FF:10156-103A3: Difference between revisions

Latest revision as of 12:23, 3 June 2020

Name:	medial temporal gyrus, adult, donor10252
Species:	Human (Homo sapiens)
Library ID:	CNhs12316
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	medial temporal gyrus
dev stage	NA
sex	female
age	76
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Peter Heutink
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005202

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12316		CAGE		DRX008685		DRR009557

Accession ID Hg19

Library id		BAM		CTSS
CNhs12316		DRZ000982		DRZ002367

Accession ID Hg38

Library id		BAM		CTSS
CNhs12316		DRZ012332		DRZ013717

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.377
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	1.062
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.287
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0.106
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.111
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.576
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0562
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.175
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0562
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0.151
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0.262
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0.106
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0471
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.236
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.936
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.0562
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.0562
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0424
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0.101
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0213
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.096
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.731
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.214
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0.377
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0.106
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.591
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.00467
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0.591
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0562
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0766
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.635
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.106
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0.364
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.534
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.522
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0.0562
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.635
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	1.142
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0562
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0.0811
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.228
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.0562
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.675
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.745
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0.128
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0.507
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.0562
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.7
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.0562
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12316

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0456
MA0003.1	MA0003.1	0.24
MA0004.1	MA0004.1	0.384
MA0006.1	MA0006.1	0.253
MA0007.1	MA0007.1	0.322
MA0009.1	MA0009.1	0.196
MA0014.1	MA0014.1	0.639
MA0017.1	MA0017.1	4.89648e-4
MA0018.2	MA0018.2	0.512
MA0019.1	MA0019.1	0.593
MA0024.1	MA0024.1	0.92
MA0025.1	MA0025.1	0.517
MA0027.1	MA0027.1	0.545
MA0028.1	MA0028.1	0.0565
MA0029.1	MA0029.1	0.0371
MA0030.1	MA0030.1	0.605
MA0031.1	MA0031.1	0.999
MA0035.2	MA0035.2	0.00737
MA0038.1	MA0038.1	0.45
MA0039.2	MA0039.2	0.139
MA0040.1	MA0040.1	0.657
MA0041.1	MA0041.1	0.398
MA0042.1	MA0042.1	0.93
MA0043.1	MA0043.1	1
MA0046.1	MA0046.1	0.00189
MA0047.2	MA0047.2	0.0598
MA0048.1	MA0048.1	0.149
MA0050.1	MA0050.1	0.0322
MA0051.1	MA0051.1	0.0785
MA0052.1	MA0052.1	0.522
MA0055.1	MA0055.1	0.00122
MA0057.1	MA0057.1	0.851
MA0058.1	MA0058.1	0.311
MA0059.1	MA0059.1	0.0733
MA0060.1	MA0060.1	0.736
MA0061.1	MA0061.1	0.00699
MA0062.2	MA0062.2	0.00307
MA0065.2	MA0065.2	1.39873e-4
MA0066.1	MA0066.1	0.00913
MA0067.1	MA0067.1	0.896
MA0068.1	MA0068.1	0.512
MA0069.1	MA0069.1	0.473
MA0070.1	MA0070.1	0.589
MA0071.1	MA0071.1	0.0118
MA0072.1	MA0072.1	0.241
MA0073.1	MA0073.1	0.436
MA0074.1	MA0074.1	0.227
MA0076.1	MA0076.1	0.104
MA0077.1	MA0077.1	0.156
MA0078.1	MA0078.1	0.88
MA0079.2	MA0079.2	0.738
MA0080.2	MA0080.2	7.78161e-8
MA0081.1	MA0081.1	0.0337
MA0083.1	MA0083.1	0.00922
MA0084.1	MA0084.1	0.704
MA0087.1	MA0087.1	0.868
MA0088.1	MA0088.1	0.236
MA0090.1	MA0090.1	0.369
MA0091.1	MA0091.1	0.53
MA0092.1	MA0092.1	0.27
MA0093.1	MA0093.1	0.382
MA0099.2	MA0099.2	2.93582e-20
MA0100.1	MA0100.1	0.539
MA0101.1	MA0101.1	0.00283
MA0102.2	MA0102.2	0.186
MA0103.1	MA0103.1	0.145
MA0104.2	MA0104.2	0.416
MA0105.1	MA0105.1	0.00179
MA0106.1	MA0106.1	0.0472
MA0107.1	MA0107.1	0.00319
MA0108.2	MA0108.2	0.0928
MA0111.1	MA0111.1	0.606
MA0112.2	MA0112.2	0.00104
MA0113.1	MA0113.1	0.534
MA0114.1	MA0114.1	9.63936e-4
MA0115.1	MA0115.1	0.321
MA0116.1	MA0116.1	0.00864
MA0117.1	MA0117.1	0.852
MA0119.1	MA0119.1	0.12
MA0122.1	MA0122.1	0.581
MA0124.1	MA0124.1	0.671
MA0125.1	MA0125.1	0.484
MA0131.1	MA0131.1	0.996
MA0135.1	MA0135.1	0.158
MA0136.1	MA0136.1	7.06887e-12
MA0137.2	MA0137.2	0.86
MA0138.2	MA0138.2	0.467
MA0139.1	MA0139.1	0.424
MA0140.1	MA0140.1	0.00122
MA0141.1	MA0141.1	0.00155
MA0142.1	MA0142.1	0.762
MA0143.1	MA0143.1	0.584
MA0144.1	MA0144.1	0.428
MA0145.1	MA0145.1	0.155
MA0146.1	MA0146.1	0.0144
MA0147.1	MA0147.1	0.309
MA0148.1	MA0148.1	0.0823
MA0149.1	MA0149.1	0.0245
MA0150.1	MA0150.1	2.26098e-4
MA0152.1	MA0152.1	0.478
MA0153.1	MA0153.1	0.084
MA0154.1	MA0154.1	0.0501
MA0155.1	MA0155.1	0.48
MA0156.1	MA0156.1	4.89123e-8
MA0157.1	MA0157.1	0.658
MA0159.1	MA0159.1	0.00402
MA0160.1	MA0160.1	0.00821
MA0162.1	MA0162.1	0.102
MA0163.1	MA0163.1	2.25812e-5
MA0164.1	MA0164.1	0.767
MA0258.1	MA0258.1	0.00941
MA0259.1	MA0259.1	0.828

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12316

Novel motif	Logo	P-value
1	1	0.0728
10	10	0.0602
100	100	0.366
101	101	0.469
102	102	0.975
103	103	0.139
104	104	0.174
105	105	0.157
106	106	0.0464
107	107	0.0983
108	108	0.955
109	109	0.00154
11	11	0.0126
110	110	0.0516
111	111	0.225
112	112	0.376
113	113	0.497
114	114	0.186
115	115	0.987
116	116	0.125
117	117	0.0123
118	118	0.142
119	119	0.213
12	12	0.479
120	120	0.241
121	121	0.26
122	122	0.837
123	123	0.58
124	124	0.147
125	125	0.192
126	126	0.0238
127	127	0.579
128	128	0.145
129	129	0.564
13	13	0.00113
130	130	0.147
131	131	0.0439
132	132	0.558
133	133	0.0843
134	134	0.583
135	135	0.188
136	136	6.04582e-4
137	137	0.861
138	138	0.983
139	139	0.115
14	14	0.829
140	140	0.702
141	141	0.579
142	142	0.906
143	143	0.107
144	144	0.903
145	145	0.137
146	146	0.541
147	147	0.832
148	148	0.395
149	149	0.243
15	15	0.093
150	150	0.149
151	151	0.657
152	152	0.0747
153	153	0.85
154	154	0.458
155	155	0.947
156	156	0.466
157	157	0.454
158	158	0.137
159	159	0.0153
16	16	0.0414
160	160	0.217
161	161	0.205
162	162	0.66
163	163	0.641
164	164	0.0467
165	165	0.045
166	166	0.898
167	167	0.993
168	168	0.577
169	169	0.0117
17	17	0.119
18	18	0.115
19	19	0.183
2	2	0.808
20	20	0.143
21	21	0.058
22	22	0.192
23	23	0.404
24	24	0.0224
25	25	0.475
26	26	3.8457e-4
27	27	0.74
