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DOID:3905

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Name:lung carcinoma
Namespace:FANTOM
Definition:"A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html]
Xrefs:
links:

NCI:C4878
OMIM:211980
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:269561006

UMLS_CUI:C0684249
Synonyms: "cancer of lung" EXACT [NCI2004_11_17:C4878]
"carcinoma OF LUNG" EXACT [MTH:460]
"carcinoma of lung" RELATED []
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3908 (non-small cell lung carcinoma),DOID:5409 (lung small cell carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3905 (lung carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.75e-45FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
4.35e-40FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
4.35e-40FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
2.66e-30FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
3.09e-30FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.09e-30FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.59e-30FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
3.59e-30FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
7.5e-29FFCP PHASE1:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
7.5e-29FFCP PHASE2:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
8.14e-26FFCP PHASE1:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
8.14e-26FFCP PHASE2:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
3.17e-25FFCP PHASE2:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
3.17e-25FFCP PHASE1:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
2.62e-23FFCP PHASE2:Hg19::chr7:120381610..120381618,+#_ff13f51a990286586a726a44f2e602cap@chr7:120381610..120381618, +
2.62e-23FFCP PHASE2:Hg19::chr11:20538015..20538023,-#_ff13f51a990286586a726a44f2e602cap@chr11:20538015..20538023, -
2.62e-23FFCP PHASE2:Hg19::chr3:78360347..78360353,+#_ff13f51a990286586a726a44f2e602cap@chr3:78360347..78360353, +
2.62e-23FFCP PHASE2:Hg19::chr8:57525544..57525580,+#_ff13f51a990286586a726a44f2e602cap@chr8:57525544..57525580, +
2.62e-23FFCP PHASE1:Hg19::chr3:102635374..102635381,-#_ff13f51a990286586a726a44f2e602cap@chr3:102635374..102635381, -
2.62e-23FFCP PHASE1:Hg19::chr7:95775942..95775990,-#_ff13f51a990286586a726a44f2e602cap@chr7:95775942..95775990, -
2.62e-23FFCP PHASE2:Hg19::chr7:95766200..95766209,-#_ff13f51a990286586a726a44f2e602cap@chr7:95766200..95766209, -
2.62e-23FFCP PHASE1:Hg19::chr7:158237237..158237241,+#_ff13f51a990286586a726a44f2e602cap@chr7:158237237..158237241, +
2.62e-23FFCP PHASE1:Hg19::chr18:6928495..6928520,-#_ff13f51a990286586a726a44f2e602cap2@LOC400643
2.62e-23FFCP PHASE2:Hg19::chr14:60958049..60958051,-#_ff13f51a990286586a726a44f2e602cap@chr14:60958049..60958051, -
2.62e-23FFCP PHASE1:Hg19::chr2:135119636..135119642,+#_ff13f51a990286586a726a44f2e602cap@chr2:135119636..135119642, +
2.62e-23FFCP PHASE1:Hg19::chr15:91143571..91143582,+#_ff13f51a990286586a726a44f2e602cap@chr15:91143571..91143582, +
2.62e-23FFCP PHASE2:Hg19::chr9:95426545..95426559,-#_ff13f51a990286586a726a44f2e602cap@chr9:95426545..95426559, -
2.62e-23FFCP PHASE2:Hg19::chr11:69640133..69640140,+#_ff13f51a990286586a726a44f2e602cap@chr11:69640133..69640140, +
2.62e-23FFCP PHASE2:Hg19::chr4:139019174..139019198,-#_ff13f51a990286586a726a44f2e602cap@chr4:139019174..139019198, -
2.62e-23FFCP PHASE2:Hg19::chr8:98014001..98014041,-#_ff13f51a990286586a726a44f2e602cap@chr8:98014001..98014041, -
2.62e-23FFCP PHASE2:Hg19::chr10:29213480..29213487,-#_ff13f51a990286586a726a44f2e602cap@chr10:29213480..29213487, -
2.62e-23FFCP PHASE2:Hg19::chr14:88452908..88452916,-#_ff13f51a990286586a726a44f2e602cap@chr14:88452908..88452916, -
2.62e-23FFCP PHASE2:Hg19::chr6:45399278..45399287,+#_ff13f51a990286586a726a44f2e602cap@chr6:45399278..45399287, +
2.62e-23FFCP PHASE2:Hg19::chr6:138060034..138060045,-#_ff13f51a990286586a726a44f2e602cap1@ENST00000411615, p1@ENST00000419220
2.62e-23FFCP PHASE1:Hg19::chr13:92571252..92571265,-#_ff13f51a990286586a726a44f2e602cap@chr13:92571252..92571265, -
2.62e-23FFCP PHASE1:Hg19::chr7:68735132..68735135,+#_ff13f51a990286586a726a44f2e602cap@chr7:68735132..68735135, +
2.62e-23FFCP PHASE2:Hg19::chr7:68735078..68735090,+#_ff13f51a990286586a726a44f2e602cap@chr7:68735078..68735090, +
