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EFO:0001461

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Name:control
Namespace:FANTOM
Definition:{{{def}}}
Xrefs:
links:
{{{xref}}}:[1]
Synonyms: {{{synonym}}}
Comments:{{{comment}}}
Alt_id: {{{alt_id}}}
Subset: {{{subset}}}
Created by:{{{created_by}}}
Creation date:{{{obo_creation_date}}}
Has quality:{{{has_quality}}}


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents
NA

Children


is a:FF:0200003 (iPS differentiation to neuron, control sample),FF:0200006 (myoblast differentiation to myotubes, control sample),FF:0200011 (THP-1 control sample),FF:10101-102D2 (whole body, embryo E17.5, pool1 (internal control)),FF:10101-102D3 (whole body, embryo E17.5, pool1 (internal control)),FF:11966-126D4 (Smooth muscle cells - airway, control, donor1),FF:11967-126D5 (Smooth muscle cells - airway, control, donor2),FF:11968-126D6 (Smooth muscle cells - airway, control, donor3),FF:11969-126D7 (Smooth muscle cells - airway, control, donor4),FF:14339-155G1 (ES-OS25 embryonic stem cells, DMSO control, biol_rep1),FF:14340-155G2 (ES-OS25 embryonic stem cells, DMSO control, biol_rep2),FF:14341-155G3 (ES-OS25 embryonic stem cells, DMSO control, biol_rep3),FF:14345-155G7 (ES-OS25 embryonic stem cells, untreated control, biol_rep1),FF:14346-155G8 (ES-OS25 embryonic stem cells, untreated control, biol_rep2),FF:2990-64E1 (),FF:3139-67G5 (whole body, embryo E17.5, pool1 (internal control))

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with EFO:0001461 (control), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results for this cluster








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