28	28	0.644
29	29	0.00773
3	3	0.0523
30	30	0.931
31	31	0.861
32	32	0.0245
33	33	0.0488
34	34	0.598
35	35	0.636
36	36	0.194
37	37	0.0323
38	38	0.358
39	39	0.22
4	4	0.802
40	40	0.0272
41	41	0.312
42	42	0.259
43	43	0.13
44	44	0.156
45	45	0.633
46	46	0.0889
47	47	0.0684
48	48	0.0545
49	49	0.252
5	5	0.786
50	50	0.34
51	51	0.426
52	52	0.476
53	53	0.81
54	54	0.391
55	55	0.528
56	56	0.461
57	57	0.363
58	58	0.31
59	59	0.0723
6	6	0.904
60	60	0.0663
61	61	0.0735
62	62	0.187
63	63	0.212
64	64	0.207
65	65	0.256
66	66	0.164
67	67	0.357
68	68	0.21
69	69	0.371
7	7	0.0547
70	70	0.0558
71	71	0.0108
72	72	0.402
73	73	0.0231
74	74	0.941
75	75	0.0404
76	76	0.477
77	77	0.129
78	78	0.00223
79	79	0.394
8	8	0.0641
80	80	0.457
81	81	0.662
82	82	0.593
83	83	0.0485
84	84	0.593
85	85	0.244
86	86	0.221
87	87	5.25242e-5
88	88	0.796
89	89	0.356
9	9	0.337
90	90	0.086
91	91	0.863
92	92	0.532
93	93	0.94
94	94	0.202
95	95	0.00843
96	96	0.794
97	97	0.773
98	98	0.302
99	99	0.546

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12316

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010156 human medial temporal gyrus donor sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001871 (temporal lobe)
0000200 (gyrus)
0002771 (middle temporal gyrus)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010156 (human medial temporal gyrus donor sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000073,UBERON:0000153,UBERON:0000200,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0000956,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001869,UBERON:0001871,UBERON:0001890,UBERON:0001893,UBERON:0001950,UBERON:0002050,UBERON:0002346,UBERON:0002532,UBERON:0002616,UBERON:0002619,UBERON:0002771,UBERON:0002780,UBERON:0002791,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
+|DRA_sample_Accession=CAGE@SAMD00005202
+|accession_numbers=CAGE;DRX008685;DRR009557;DRZ000982;DRZ002367;DRZ012332;DRZ013717
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001871,UBERON:0000200,UBERON:0002771,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010156
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.46!290.20!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.34!218.72!OLIG1;;chr22:38380543..38380569,-!p1@SOX10!2.26!181.26!SOX10;;chr9:77112244..77112262,+!p1@RORB!2.17!161.76!RORB;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.08!120.01!PEG3;;chr11:61520075..61520136,+!p1@C11orf9!1.99!196.05!C11orf9;;chr3:181429704..181429722,+!p1@SOX2!1.93!84.89!SOX2;;chr4:81118647..81118666,+!p1@PRDM8!1.92!107.15!PRDM8;;chr17:53342311..53342400,+!p1@HLF!1.88!85.72!HLF;;chr10:64134120..64134183,+!p1@ZNF365!1.82!78.39!ZNF365;;chr8:53322304..53322340,-!p1@ST18!1.81!64.29!ST18;;chr17:37764128..37764258,-!p1@NEUROD2!1.81!63.46!NEUROD2;;chr9:114287433..114287513,+!p1@ZNF483!1.77!143.79!ZNF483;;chr14:29235961..29236008,+!p1@FOXG1!1.77!57.79!FOXG1;;chr11:113930425..113930471,+!p1@ZBTB16!1.75!78.95!ZBTB16;;chr21:34398234..34398250,+!p1@OLIG2!1.73!53.23!OLIG2;;chr2:95963052..95963106,+!p1@KCNIP3!1.71!50.74!KCNIP3;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.70!48.94!SMARCE1;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.69!48.11!POU3F3;;chr19:46801639..46801699,+!p1@HIF3A!1.68!46.59!HIF3A;;chr2:145277882..145277967,-!p3@ZEB2!1.66!76.46!ZEB2;;chr2:162272785..162272836,+!p1@TBR1!1.66!44.52!TBR1;;chr15:80733570..80733659,+!p2@ARNT2!1.66!44.24!ARNT2;;chr12:26277817..26277863,-!p2@BHLHE41!1.65!58.90!BHLHE41;;chr21:34442540..34442560,+!p2@OLIG1!1.62!40.65!OLIG1;;chr16:1031762..1031781,+!p1@SOX8!1.62!40.23!SOX8;;chr19:13135582..13135600,+!p3@NFIX!1.60!38.57!NFIX;;chr2:2334997..2335053,-!p1@MYT1L!1.60!38.57!MYT1L;;chr8:40755333..40755352,-!p1@ZMAT4!1.59!37.88!ZMAT4;;chrX:25034067..25034088,-!p1@ARX!1.58!37.33!ARX;;chr5:88178983..88179012,-!p1@MEF2C!1.57!265.87!MEF2C;;chr10:48355030..48355090,+!p1@ZNF488!1.57!45.76!ZNF488;;chr10:134599649..134599653,-!p1@NKX6-2!1.56!35.67!NKX6-2;;chr12:106976678..106976708,+!p2@RFX4!1.56!35.39!RFX4;;chr8:53322347..53322378,-!p2@ST18!1.56!35.26!ST18;;chr2:166326200..166326216,+!p1@CSRNP3!1.53!47.01!CSRNP3;;chr15:80735246..80735321,+!p3@ARNT2!1.53!33.18!ARNT2;;chr19:13135386..13135435,+!p4@NFIX!1.53!32.63!NFIX;;chr10:119302232..119302265,+!p1@EMX2!1.51!31.52!EMX2;;chr12:54779511..54779577,-!p5@ZNF385A!1.51!31.52!ZNF385A;;chr22:41763452..41763466,+!p2@TEF!1.50!30.56!TEF;;chr3:181429741..181429767,+!p2@SOX2!1.49!29.86!SOX2;;chr11:31832862..31832884,-!p2@PAX6!1.49!29.86!PAX6;;chr12:26277956..26277980,-!p1@BHLHE41!1.48!101.21!BHLHE41;;chr4:57547454..57547469,-!p1@HOPX!1.48!29.17!HOPX;;chr15:80696703..80696754,+!p1@ARNT2!1.46!37.05!ARNT2;;chr5:92920256..92920282,+!p7@NR2F1!1.46!33.46!NR2F1;;chr2:60781201..60781258,-!p3@BCL11A!1.44!26.82!BCL11A;;chr15:31658288..31658338,+!p4@KLF13!1.43!26.13!KLF13;;chr18:53070846..53070902,-!p6@TCF4!1.42!25.44!TCF4;;chr8:145560111..145560165,-!p2@SCRT1!1.41!24.61!SCRT1;;chr9:126774018..126774055,+!p1@LHX2!1.39!23.78!LHX2;;chr7:31380292..31380351,-!p1@NEUROD6!1.39!23.64!NEUROD6;;chr11:8102846..8102892,+!p1@TUB!1.38!31.80!TUB;;chr3:126076242..126076257,-!p1@KLF15!1.38!28.76!KLF15;;chr14:29236269..29236285,+!p3@FOXG1!1.38!22.81!FOXG1;;chr17:7492684..7492778,-!p2@SOX15!1.37!46.32!SOX15;;chr14:33403881..33403924,+!p1@NPAS3!1.37!22.26!NPAS3;;chr1:214161272..214161322,+!p1@PROX1!1.36!30.83!PROX1;;chr14:29234581..29234601,+!p2@FOXG1!1.35!21.15!FOXG1;;chr12:106976774..106976788,+!p1@RFX4!1.34!20.74!RFX4;;chr16:85932760..85932775,+!p1@IRF8!1.33!20.60!IRF8;;chr8:145560371..145560449,-!p1@SCRT1!1.33!20.46!SCRT1;;chr11:125034640..125034655,+!p1@PKNOX2!1.32!19.77!PKNOX2;;chr1:244219775..244219893,+!p2@ZNF238!1.30!25.72!ZNF238;;chr6:143266185..143266238,-!p2@HIVEP2!1.29!25.44!HIVEP2;;chr9:77112225..77112238,+!p2@RORB!1.29!18.53!RORB;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.29!18.53!ZBED1;;chr17:70117153..70117174,+!p1@SOX9!1.28!181.67!SOX9;;chr4:57522166..57522260,-!p2@HOPX!1.28!20.88!HOPX;;chr19:46800289..46800327,+!p2@HIF3A!1.27!17.70!HIF3A;;chr6:126112039..126112062,+!p8@NCOA7!1.26!20.74!NCOA7;;chr6:28321971..28321995,-!p1@ZNF323!1.25!16.73!ZNF323;;chr6:19837592..19837621,+!p1@ID4!1.22!94.43!ID4;;chr7:63505799..63505904,+!p1@ZNF727!1.22!15.76!ZNF727;;chr14:58798013..58798071,+!p2@ARID4A!1.22!15.76!ARID4A;;chr11:47400078..47400106,-!p1@SPI1!1.22!15.62!SPI1;;chr12:103351444..103351461,+!p1@ASCL1!1.21!15.21!ASCL1;;chr17:38219209..38219230,+!p1@THRA!1.20!191.49!THRA;;chr3:24536253..24536328,-!p1@THRB!1.20!28.20!THRB;;chr9:126773880..126773895,+!p2@LHX2!1.20!14.93!LHX2;;chr1:61548069..61548102,+!p3@NFIA!1.19!35.12!NFIA;;chr12:54785074..54785122,-!p2@ZNF385A!1.19!22.40!ZNF385A;;chr14:33403648..33403710,+!p3@NPAS3!1.19!14.52!NPAS3;;chr5:88179017..88179046,-!p2@MEF2C!1.18!56.41!MEF2C;;chr2:95963120..95963136,+!p2@KCNIP3!1.18!14.10!KCNIP3;;chr12:24715376..24715432,-!p1@SOX5!1.17!17.42!SOX5;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.17!13.83!POU3F3;;chr9:3525867..3525902,-!p3@RFX3!1.16!46.45!RFX3;;chr2:60780607..60780624,-!p2@BCL11A!1.16!41.62!BCL11A;;chr2:200323414..200323455,-!p1@SATB2!1.16!28.62!SATB2;;chr15:31631789..31631811,+!p13@KLF13!1.16!13.41!KLF13;;chr7:73038839..73038862,-!p1@MLXIPL!1.16!13.41!MLXIPL;;chr19:7580549..7580596,+!p3@ZNF358!1.15!13.27!ZNF358;;chr9:126774058..126774081,+!p3@LHX2!1.15!13.13!LHX2;;chr2:162272716..162272753,+!p3@TBR1!1.15!13.13!TBR1;;chr16:51185318..51185348,-!p2@SALL1!1.15!13.00!SALL1;;chr16:67198633..67198671,+!p1@HSF4!1.15!13.00!HSF4;;chr6:15401104..15401166,+!p5@JARID2!1.14!12.86!JARID2;;chr11:113930291..113930339,+!p2@ZBTB16!1.13!20.32!ZBTB16;;chr14:33408072..33408114,+!p2@NPAS3!1.13!14.66!NPAS3;;chr11:113930401..113930422,+!p3@ZBTB16!1.13!12.44!ZBTB16;;chr2:162272889..162272915,+!p2@TBR1!1.13!12.44!TBR1;;chr9:3525910..3525955,-!p4@RFX3!1.12!36.92!RFX3;;chr15:61521417..61521460,-!p2@RORA!1.12!27.38!RORA;;chr2:2328299..2328363,-!p3@MYT1L!1.12!12.31!MYT1L;;chrX:70315688..70315709,+!p1@FOXO4!1.10!27.38!FOXO4;;chr3:141105705..141105770,+!p4@ZBTB38!1.10!14.10!ZBTB38;;chr19:57183114..57183145,-!p1@ZNF835!1.10!13.13!ZNF835;;chr2:166428839..166428859,+!p2@CSRNP3!1.10!11.48!CSRNP3;;chr16:67197654..67197716,+!p3@HSF4!1.10!11.48!HSF4;;chr5:71803177..71803255,-!p1@ZNF366!1.10!11.48!ZNF366;;chr8:30890810..30890880,-!p1@PURG!1.10!11.48!PURG;;chr7:64023410..64023428,-!p2@ZNF680!1.09!18.11!ZNF680;;chr8:93074803..93074845,-!p1@RUNX1T1!1.09!11.34!RUNX1T1;;chr19:57352109..57352153,-!p2@ZIM2!1.09!11.34!ZIM2;;chr11:125034605..125034636,+!p2@PKNOX2!1.09!11.20!PKNOX2;;chr13:46549911..46549956,-!p3@ZC3H13!1.08!15.90!ZC3H13;;chr20:51588873..51588953,+!p1@TSHZ2!1.08!14.52!TSHZ2;;chr19:38720294..38720348,-!p1@DPF1!1.08!13.83!DPF1;;chrX:85969626..85969664,+!p1@DACH2!1.08!11.06!DACH2;;chr19:38085768..38085821,+!p1@ZNF540!1.07!16.18!ZNF540;;chr3:126076264..126076305,-!p2@KLF15!1.07!14.93!KLF15;;chr21:39870339..39870443,-!p1@ERG!1.07!10.78!ERG;;chr14:73360799..73360817,-!p1@DPF3!1.06!36.78!DPF3;;chr18:52989031..52989079,-!p2@TCF4!1.06!24.89!TCF4;;chrX:118739835..118739862,-!p1@NKRF!1.06!11.48!NKRF;;chr12:24102576..24102623,-!p2@SOX5!1.06!10.37!SOX5;;chr3:24536332..24536358,-!p2@THRB!1.06!10.37!THRB;;chr19:30863271..30863338,+!p1@ZNF536!1.06!10.37!ZNF536;;chr17:38256822..38256851,-!p1@NR1D1!1.05!80.74!NR1D1;;chr16:79634624..79634642,-!p1@MAF!1.05!40.23!MAF;;chr5:178368186..178368238,+!p1@ZNF454!1.05!18.53!ZNF454;;chr2:214016314..214016343,-!p2@IKZF2!1.05!17.14!IKZF2;;chr16:67198683..67198698,+!p2@HSF4!1.05!10.23!HSF4;;chr2:180726291..180726311,-!p1@ZNF385B!1.05!10.09!ZNF385B;;chr1:40105299..40105326,-!p1@HEYL!1.04!9.95!HEYL;;chr21:34442584..34442587,+!p3@OLIG1!1.04!9.95!OLIG1;;chr1:151032860..151032918,+!p1@MLLT11!1.03!117.10!MLLT11;;chr2:113057415..113057477,+!p3@ZC3H6!1.02!12.58!ZC3H6;;chr16:86544113..86544145,+!p1@FOXF1!1.02!11.89!FOXF1;;chr3:18466660..18466676,-!p5@SATB1!1.02!11.20!SATB1;;chr2:2330039..2330072,-!p6@MYT1L!1.02!9.40!MYT1L;;chr1:8585945..8586056,-!p3@RERE!1.01!31.80!RERE;;chr5:88179518..88179569,-!p5@MEF2C!1.01!12.17!MEF2C;;chr16:51185172..51185197,-!p1@SALL1!1.01!9.26!SALL1;;chr13:100634031..100634045,+!p1@ZIC2!1.01!9.26!ZIC2;;chr11:31832807..31832823,-!p4@PAX6!1.01!9.13!PAX6;;chr12:103352277..103352324,+!p2@ASCL1!1.01!9.13!ASCL1;;chr20:51589133..51589159,+!p2@TSHZ2!1.01!9.13!TSHZ2;;chr3:18466787..18466839,-!p1@SATB1!1.00!40.79!SATB1;;chr12:125003087..125003141,-!p4@NCOR2!0.99!11.34!NCOR2;;chr11:31832658..31832681,-!p1@PAX6!0.99!8.85!PAX6;;chr13:100623375..100623425,-!p1@ZIC5!0.99!8.85!ZIC5;;chr6:126112074..126112144,+!p1@NCOA7!0.98!117.10!NCOA7;;chr16:79634595..79634620,-!p2@MAF!0.98!15.90!MAF;;chr3:141105235..141105307,+!p7@ZBTB38!0.98!8.57!ZBTB38;;chr10:38265517..38265591,-!p1@ZNF25!0.97!33.18!ZNF25;;chr3:114819124..114819200,-!p3@ZBTB20!0.97!19.77!ZBTB20;;chr14:24020938..24020988,-!p1@ZFHX2!0.97!12.03!ZFHX2;;chr11:31839488..31839515,-!p3@PAX6!0.97!8.43!PAX6;;chr16:67197776..67197831,+!p4@HSF4!0.97!8.43!HSF4;;chr8:10588010..10588030,-!p1@SOX7!0.97!8.30!SOX7;;chr20:62680984..62680999,-!p1@SOX18!0.96!10.78!SOX18;;chr5:88119715..88119757,-!p11@MEF2C!0.96!8.16!MEF2C;;chr6:28321827..28321856,-!p5@ZNF323!0.96!8.16!ZNF323;;chr7:39125511..39125560,+!p1@POU6F2!0.96!8.16!POU6F2;;chr5:138609489..138609542,+!p8@MATR3!0.96!8.02!MATR3;;chr13:45151434..45151507,-!p3@TSC22D1!0.95!44.80!TSC22D1;;chr19:21512202..21512225,-!p1@ZNF708!0.95!42.17!ZNF708;;chr19:53636125..53636178,-!p1@ZNF415!0.95!23.37!ZNF415;;chr12:26277929..26277955,-!p3@BHLHE41!0.95!11.48!BHLHE41;;chr10:119302182..119302196,+!p6@EMX2!0.95!7.88!EMX2;;chr10:119302268..119302282,+!p4@EMX2!0.95!7.88!EMX2;;chr2:100721281..100721307,-!p5@AFF3!0.95!7.88!AFF3;;chr6:28321909..28321965,-!p3@ZNF323!0.95!7.88!ZNF323;;chr7:28725740..28725778,+!p1@CREB5!0.94!71.20!CREB5;;chr1:8877692..8877732,-!p1@RERE!0.94!63.88!RERE;;chr7:64023441..64023462,-!p1@ZNF680!0.93!61.66!ZNF680;;chr19:21512144..21512191,-!p2@ZNF708!0.93!36.09!ZNF708;;chr3:187463179..187463201,-!p2@BCL6!0.93!31.80!BCL6;;chr15:31618903..31618962,+!p3@KLF13!0.93!21.29!KLF13;;chr8:60031682..60031710,-!p2@TOX!0.93!12.58!TOX;;chr8:22550530..22550609,-!p2@EGR3!0.93!7.60!EGR3;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 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
 |has_quality=
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+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/medial%2520temporal%2520gyrus%252c%2520adult%252c%2520donor10252.CNhs12316.10156-103A3.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/medial%2520temporal%2520gyrus%252c%2520adult%252c%2520donor10252.CNhs12316.10156-103A3.hg38.nobarcode.bam
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 |id=FF:10156-103A3
-|is_a=EFO:0002091;;FF:0000004;;FF:0000210;;FF:0010156
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-|name=middle temporal gyrus, donor10252
+|is_obsolete=
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+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10156
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10156
+|name=medial temporal gyrus, adult, donor10252
 |namespace=FANTOM5
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 |profile_hcage=CNhs12316,LSID913,release011,COMPLETED
-|profile_rnaseq=,,,
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 |rna_box=103
 |rna_catalog_number=
@@ Line 57: / Line 78: @@
 |rna_weight_ug=26.73825
 |sample_age=76
+|sample_category=tissues
 |sample_cell_catalog=NA
 |sample_cell_line=
@@ Line 69: / Line 91: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.28171930002054e-270!GO:0005737;cytoplasm;8.45078110927967e-145!GO:0043226;organelle;7.83054169636982e-104!GO:0043229;intracellular organelle;2.34741786914644e-103!GO:0043227;membrane-bound organelle;5.06229400338799e-96!GO:0043231;intracellular membrane-bound organelle;7.96589803353004e-96!GO:0044444;cytoplasmic part;4.66075145819759e-87!GO:0005515;protein binding;2.59655433108606e-71!GO:0044422;organelle part;6.20036235394816e-62!GO:0044446;intracellular organelle part;6.05651115595703e-61!GO:0032991;macromolecular complex;4.16154394152738e-58!GO:0016043;cellular component organization and biogenesis;4.03787764481749e-47!GO:0003723;RNA binding;3.02993468135593e-37!GO:0033036;macromolecule localization;5.09283454870824e-37!GO:0015031;protein transport;6.78299761764952e-36!GO:0030529;ribonucleoprotein complex;9.28086698054125e-36!GO:0005739;mitochondrion;1.41318954411594e-34!GO:0008104;protein localization;2.54303550941187e-33!GO:0043234;protein complex;2.89691644186297e-33!GO:0044428;nuclear part;6.84170160224516e-33!GO:0045184;establishment of protein localization;2.2092786912347e-32!GO:0043233;organelle lumen;2.28736527762725e-32!GO:0031974;membrane-enclosed lumen;2.28736527762725e-32!GO:0031090;organelle membrane;9.011931258484e-31!GO:0005634;nucleus;9.7127112358099e-30!GO:0046907;intracellular transport;1.88108067704714e-29!GO:0051649;establishment of cellular localization;2.11786424247372e-27!GO:0016071;mRNA metabolic process;3.93977884402259e-27!GO:0044238;primary metabolic process;4.05463655142802e-27!GO:0051641;cellular localization;5.46508181710898e-27!GO:0043170;macromolecule metabolic process;5.74606496563955e-27!GO:0016192;vesicle-mediated transport;1.00831566454107e-26!GO:0044237;cellular metabolic process;1.2133731145748e-25!GO:0044429;mitochondrial part;1.44600849939142e-25!GO:0006396;RNA processing;1.23434398446424e-24!GO:0008380;RNA splicing;5.28614259528047e-24!GO:0031975;envelope;8.23159375756611e-24!GO:0031967;organelle