644058,+#_ff13f51a990286586a726a44f2e602cap@chr6:33644021..33644058, +
2.62e-23FFCP PHASE1:Hg19::chr6:125378772..125378777,+#_ff13f51a990286586a726a44f2e602cap@chr6:125378772..125378777, +
2.62e-23FFCP PHASE2:Hg19::chr8:97961686..97961696,-#_ff13f51a990286586a726a44f2e602cap@chr8:97961686..97961696, -
2.62e-23FFCP PHASE2:Hg19::chr2:135120480..135120481,+#_ff13f51a990286586a726a44f2e602cap@chr2:135120480..135120481, +
2.62e-23FFCP PHASE2:Hg19::chr6:44681761..44681769,-#_ff13f51a990286586a726a44f2e602cap@chr6:44681761..44681769, -
2.62e-23FFCP PHASE1:Hg19::chr16:66088105..66088108,-#_ff13f51a990286586a726a44f2e602cap@chr16:66088105..66088108, -
2.62e-23FFCP PHASE2:Hg19::chr6:125547084..125547089,+#_ff13f51a990286586a726a44f2e602cap@chr6:125547084..125547089, +
2.62e-23FFCP PHASE1:Hg19::chr1:188874798..188874820,+#_ff13f51a990286586a726a44f2e602cap1@ENST00000445072
2.62e-23FFCP PHASE1:Hg19::chrX:135761853..135761876,-#_ff13f51a990286586a726a44f2e602cap@chrX:135761853..135761876, -
2.62e-23FFCP PHASE2:Hg19::chr16:7354636..7354645,-#_ff13f51a990286586a726a44f2e602cap@chr16:7354636..7354645, -
2.62e-23FFCP PHASE2:Hg19::chr12:84664596..84664600,+#_ff13f51a990286586a726a44f2e602cap@chr12:84664596..84664600, +
2.62e-23FFCP PHASE2:Hg19::chr1:219599419..219599426,-#_ff13f51a990286586a726a44f2e602cap@chr1:219599419..219599426, -
2.62e-23FFCP PHASE1:Hg19::chr6:998859..998863,-#_ff13f51a990286586a726a44f2e602cap@chr6:998859..998863, -
2.62e-23FFCP PHASE1:Hg19::chr6:154858693..154858698,+#_ff13f51a990286586a726a44f2e602cap@chr6:154858693..154858698, +
2.62e-23FFCP PHASE2:Hg19::chr8:38459926..38459928,+#_ff13f51a990286586a726a44f2e602cap@chr8:38459926..38459928, +
2.62e-23FFCP PHASE1:Hg19::chr17:39140393..39140399,-#_ff13f51a990286586a726a44f2e602cap3@KRT40
2.62e-23FFCP PHASE1:Hg19::chr2:97626065..97626084,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626065..97626084, -
2.62e-23FFCP PHASE2:Hg19::chr2:97626013..97626024,+#_ff13f51a990286586a726a44f2e602cap@chr2:97626013..97626024, +
2.62e-23FFCP PHASE1:Hg19::chr7:84651827..84651832,-#_ff13f51a990286586a726a44f2e602cap@chr7:84651827..84651832, -
2.62e-23FFCP PHASE2:Hg19::chr5:28571958..28571968,-#_ff13f51a990286586a726a44f2e602cap@chr5:28571958..28571968, -
2.62e-23FFCP PHASE1:Hg19::chr1:144618112..144618116,+#_ff13f51a990286586a726a44f2e602cap4@NBPF8
2.62e-23FFCP PHASE2:Hg19::chr4:41750020..41750029,-#_ff13f51a990286586a726a44f2e602cap9@PHOX2B
2.62e-23FFCP PHASE2:Hg19::chr15:96959907..96959930,+#_ff13f51a990286586a726a44f2e602cap@chr15:96959907..96959930, +
2.62e-23FFCP PHASE1:Hg19::chr3:86703154..86703166,-#_ff13f51a990286586a726a44f2e602cap@chr3:86703154..86703166, -
2.62e-23FFCP PHASE2:Hg19::chr7:151169194..151169198,-#_ff13f51a990286586a726a44f2e602cap17@RHEB
2.62e-23FFCP PHASE1:Hg19::chr8:73794113..73794122,+#_ff13f51a990286586a726a44f2e602cap@chr8:73794113..73794122, +
2.62e-23FFCP PHASE1:Hg19::chr14:60194070..60194083,-#_ff13f51a990286586a726a44f2e602cap25@RTN1
2.62e-23FFCP PHASE2:Hg19::chr2:103235329..103235342,+#_ff13f51a990286586a726a44f2e602cap@chr2:103235329..103235342, +