2.62e-23FFCP PHASE2:Hg19::chr5:146890999..146891017,-#_ff13f51a990286586a726a44f2e602cap@chr5:146890999..146891017, -
2.62e-23FFCP PHASE2:Hg19::chr19:7834829..7834834,+#_ff13f51a990286586a726a44f2e602cap@chr19:7834829..7834834, +
2.62e-23FFCP PHASE1:Hg19::chr12:65516484..65516493,-#_ff13f51a990286586a726a44f2e602cap@chr12:65516484..65516493, -
2.62e-23FFCP PHASE2:Hg19::chr9:129234745..129234747,-#_ff13f51a990286586a726a44f2e602cap@chr9:129234745..129234747, -
2.62e-23FFCP PHASE1:Hg19::chr14:36536932..36536937,-#_ff13f51a990286586a726a44f2e602cap@chr14:36536932..36536937, -
2.62e-23FFCP PHASE1:Hg19::chrX:97443927..97443947,+#_ff13f51a990286586a726a44f2e602cap@chrX:97443927..97443947, +
2.62e-23FFCP PHASE2:Hg19::chr2:97626442..97626445,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626442..97626445, -
2.62e-23FFCP PHASE1:Hg19::chr2:220607845..220607848,+#_ff13f51a990286586a726a44f2e602cap@chr2:220607845..220607848, +
2.62e-23FFCP PHASE2:Hg19::chr5:33650078..33650111,-#_ff13f51a990286586a726a44f2e602cap@chr5:33650078..33650111, -
2.62e-23FFCP PHASE1:Hg19::chr16:7411388..7411391,+#_ff13f51a990286586a726a44f2e602cap@chr16:7411388..7411391, +
2.62e-23FFCP PHASE2:Hg19::chr12:40426483..40426524,-#_ff13f51a990286586a726a44f2e602cap@chr12:40426483..40426524, -
2.62e-23FFCP PHASE1:Hg19::chr4:6324309..6324314,-#_ff13f51a990286586a726a44f2e602cap43@PPP2R2C
2.62e-23FFCP PHASE1:Hg19::chr9:17454052..17454060,+#_ff13f51a990286586a726a44f2e602cap@chr9:17454052..17454060, +
2.62e-23FFCP PHASE1:Hg19::chr3:95401565..95401581,-#_ff13f51a990286586a726a44f2e602cap2@ENST00000463799
2.62e-23FFCP PHASE2:Hg19::chr7:158225991..158225999,+#_ff13f51a990286586a726a44f2e602cap@chr7:158225991..158225999, +
2.62e-23FFCP PHASE1:Hg19::chr11:41519057..41519065,-#_ff13f51a990286586a726a44f2e602cap@chr11:41519057..41519065, -
2.62e-23FFCP PHASE2:Hg19::chr14:60194043..60194066,-#_ff13f51a990286586a726a44f2e602cap18@RTN1
2.62e-23FFCP PHASE1:Hg19::chr2:130564567..130564572,-#_ff13f51a990286586a726a44f2e602cap2@LOC100131048
2.62e-23FFCP PHASE1:Hg19::chr15:71685918..71685922,-#_ff13f51a990286586a726a44f2e602cap@chr15:71685918..71685922, -
2.62e-23FFCP PHASE1:Hg19::chr3:150914241..150914244,+#_ff13f51a990286586a726a44f2e602cap@chr3:150914241..150914244, +
2.62e-23FFCP PHASE1:Hg19::chr10:129704382..129704389,+#_ff13f51a990286586a726a44f2e602cap@chr10:129704382..129704389, +
2.62e-23FFCP PHASE2:Hg19::chr14:25326297..25326305,-#_ff13f51a990286586a726a44f2e602cap@chr14:25326297..25326305, -
2.62e-23FFCP PHASE1:Hg19::chr1:188856590..188856595,-#_ff13f51a990286586a726a44f2e602cap4@ENST00000414765
2.62e-23FFCP PHASE1:Hg19::chr13:76554315..76554319,+#_ff13f51a990286586a726a44f2e602cap@chr13:76554315..76554319, +
2.62e-23FFCP PHASE1:Hg19::chr19:46763326..46763349,+#_ff13f51a990286586a726a44f2e602cap@chr19:46763326..46763349, +
2.62e-23FFCP PHASE1:Hg19::chr4:157516018..157516023,+#_ff13f51a990286586a726a44f2e602cap@chr4:157516018..157516023, +
2.62e-23FFCP PHASE2:Hg19::chr1:199134722..199134729,+#_ff13f51a990286586a726a44f2e602cap@chr1:199134722..199134729, +
2.62e-23FFCP PHASE1:Hg19::chr10:65821760..65821780,+#_ff13f51a990286586a726a44f2e602cap@chr10:65821760..65821780, +
2.62e-23FFCP PHASE2:Hg19::chr12:15722105..15722121,+#_ff13f51a990286586a726a44f2e602cap@chr12:15722105..15722121, +
2.62e-23FFCP PHASE2:Hg19::chr4:39301903..39301910,-#_ff13f51a990286586a726a44f2e602cap@chr4:39301903..39301910, -
2.62e-23FFCP PHASE1:Hg19::chr18:37331745..37331763,-#_ff13f51a990286586a726a44f2e602cap@chr18:37331745..37331763, -
2.62e-23FFCP PHASE2:Hg19::chr2:220594730..220594748,+#_ff13f51a990286586a726a44f2e602cap2@ENST00000442416
2.62e-23FFCP PHASE1:Hg19::chr3:86701885..86701893,-#_ff13f51a990286586a726a44f2e602cap@chr3:86701885..86701893, -
2.62e-23FFCP PHASE1:Hg19::chr11:20538015..20538023,-#_ff13f51a990286586a726a44f2e602cap@chr11:20538015..20538023, -
2.62e-23FFCP PHASE2:Hg19::chr14:58415850..58415853,-#_ff13f51a990286586a726a44f2e602cap@chr14:58415850..58415853, -
2.62e-23FFCP PHASE1:Hg19::chr2:103235120..103235130,+#_ff13f51a990286586a726a44f2e602cap@chr2:103235120..103235130, +
2.62e-23FFCP PHASE2:Hg19::chr2:103235035..103235044,+#_ff13f51a990286586a726a44f2e602cap@chr2:103235035..103235044, +

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