envelope;1.10007232476082e-23!GO:0019538;protein metabolic process;2.85595239512216e-23!GO:0006397;mRNA processing;3.04880783256652e-22!GO:0005829;cytosol;3.22818850105542e-22!GO:0006996;organelle organization and biogenesis;6.85420356414099e-22!GO:0006886;intracellular protein transport;3.6260858769133e-21!GO:0031981;nuclear lumen;1.70116275926554e-20!GO:0044260;cellular macromolecule metabolic process;5.52814725524498e-20!GO:0044267;cellular protein metabolic process;1.44688499933403e-19!GO:0043283;biopolymer metabolic process;1.64826098187899e-19!GO:0006119;oxidative phosphorylation;4.37672639097768e-19!GO:0005740;mitochondrial envelope;3.81112468280979e-18!GO:0000166;nucleotide binding;3.95180918544199e-18!GO:0005794;Golgi apparatus;8.49553295396852e-18!GO:0031966;mitochondrial membrane;8.83593539634859e-18!GO:0031982;vesicle;1.67498324007621e-17!GO:0005840;ribosome;2.85499261538747e-17!GO:0031410;cytoplasmic vesicle;9.75815088040756e-17!GO:0065003;macromolecular complex assembly;1.1989072465478e-16!GO:0019866;organelle inner membrane;1.23762918708614e-16!GO:0005681;spliceosome;2.40661104875435e-16!GO:0031988;membrane-bound vesicle;5.28480700324216e-16!GO:0005743;mitochondrial inner membrane;8.66087038128115e-16!GO:0016023;cytoplasmic membrane-bound vesicle;2.78614920169884e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.52038973841934e-15!GO:0016462;pyrophosphatase activity;4.27383808711726e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;4.27387128883041e-15!GO:0006512;ubiquitin cycle;5.3556355773316e-15!GO:0022607;cellular component assembly;8.15691282124127e-15!GO:0043412;biopolymer modification;1.24284211732648e-14!GO:0044455;mitochondrial membrane part;1.32861878624474e-14!GO:0043687;post-translational protein modification;3.01598648913789e-14!GO:0017111;nucleoside-triphosphatase activity;3.70550623813407e-14!GO:0006412;translation;3.97483504861541e-14!GO:0005654;nucleoplasm;7.9404771813433e-14!GO:0006464;protein modification process;8.55433067822326e-14!GO:0032553;ribonucleotide binding;9.92606739995296e-14!GO:0032555;purine ribonucleotide binding;9.92606739995296e-14!GO:0005746;mitochondrial respiratory chain;1.13693952674061e-13!GO:0010467;gene expression;2.12128338296647e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.83271421090986e-13!GO:0050136;NADH dehydrogenase (quinone) activity;3.98213602694394e-13!GO:0003954;NADH dehydrogenase activity;3.98213602694394e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.98213602694394e-13!GO:0044451;nucleoplasm part;5.4361107686437e-13!GO:0045045;secretory pathway;5.84289924517597e-13!GO:0003735;structural constituent of ribosome;7.0079124260604e-13!GO:0017076;purine nucleotide binding;1.14633311558288e-12!GO:0016874;ligase activity;2.36631175527635e-12!GO:0030695;GTPase regulator activity;2.58044509703019e-12!GO:0007264;small GTPase mediated signal transduction;6.04055832243101e-12!GO:0048770;pigment granule;6.06001019328298e-12!GO:0042470;melanosome;6.06001019328298e-12!GO:0043228;non-membrane-bound organelle;7.48708491579469e-12!GO:0043232;intracellular non-membrane-bound organelle;7.48708491579469e-12!GO:0006457;protein folding;1.3483145889799e-11!GO:0008134;transcription factor binding;2.99987557833959e-11!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.29269208449431e-11!GO:0008092;cytoskeletal protein binding;3.29457081909496e-11!GO:0030964;NADH dehydrogenase complex (quinone);3.71225837782096e-11!GO:0045271;respiratory chain complex I;3.71225837782096e-11!GO:0005747;mitochondrial respiratory chain complex I;3.71225837782096e-11!GO:0012505;endomembrane system;4.13921342782608e-11!GO:0048193;Golgi vesicle transport;4.23252399228982e-11!GO:0033279;ribosomal subunit;4.69555706896736e-11!GO:0006793;phosphorus metabolic process;5.87623408309527e-11!GO:0006796;phosphate metabolic process;5.87623408309527e-11!GO:0005083;small GTPase regulator activity;6.32708103353626e-11!GO:0042775;organelle ATP synthesis coupled electron transport;6.67141417372917e-11!GO:0042773;ATP synthesis coupled electron transport;6.67141417372917e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.08924664492623e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;1.38952138982572e-10!GO:0006511;ubiquitin-dependent protein catabolic process;1.48617678292041e-10!GO:0019941;modification-dependent protein catabolic process;2.0879624059559e-10!GO:0043632;modification-dependent macromolecule catabolic process;2.0879624059559e-10!GO:0009058;biosynthetic process;2.51036103242783e-10!GO:0044257;cellular protein catabolic process;3.447086177119e-10!GO:0022618;protein-RNA complex assembly;4.93750866289496e-10!GO:0030135;coated vesicle;5.9732965341115e-10!GO:0007010;cytoskeleton organization and biogenesis;6.13308867404881e-10!GO:0031980;mitochondrial lumen;1.00489298481303e-09!GO:0005759;mitochondrial matrix;1.00489298481303e-09!GO:0005768;endosome;1.2269736631445e-09!GO:0009059;macromolecule biosynthetic process;1.73642646497588e-09!GO:0044265;cellular macromolecule catabolic process;2.13068618470338e-09!GO:0016604;nuclear body;2.42065947814423e-09!GO:0019829;cation-transporting ATPase activity;2.67649602405726e-09!GO:0006605;protein targeting;3.00945068742182e-09!GO:0051082;unfolded protein binding;3.09237421578834e-09!GO:0006810;transport;3.26937125407678e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.42913622175962e-09!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.53745416097966e-09!GO:0043285;biopolymer catabolic process;4.8133954125548e-09!GO:0044445;cytosolic part;6.945468272493e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.67850089830674e-09!GO:0003924;GTPase activity;7.68461509628472e-09!GO:0008565;protein transporter activity;8.75072570104299e-09!GO:0000502;proteasome complex (sensu Eukaryota);9.02046521990053e-09!GO:0044249;cellular biosynthetic process;9.02046521990053e-09!GO:0032559;adenyl ribonucleotide binding;1.03392643593336e-08!GO:0008135;translation factor activity, nucleic acid binding;1.18256299202376e-08!GO:0016044;membrane organization and biogenesis;1.25086866452913e-08!GO:0016607;nuclear speck;1.68821124404241e-08!GO:0032940;secretion by cell;1.73318068843214e-08!GO:0030163;protein catabolic process;2.00080546892253e-08!GO:0007399;nervous system development;2.00207822402448e-08!GO:0008639;small protein conjugating enzyme activity;2.39358929139296e-08!GO:0030036;actin cytoskeleton organization and biogenesis;2.88067181998553e-08!GO:0004842;ubiquitin-protein ligase activity;3.35738016046184e-08!GO:0005524;ATP binding;3.85816976075921e-08!GO:0016310;phosphorylation;5.00760103710184e-08!GO:0019787;small conjugating protein ligase activity;5.04064607821066e-08!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.43818522796968e-08!GO:0015630;microtubule cytoskeleton;7.66159937933466e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.78173002593809e-08!GO:0019899;enzyme binding;7.82131093421247e-08!GO:0005525;GTP binding;7.87408564373087e-08!GO:0030554;adenyl nucleotide binding;9.37167253116583e-08!GO:0006461;protein complex assembly;1.01221169361141e-07!GO:0043005;neuron projection;1.28511625947587e-07!GO:0019717;synaptosome;1.45066398560822e-07!GO:0015986;ATP synthesis coupled proton transport;1.71586849272986e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.71586849272986e-07!GO:0044431;Golgi apparatus part;1.84718092639843e-07!GO:0030029;actin filament-based process;1.92740097033623e-07!GO:0009057;macromolecule catabolic process;2.86022005797738e-07!GO:0051179;localization;3.15130625657468e-07!GO:0006913;nucleocytoplasmic transport;3.15130625657468e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;3.57364777675486e-07!GO:0000375;RNA splicing, via transesterification reactions;3.57364777675486e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.57364777675486e-07!GO:0016070;RNA metabolic process;4.36800552700924e-07!GO:0051234;establishment of localization;5.10573139169469e-07!GO:0051169;nuclear transport;5.20459000390848e-07!GO:0030136;clathrin-coated vesicle;7.41127875625862e-07!GO:0006446;regulation of translational initiation;8.02238491167215e-07!GO:0015631;tubulin binding;8.0475534623874e-07!GO:0015935;small ribosomal subunit;9.2223287866905e-07!GO:0044248;cellular catabolic process;9.62221772593191e-07!GO:0016881;acid-amino acid ligase activity;1.02034202098354e-06!GO:0008287;protein serine/threonine phosphatase complex;1.09582311788826e-06!GO:0031965;nuclear membrane;1.11733768598408e-06!GO:0031252;leading edge;1.19050345723146e-06!GO:0048523;negative regulation of cellular process;1.23580348535327e-06!GO:0005783;endoplasmic reticulum;1.53894607050736e-06!GO:0007265;Ras protein signal transduction;1.57852115945083e-06!GO:0044440;endosomal part;1.65845806638181e-06!GO:0010008;endosome membrane;1.65845806638181e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;1.80984356526468e-06!GO:0016887;ATPase activity;1.80984356526468e-06!GO:0032561;guanyl ribonucleotide binding;1.89616516987999e-06!GO:0019001;guanyl nucleotide binding;1.89616516987999e-06!GO:0006413;translational initiation;1.90967683177718e-06!GO:0007242;intracellular signaling cascade;2.08495142401156e-06!GO:0048471;perinuclear region of cytoplasm;2.12009827809896e-06!GO:0003779;actin binding;2.3235341599509e-06!GO:0003712;transcription cofactor activity;2.46998029624886e-06!GO:0005635;nuclear envelope;2.60208100452768e-06!GO:0042623;ATPase activity, coupled;3.29965443949941e-06!GO:0003743;translation initiation factor activity;3.39814620220109e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.53770958288367e-06!GO:0005874;microtubule;3.8327210264259e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.8327210264259e-06!GO:0016568;chromatin modification;4.01361238928227e-06!GO:0005730;nucleolus;4.13213352889294e-06!GO:0048475;coated membrane;4.46898786261008e-06!GO:0030117;membrane coat;4.46898786261008e-06!GO:0051186;cofactor metabolic process;4.80955855912971e-06!GO:0046034;ATP metabolic process;4.97717600204955e-06!GO:0006754;ATP biosynthetic process;5.21555023730402e-06!GO:0006753;nucleoside phosphate metabolic process;5.21555023730402e-06!GO:0016469;proton-transporting two-sector ATPase complex;6.77038360308471e-06!GO:0009060;aerobic respiration;7.4242945351267e-06!GO:0051056;regulation of small GTPase mediated signal transduction;7.57954508454311e-06!GO:0008047;enzyme activator activity;7.80960178185808e-06!GO:0006323;DNA packaging;8.10705129943827e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.00222208453227e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.18542279732102e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.18542279732102e-05!GO:0032446;protein modification by small protein conjugation;1.19221449270127e-05!GO:0005096;GTPase activator activity;1.28409795488419e-05!GO:0006897;endocytosis;1.28646903195766e-05!GO:0010324;membrane invagination;1.28646903195766e-05!GO:0016564;transcription repressor activity;1.33160569031035e-05!GO:0045333;cellular respiration;1.35720275667317e-05!GO:0009199;ribonucleoside triphosphate metabolic process;1.49355632122699e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.49355632122699e-05!GO:0005905;coated pit;1.68305307313402e-05!GO:0005770;late endosome;1.79300405007681e-05!GO:0000139;Golgi membrane;1.81281637794005e-05!GO:0009141;nucleoside triphosphate metabolic process;1.81969964176098e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.81969964176098e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.82953756380362e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.82953756380362e-05!GO:0009152;purine ribonucleotide biosynthetic process;2.2068119000682e-05!GO:0051128;regulation of cellular component organization and biogenesis;2.23762649801141e-05!GO:0048519;negative regulation of biological process;2.2978674065598e-05!GO:0009142;nucleoside triphosphate biosynthetic process;2.41068225326556e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.41068225326556e-05!GO:0006164;purine nucleotide biosynthetic process;2.47242549655218e-05!GO:0009150;purine ribonucleotide metabolic process;2.51808856916945e-05!GO:0016567;protein ubiquitination;2.5206542234723e-05!GO:0006163;purine nucleotide metabolic process;2.63878657097561e-05!GO:0005769;early endosome;2.70851547573493e-05!GO:0008017;microtubule binding;3.25312101245025e-05!GO:0005761;mitochondrial ribosome;3.39261132547059e-05!GO:0000313;organellar ribosome;3.39261132547059e-05!GO:0017038;protein import;3.72420431491022e-05!GO:0006259;DNA metabolic process;3.91525619897681e-05!GO:0015934;large ribosomal subunit;3.97288847053026e-05!GO:0005085;guanyl-nucleotide exchange factor activity;4.40358196515492e-05!GO:0009259;ribonucleotide metabolic process;5.08473045054509e-05!GO:0045259;proton-transporting ATP synthase complex;5.54743838986567e-05!GO:0006099;tricarboxylic acid cycle;6.28374504354671e-05!GO:0046356;acetyl-CoA catabolic process;6.28374504354671e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;6.59648849685453e-05!GO:0015399;primary active transmembrane transporter activity;6.59648849685453e-05!GO:0009055;electron carrier activity;7.14796694458988e-05!GO:0050789;regulation of biological process;7.71152311717791e-05!GO:0030027;lamellipodium;8.08036771913282e-05!GO:0045786;negative regulation of progression through cell cycle;9.15667636013805e-05!GO:0030120;vesicle coat;9.90560981696233e-05!GO:0030662;coated vesicle membrane;9.90560981696233e-05!GO:0009260;ribonucleotide biosynthetic process;0.000100894082562148!GO:0005798;Golgi-associated vesicle;0.000104377955084614!GO:0006403;RNA localization;0.000123838683245953!GO:0030425;dendrite;0.000129613266017092!GO:0043492;ATPase activity, coupled to movement of substances;0.000129613266017092!GO:0000245;spliceosome assembly;0.000133642168259022!GO:0050794;regulation of cellular process;0.000135261381357223!GO:0009109;coenzyme catabolic process;0.000147032791379389!GO:0044453;nuclear membrane part;0.000156214422586864!GO:0050657;nucleic acid transport;0.000158895932950374!GO:0051236;establishment of RNA localization;0.000158895932950374!GO:0050658;RNA transport;0.000158895932950374!GO:0000151;ubiquitin ligase complex;0.000168626035453811!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000182689810212404!GO:0003676;nucleic acid binding;0.00018578076405227!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);0.00019537697963739!GO:0000159;protein phosphatase type 2A complex;0.000207449718537315!GO:0006732;coenzyme metabolic process;0.000226118710314933!GO:0048489;synaptic vesicle transport;0.000232156434526998!GO:0051246;regulation of protein metabolic process;0.000232156434526998!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000235370091744222!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000237749083915617!GO:0006366;transcription from RNA polymerase II promoter;0.00024861469439286!GO:0005643;nuclear pore;0.000254463309680634!GO:0022890;inorganic cation transmembrane transporter activity;0.000259940679225238!GO:0003714;transcription corepressor activity;0.000270993267730508!GO:0016301;kinase activity;0.000272346920280879!GO:0000902;cell morphogenesis;0.000280487083410972!GO:0032989;cellular structure morphogenesis;0.000280487083410972!GO:0006084;acetyl-CoA metabolic process;0.00031641644123415!GO:0046578;regulation of Ras protein signal transduction;0.000329842278830486!GO:0008021;synaptic vesicle;0.000332783362856473!GO:0051187;cofactor catabolic process;0.000343807862586368!GO:0004721;phosphoprotein phosphatase activity;0.000355281781814945!GO:0031072;heat shock protein binding;0.000406428790480621!GO:0003729;mRNA binding;0.000495249049548949!GO:0043566;structure-specific DNA binding;0.000517389710980497!GO:0008601;protein phosphatase type 2A regulator activity;0.000562936728537202!GO:0006888;ER to Golgi vesicle-mediated transport;0.000563626787128494!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);0.000563626787128494!GO:0016311;dephosphorylation;0.00056662922440339!GO:0007266;Rho protein signal transduction;0.000567023502848055!GO:0004674;protein serine/threonine kinase activity;0.000567379699206493!GO:0006606;protein import into nucleus;0.000578583574254308!GO:0008026;ATP-dependent helicase activity;0.000598562848648502!GO:0007019;microtubule depolymerization;0.000615086735276614!GO:0005793;ER-Golgi intermediate compartment;0.000640370506157674!GO:0051276;chromosome organization and biogenesis;0.000642096492866757!GO:0005938;cell cortex;0.000674016297078896!GO:0019208;phosphatase regulator activity;0.00068930488594861!GO:0003724;RNA helicase activity;0.00072231272276074!GO:0016791;phosphoric monoester hydrolase activity;0.000723452247861799!GO:0051170;nuclear import;0.00072382644402836!GO:0009892;negative regulation of metabolic process;0.000726285253798185!GO:0044432;endoplasmic reticulum part;0.000739354343914212!GO:0006613;cotranslational protein targeting to membrane;0.000744414754105468!GO:0051087;chaperone binding;0.000869725330193861!GO:0005773;vacuole;0.000882808559823016!GO:0043623;cellular protein complex assembly;0.00095245161021291!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000976955886026317!GO:0009056;catabolic process;0.00102228883834529!GO:0004386;helicase activity;0.00102228883834529!GO:0030133;transport vesicle;0.00103365533578739!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00103649265948414!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00107042169797958!GO:0009966;regulation of signal transduction;0.00113896321709119!GO:0019902;phosphatase binding;0.00114412430389647!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00114966521024812!GO:0005875;microtubule associated complex;0.00115753798701235!GO:0008219;cell death;0.00121287211325231!GO:0016265;death;0.00121287211325231!GO:0045055;regulated secretory pathway;0.00122310920262847!GO:0022406;membrane docking;0.00122797669941346!GO:0048278;vesicle docking;0.00122797669941346!GO:0016481;negative regulation of transcription;0.00124618599412947!GO:0051188;cofactor biosynthetic process;0.00129581661465476!GO:0006607;NLS-bearing substrate import into nucleus;0.00130293485754691!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00132992719916117!GO:0019904;protein domain specific binding;0.00137838136283687!GO:0030118;clathrin coat;0.00139485998872978!GO:0016197;endosome transport;0.00139578562375578!GO:0006904;vesicle docking during exocytosis;0.00144437424377917!GO:0006470;protein amino acid dephosphorylation;0.00145140792981447!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00145345360122302!GO:0004812;aminoacyl-tRNA ligase activity;0.00145345360122302!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00145345360122302!GO:0005741;mitochondrial outer membrane;0.00145616192927712!GO:0006402;mRNA catabolic process;0.00149348926167288!GO:0051028;mRNA transport;0.00164260545011793!GO:0031114;regulation of microtubule depolymerization;0.00193335511877357!GO:0007026;negative regulation of microtubule depolymerization;0.00193335511877357!GO:0012501;programmed cell death;0.00199430701885577!GO:0016050;vesicle organization and biogenesis;0.00204975223114238!GO:0030867;rough endoplasmic reticulum membrane;0.00205926992569877!GO:0007049;cell cycle;0.00207069786908671!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00210522330380146!GO:0030532;small nuclear ribonucleoprotein complex;0.00211734212028068!GO:0007269;neurotransmitter secretion;0.00217015656581478!GO:0006915;apoptosis;0.00217744999910648!GO:0005813;centrosome;0.00231834397579229!GO:0019888;protein phosphatase regulator activity;0.00237507828967303!GO:0050767;regulation of neurogenesis;0.00243296992462651!GO:0031901;early endosome membrane;0.00256596817211437!GO:0051726;regulation of cell cycle;0.00257437893702557!GO:0008154;actin polymerization and/or depolymerization;0.00257940682259313!GO:0004722;protein serine/threonine phosphatase activity;0.00267809786458774!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00275266682654119!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00277549603857708!GO:0006650;glycerophospholipid metabolic process;0.00288618890382713!GO:0043038;amino acid activation;0.00291229916065235!GO:0006418;tRNA aminoacylation for protein translation;0.00291229916065235!GO:0043039;tRNA aminoacylation;0.00291229916065235!GO:0006752;group transfer coenzyme metabolic process;0.0030937094694873!GO:0005791;rough endoplasmic reticulum;0.00312468730051045!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00313028788357596!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00313028788357596!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00313028788357596!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00320083128911902!GO:0006892;post-Golgi vesicle-mediated transport;0.00321249216057325!GO:0007017;microtubule-based process;0.00321249216057325!GO:0051261;protein depolymerization;0.00327194178622218!GO:0001726;ruffle;0.00340380258024338!GO:0006333;chromatin assembly or disassembly;0.00343655872810633!GO:0031968;organelle outer membrane;0.00347293642090535!GO:0003697;single-stranded DNA binding;0.00366624278060496!GO:0003713;transcription coactivator activity;0.00366624278060496!GO:0019867;outer membrane;0.00367913684758108!GO:0016363;nuclear matrix;0.00376768879167564!GO:0000074;regulation of progression through cell cycle;0.00391741542729332!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.00391741542729332!GO:0008139;nuclear localization sequence binding;0.00399503507063998!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00403859060363905!GO:0005100;Rho GTPase activator activity;0.00410211930649748!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00413050743900352!GO:0031324;negative regulation of cellular metabolic process;0.00432161036571098!GO:0005099;Ras GTPase activator activity;0.00432200898054867!GO:0008286;insulin receptor signaling pathway;0.00432351736610278!GO:0031902;late endosome membrane;0.00469995242324761!GO:0008654;phospholipid biosynthetic process;0.00477804241022324!GO:0005789;endoplasmic reticulum membrane;0.00481381062644232!GO:0000323;lytic vacuole;0.00484862735006597!GO:0005764;lysosome;0.00484862735006597!GO:0044448;cell cortex part;0.0048732255179899!GO:0005815;microtubule organizing center;0.00509812370465782!GO:0048468;cell development;0.00509812370465782!GO:0005048;signal sequence binding;0.00509812370465782!GO:0009108;coenzyme biosynthetic process;0.00521541788361759!GO:0051168;nuclear export;0.00524869957362961!GO:0045892;negative regulation of transcription, DNA-dependent;0.00526431291552739!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00548472396112026!GO:0055083;monovalent inorganic anion homeostasis;0.00548472396112026!GO:0055064;chloride ion homeostasis;0.00548472396112026!GO:0030644;cellular chloride ion homeostasis;0.00548472396112026!GO:0006887;exocytosis;0.00548617315113765!GO:0016740;transferase activity;0.00572212316199326!GO:0048487;beta-tubulin binding;0.00594051665639464!GO:0030426;growth cone;0.00613313850083069!GO:0051427;hormone receptor binding;0.00618143411026888!GO:0005516;calmodulin binding;0.00629468935592313!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00634194749507528!GO:0006891;intra-Golgi vesicle-mediated transport;0.00634221621344977!GO:0030427;site of polarized growth;0.00652855284322396!GO:0012506;vesicle membrane;0.0065808421532272!GO:0005869;dynactin complex;0.00695450511673865!GO:0050839;cell adhesion molecule binding;0.00708206951689868!GO:0019226;transmission of nerve impulse;0.00708441296798008!GO:0005839;proteasome core complex (sensu Eukaryota);0.00742474423163487!GO:0006612;protein targeting to membrane;0.00755107849828996!GO:0007272;ensheathment of neurons;0.0077116849364296!GO:0008366;axon ensheathment;0.0077116849364296!GO:0006916;anti-apoptosis;0.00773197623261898!GO:0008186;RNA-dependent ATPase activity;0.00776512950427999!GO:0032011;ARF protein signal transduction;0.00776512950427999!GO:0032012;regulation of ARF protein signal transduction;0.00776512950427999!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00787880028216034!GO:0030258;lipid modification;0.00815241262034736!GO:0030054;cell junction;0.00816691354645106!GO:0033673;negative regulation of kinase activity;0.0083603880010383!GO:0006469;negative regulation of protein kinase activity;0.0083603880010383!GO:0043209;myelin sheath;0.00847110431984918!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00854391540608018!GO:0050811;GABA receptor binding;0.008826563057272!GO:0019887;protein kinase regulator activity;0.00903416131749274!GO:0046467;membrane lipid biosynthetic process;0.00912502781149632!GO:0015629;actin cytoskeleton;0.0091706856685873!GO:0030424;axon;0.00990502709959724!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00990502709959724!GO:0004667;prostaglandin-D synthase activity;0.00990502709959724!GO:0050802;circadian sleep/wake cycle, sleep;0.00990502709959724!GO:0022410;circadian sleep/wake cycle process;0.00990502709959724!GO:0042749;regulation of circadian sleep/wake cycle;0.00990502709959724!GO:0015980;energy derivation by oxidation of organic compounds;0.00998863468540905!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0100364671444025!GO:0043087;regulation of GTPase activity;0.0103201760294707!GO:0042578;phosphoric ester hydrolase activity;0.0104103454700066!GO:0035257;nuclear hormone receptor binding;0.010536759990966!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.0105994313858026!GO:0019198;transmembrane receptor protein phosphatase activity;0.0105994313858026!GO:0048167;regulation of synaptic plasticity;0.0108897530508869!GO:0051920;peroxiredoxin activity;0.0115859064289272!GO:0001508;regulation of action potential;0.011601173632035!GO:0046930;pore complex;0.0118253149628425!GO:0046488;phosphatidylinositol metabolic process;0.0123181379890757!GO:0030660;Golgi-associated vesicle membrane;0.0123369916416334!GO:0030742;GTP-dependent protein binding;0.0125657497697223!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0132005160474635!GO:0019903;protein phosphatase binding;0.0132646113111401!GO:0043069;negative regulation of programmed cell death;0.0132794478687416!GO:0030658;transport vesicle membrane;0.0136480139520506!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.0136999177501952!GO:0042254;ribosome biogenesis and assembly;0.0136999177501952!GO:0051348;negative regulation of transferase activity;0.0139208858618228!GO:0043066;negative regulation of apoptosis;0.0142436967102722!GO:0044433;cytoplasmic vesicle part;0.0151963307023588!GO:0035035;histone acetyltransferase binding;0.0151963307023588!GO:0042802;identical protein binding;0.0153842246691528!GO:0030384;phosphoinositide metabolic process;0.0155204647257365!GO:0030041;actin filament polymerization;0.015693377598744!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0159882891073888!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0159882891073888!GO:0033043;regulation of organelle organization and biogenesis;0.0159882891073888!GO:0048699;generation of neurons;0.0160756088141358!GO:0031124;mRNA 3'-end processing;0.0161963538328895!GO:0065002;intracellular protein transport across a membrane;0.0163350135081399!GO:0050803;regulation of synapse structure and activity;0.0163350135081399!GO:0022008;neurogenesis;0.0163350135081399!GO:0048500;signal recognition particle;0.0171652329439156!GO:0005885;Arp2/3 protein complex;0.0174311752618865!GO:0030132;clathrin coat of coated pit;0.0181681100592212!GO:0043021;ribonucleoprotein binding;0.0182179108826018!GO:0005774;vacuolar membrane;0.0183965081428246!GO:0004672;protein kinase activity;0.0187110723571813!GO:0051020;GTPase binding;0.018800454033952!GO:0019783;small conjugating protein-specific protease activity;0.0188466036100827!GO:0000059;protein import into nucleus, docking;0.0189221761157303!GO:0004004;ATP-dependent RNA helicase activity;0.0191120723818253!GO:0003690;double-stranded DNA binding;0.0193770776990827!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0195302565347613!GO:0006643;membrane lipid metabolic process;0.0200129083009174!GO:0065007;biological regulation;0.020309744118374!GO:0006401;RNA catabolic process;0.0204829762381384!GO:0008361;regulation of cell size;0.0206697102193956!GO:0051540;metal cluster binding;0.0206697102193956!GO:0051536;iron-sulfur cluster binding;0.0206697102193956!GO:0045296;cadherin binding;0.0210052955125526!GO:0006414;translational elongation;0.021073025964052!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.0217817952423005!GO:0019207;kinase regulator activity;0.0219867872950304!GO:0035023;regulation of Rho protein signal transduction;0.0226940507645689!GO:0051789;response to protein stimulus;0.0228619036320191!GO:0006986;response to unfolded protein;0.0228619036320191!GO:0005092;GDP-dissociation inhibitor activity;0.023079413048145!GO:0004843;ubiquitin-specific protease activity;0.0234924887352603!GO:0004298;threonine endopeptidase activity;0.023976047825277!GO:0001505;regulation of neurotransmitter levels;0.0240730140540591!GO:0043086;negative regulation of catalytic activity;0.0246587015123033!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0248504484622909!GO:0042026;protein refolding;0.0256378957252366!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0262482622000965!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0262482622000965!GO:0005868;cytoplasmic dynein complex;0.0263801693015751!GO:0008088;axon cargo transport;0.0266777260074953!GO:0030137;COPI-coated vesicle;0.0277899047957197!GO:0000118;histone deacetylase complex;0.0285014126200701!GO:0051252;regulation of RNA metabolic process;0.0289533363113745!GO:0007034;vacuolar transport;0.0290103876982357!GO:0016859;cis-trans isomerase activity;0.0292761254293086!GO:0000314;organellar small ribosomal subunit;0.02927693631237!GO:0005763;mitochondrial small ribosomal subunit;0.02927693631237!GO:0006376;mRNA splice site selection;0.0293643503684063!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0293643503684063!GO:0005856;cytoskeleton;0.029509519199994!GO:0031109;microtubule polymerization or depolymerization;0.0295114046865087!GO:0003746;translation elongation factor activity;0.0295884330632964!GO:0019894;kinesin binding;0.0297621855797297!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.029856492267808!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0299108056463381!GO:0030182;neuron differentiation;0.0310098191996165!GO:0005952;cAMP-dependent protein kinase complex;0.0314780339194408!GO:0035258;steroid hormone receptor binding;0.0314780339194408!GO:0006468;protein amino acid phosphorylation;0.0317943289723135!GO:0031371;ubiquitin conjugating enzyme complex;0.0321881969209237!GO:0019911;structural constituent of myelin sheath;0.0331825670789867!GO:0005765;lysosomal membrane;0.0333431348515211!GO:0051539;4 iron, 4 sulfur cluster binding;0.033480187938163!GO:0030125;clathrin vesicle coat;0.033480187938163!GO:0030665;clathrin coated vesicle membrane;0.033480187938163!GO:0017166;vinculin binding;0.0334875639710506!GO:0000209;protein polyubiquitination;0.0335121542046651!GO:0000062;acyl-CoA binding;0.0341849025922796!GO:0004221;ubiquitin thiolesterase activity;0.0341849025922796!GO:0008022;protein C-terminus binding;0.0343304468235381!GO:0005667;transcription factor complex;0.0344833518308572!GO:0003725;double-stranded RNA binding;0.0351258448814257!GO:0043681;protein import into mitochondrion;0.0352709943692961!GO:0043488;regulation of mRNA stability;0.0363943202848736!GO:0043487;regulation of RNA stability;0.0363943202848736!GO:0005545;phosphatidylinositol binding;0.0364929987352081!GO:0051287;NAD binding;0.0365629062952878!GO:0030911;TPR domain binding;0.0365629062952878!GO:0030030;cell projection organization and biogenesis;0.0365629062952878!GO:0048858;cell projection morphogenesis;0.0365629062952878!GO:0032990;cell part morphogenesis;0.0365629062952878!GO:0016049;cell growth;0.0367898615586588!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0369297461723487!GO:0030659;cytoplasmic vesicle membrane;0.0370762688400318!GO:0016585;chromatin remodeling complex;0.0372428008706515!GO:0042995;cell projection;0.0379199452643419!GO:0031267;small GTPase binding;0.0382123710095222!GO:0006378;mRNA polyadenylation;0.0391321068652882!GO:0007243;protein kinase cascade;0.0395949225734461!GO:0031110;regulation of microtubule polymerization or depolymerization;0.0409731325592322!GO:0000287;magnesium ion binding;0.0413169808204449!GO:0007050;cell cycle arrest;0.0413567838325246!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0417854592440654!GO:0015002;heme-copper terminal oxidase activity;0.0417854592440654!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0417854592440654!GO:0004129;cytochrome-c oxidase activity;0.0417854592440654!GO:0006974;response to DNA damage stimulus;0.042050254937919!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0428179643629585!GO:0016079;synaptic vesicle exocytosis;0.0441118928159299!GO:0001578;microtubule bundle formation;0.044321750531151!GO:0006383;transcription from RNA polymerase III promoter;0.0444574866195484!GO:0017016;Ras GTPase binding;0.0452907351720032!GO:0031123;RNA 3'-end processing;0.0462884486028199!GO:0032535;regulation of cellular component size;0.0463852671153497!GO:0003711;transcription elongation regulator activity;0.0470803368265239!GO:0046839;phospholipid dephosphorylation;0.0473615536751846!GO:0004183;carboxypeptidase E activity;0.0480603075466373!GO:0030070;insulin processing;0.0480603075466373!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0481224826990005!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0483040382877476!GO:0045047;protein targeting to ER;0.0483040382877476!GO:0006364;rRNA processing;0.0495631240812936
 |sample_id=10156
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=medial temporal gyrus
 |top_motifs=MYFfamily:3.79668972681;DBP:3.79353758765;CUX2:3.76287172979;RREB1:3.65537105897;PRRX1,2:3.61964823225;REST:3.57368581869;NHLH1,2:3.56669034391;AHR_ARNT_ARNT2:3.56007413674;PRDM1:3.46654073862;HOXA9_MEIS1:3.37546528277;ZFP161:3.3315129548;EGR1..3:3.29167545368;OCT4_SOX2{dimer}:3.07993073556;ATF2:3.05344538419;MTE{core}:3.01832366409;MED-1{core}:3.00284688832;GATA4:2.9936994666;POU5F1:2.90253593465;PAX6:2.85401682352;GTF2I:2.82281211439;SOX2:2.81038169783;ZBTB6:2.77761328765;HBP1_HMGB_SSRP1_UBTF:2.72193488613;MZF1:2.64332574602;POU6F1:2.62765369977;TFAP2B:2.59227499348;NKX3-2:2.51533132025;BPTF:2.50773611416;FOXD3:2.50195445241;MTF1:2.49721901402;FOXQ1:2.48872874904;IKZF2:2.45847053851;ZNF384:2.40853332253;SOX5:2.34679061252;RFX2..5_RFXANK_RFXAP:2.33314757879;PAX4:2.33084965596;PATZ1:2.25633453155;FOXP1:2.23440264274;RFX1:2.20244240547;HIC1:2.19815959107;SOX{8,9,10}:2.1896798691;FOXM1:2.05735383806;ARID5B:2.04714261829;TGIF1:1.98434571758;PAX5:1.97488911078;NFIL3:1.9608494563;POU3F1..4:1.95819295708;FOX{F1,F2,J1}:1.94747105267;KLF4:1.9278741167;T:1.91517498994;BREu{core}:1.89354746932;HOX{A4,D4}:1.87888726186;CDC5L:1.85451795832;LMO2:1.85172501759;NKX6-1,2:1.82193446313;HMGA1,2:1.81733604565;TEF:1.76449445165;GFI1B:1.74129425966;NFIX:1.73242009409;MAZ:1.72295880274;SMAD1..7,9:1.68974848606;NRF1:1.55181770969;SOX17:1.51404259317;EP300:1.50440450444;POU1F1:1.48759668146;FOXP3:1.36759754179;XBP1:1.28649519859;LEF1_TCF7_TCF7L1,2:1.28436363866;TFDP1:1.2609588438;ZBTB16:1.24976146958;AR:1.23784535834;RBPJ:1.17674524307;ZNF143:1.11592659245;ALX1:1.05464639357;HAND1,2:1.05386733741;FOX{D1,D2}:1.02744354449;ADNP_IRX_SIX_ZHX:0.993371462378;JUN:0.974789516808;NR3C1:0.956315608826;TLX2:0.952585083005;SP1:0.947969942274;GCM1,2:0.939193762946;TOPORS:0.928052052981;MAFB:0.926063646563;ZNF238:0.904709987062;GTF2A1,2:0.901717078624;STAT1,3:0.882667513775;EBF1:0.857319402587;FOXL1:0.802920381313;STAT2,4,6:0.802294495539;SPZ1:0.800745728287;MYBL2:0.79085145935;SREBF1,2:0.766918785236;NANOG:0.754476540206;ONECUT1,2:0.744470019357;FOX{I1,J2}:0.740657542418;HMX1:0.740214788883;RORA:0.650362023934;ZNF423:0.631399836045;TLX1..3_NFIC{dimer}:0.604807181626;NKX2-3_NKX2-5:0.597227890455;CRX:0.58911172389;MYOD1:0.570450745821;TFAP2{A,C}:0.55903450939;GFI1:0.51902736615;CREB1:0.468629041042;ZEB1:0.440590752509;FOXN1:0.429279786306;FOXO1,3,4:0.390500509449;AIRE:0.388792435047;GZF1:0.36606848209;ESRRA:0.281319850907;ZIC1..3:0.264589796112;MEF2{A,B,C,D}:0.217519887183;ATF5_CREB3:0.191737390756;IRF7:0.169742772711;YY1:0.164148177605;PBX1:0.152132648251;UFEwm:0.120442062343;LHX3,4:0.07747285772;PAX2:0.0650223726758;PDX1:0.0277687478935;NFATC1..3:-0.0163507270784;NFY{A,B,C}:-0.0554869202687;ATF4:-0.0769873381679;IRF1,2:-0.0925257366098;XCPE1{core}:-0.116659197993;CDX1,2,4:-0.127583926316;NKX2-2,8:-0.13856951839;PAX1,9:-0.156067387421;PITX1..3:-0.16600991535;FOXA2:-0.20448843963;DMAP1_NCOR{1,2}_SMARC:-0.242219597845;IKZF1:-0.333846644303;NFE2L2:-0.369369998488;NKX3-1:-0.384761904986;SPI1:-0.393404807363;HSF1,2:-0.415820442918;PAX3,7:-0.43665820537;TBX4,5:-0.454550152066;HOX{A6,A7,B6,B7}:-0.471151531273;EVI1:-0.475495185668;bHLH_family:-0.529083509218;VSX1,2:-0.551921259633;NANOG{mouse}:-0.609618768253;CEBPA,B_DDIT3:-0.6134707485;SNAI1..3:-0.671369760364;SPIB:-0.678503613127;NFE2:-0.696716269955;GATA6:-0.749479169103;ETS1,2:-0.85828984551;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.898272160433;NR1H4:-0.972727723993;TFAP4:-0.986270072413;PAX8:-0.994240262174;HNF1A:-1.04137148104;HIF1A:-1.07273637184;HNF4A_NR2F1,2:-1.09107160743;E2F1..5:-1.09809293804;BACH2:-1.15322740312;TP53:-1.16249404073;TAL1_TCF{3,4,12}:-1.17584949896;TEAD1:-1.17731933593;FOSL2:-1.1951342821;POU2F1..3:-1.2300520687;ZNF148:-1.24248395985;FOS_FOS{B,L1}_JUN{B,D}:-1.24637728624;NFE2L1:-1.26648206751;ATF6:-1.30288938251;RUNX1..3:-1.33425069826;NFKB1_REL_RELA:-1.34916125644;ELK1,4_GABP{A,B1}:-1.35531664981;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.38965290348;NR5A1,2:-1.39109148958;TFCP2:-1.42528625292;ELF1,2,4:-1.4510398664;RXR{A,B,G}:-1.46419977345;HLF:-1.58409342245;NKX2-1,4:-1.58576035281;ALX4:-1.63811995151;GLI1..3:-1.70616831994;TBP:-1.70651035643;PPARG:-1.71721089326;MYB:-1.75143536502;RXRA_VDR{dimer}:-1.89696101923;ESR1:-1.8987754455;SRF:-1.94677419517;HOX{A5,B5}:-2.32083032777;STAT5{A,B}:-2.45054287941;NR6A1:-2.58298533512;EN1,2:-2.88998579279;HES1:-2.99224734044
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10156-103A3;search_select_hide=table117:FF:10156-103A3
 }}

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FF:10156-103A3: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 12:23, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0