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{{f5samples
{{f5samples
|id=FF:10800-110I8
|DRA_sample_Accession=CAGE@SAMD00005366
|name=small cell cervical cancer cell line:HCSC-1
|accession_numbers=CAGE;DRX008004;DRR008876;DRZ000301;DRZ001686;DRZ011651;DRZ013036
|sample_id=10800
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000002,UBERON:0000995,UBERON:0003134,UBERON:0001560,UBERON:0005156,UBERON:0000064,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474
|rna_tube_id=110I8
|rna_box=110
|rna_position=I8
|sample_cell_lot=
|sample_cell_catalog=jcrb1205
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=cervix
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=48
|sample_ethnicity=J
|rna_rin=
|rna_od260/230=1.81
|rna_od260/280=2.07
|sample_cell_type=unclassifiable
|sample_cell_line=HCSC-1
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=small cell cervical cancer
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=15.87789
|rna_concentration=0.58807
|sample_note=
|profile_hcage=CNhs11885,LSID830,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000002,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000474,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000990,UBERON:0000995,UBERON:0001062,UBERON:0001560,UBERON:0002050,UBERON:0002532,UBERON:0003100,UBERON:0003133,UBERON:0003134,UBERON:0003975,UBERON:0004120,UBERON:0004175,UBERON:0005156,UBERON:0005423,UBERON:0005795
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:120,DOID:4362
|ancestors_in_disease_facet=DOID:4,DOID:7
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0101967
|sample_description=
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr12:103351444..103351461,+!p1@ASCL1!2.76!572.92!ASCL1;;chr20:20348740..20348757,+!p1@INSM1!2.56!360.27!INSM1;;chr1:40367668..40367684,-!p2@MYCL1!2.42!262.71!MYCL1;;chr3:181429704..181429722,+!p1@SOX2!2.42!260.14!SOX2;;chr3:181429741..181429767,+!p2@SOX2!2.20!158.38!SOX2;;chr10:71333172..71333186,-!p1@NEUROG3!2.09!122.35!NEUROG3;;chr2:239148671..239148686,-!p1@HES6!2.06!397.70!HES6;;chr8:53166899..53166914,-!p3@ST18!1.91!80.48!ST18;;chr7:96654133..96654150,-!p1@DLX5!1.87!72.76!DLX5;;chr2:172967621..172967637,-!p1@DLX2!1.86!184.11!DLX2;;chr1:214161272..214161322,+!p1@PROX1!1.84!94.28!PROX1;;chr2:45236540..45236577,-!p1@SIX2!1.84!67.84!SIX2;;chr15:57511609..57511651,+!p2@TCF12!1.80!102.47!TCF12;;chr8:40755333..40755352,-!p1@ZMAT4!1.79!61.06!ZMAT4;;chr19:38720294..38720348,-!p1@DPF1!1.75!67.84!DPF1;;chr17:46622205..46622218,-!p3@HOXB2!1.69!55.21!HOXB2;;chr20:22564895..22564910,-!p1@FOXA2!1.69!47.96!FOXA2;;chr1:40367530..40367597,-!p1@MYCL1!1.66!78.84!MYCL1;;chr2:172950227..172950249,+!p2@DLX1!1.66!44.45!DLX1;;chr20:22565185..22565223,-!p3@FOXA2!1.62!40.71!FOXA2;;chr17:46675558..46675577,-!p2@HOXB6!1.62!40.24!HOXB6;;chr12:106976774..106976788,+!p1@RFX4!1.62!40.24!RFX4;;chr9:96717629..96717644,-!p1@BARX1!1.54!33.92!BARX1;;chr2:176972000..176972025,+!p4@HOXD11!1.54!33.69!HOXD11;;chr20:21378152..21378169,-!p1@NKX2-4!1.52!32.05!NKX2-4;;chr2:172949484..172949522,+!p1@DLX1!1.51!31.58!DLX1;;chr1:201979743..201979762,+!p1@ELF3!1.51!31.35!ELF3;;chr20:22565370..22565388,-!p2@FOXA2!1.51!31.11!FOXA2;;chr17:46671108..46671147,-!p1@HOXB5!1.48!29.24!HOXB5;;chr2:176969228..176969260,+!p1@HOXD11!1.46!27.84!HOXD11;;chr14:38064429..38064486,-!p1@FOXA1!1.45!26.90!FOXA1;;chr5:50679228..50679288,+!p1@ISL1!1.44!26.67!ISL1;;chr1:40367692..40367703,-!p3@MYCL1!1.42!25.27!MYCL1;;chr17:46622440..46622477,-!p5@HOXB2!1.39!26.44!HOXB2;;chr13:79177674..79177701,-!p1@POU4F1!1.38!23.16!POU4F1;;chr1:3569072..3569093,+!p1@TP73!1.35!21.52!TP73;;chr17:46667594..46667619,-!p1@HOXB3!1.33!20.59!HOXB3;;chr1:201979703..201979721,+!p2@ELF3!1.32!20.12!ELF3;;chr8:53162037..53162058,-!p5@ST18!1.32!19.88!ST18;;chr6:19837592..19837621,+!p1@ID4!1.30!113.46!ID4;;chr13:95364784..95364806,-!p1@SOX21!1.28!18.25!SOX21;;chr2:176994408..176994492,+!p1@HOXD8!1.24!16.38!HOXD8;;chr17:46675539..46675551,-!p7@HOXB6!1.23!16.14!HOXB6;;chr10:23481233..23481249,+!p1@PTF1A!1.23!16.14!PTF1A;;chr2:122042770..122042785,-!p1@TFCP2L1!1.22!15.67!TFCP2L1;;chr1:116383738..116383752,-!p1@NHLH2!1.22!15.44!NHLH2;;chr13:79177703..79177729,-!p2@POU4F1!1.21!15.21!POU4F1;;chr7:96634878..96634900,+!p2@DLX6!1.21!15.21!DLX6;;chr2:172967242..172967265,-!p2@DLX2!1.20!14.97!DLX2;;chr12:106976678..106976708,+!p2@RFX4!1.19!14.50!RFX4;;chr7:27205136..27205164,-!p1@HOXA9!1.19!14.50!HOXA9;;chr1:209979467..209979494,-!p1@IRF6!1.16!14.97!IRF6;;chr1:40942922..40942997,+!p1@ZNF642!1.14!33.45!ZNF642;;chr8:80679993..80680011,-!p1@HEY1!1.14!18.72!HEY1;;chr3:40547564..40547616,+!p1@ZNF620!1.13!17.55!ZNF620;;chr2:172967323..172967336,-!p4@DLX2!1.13!12.63!DLX2;;chr2:176972047..176972063,+!p7@HOXD11!1.13!12.63!HOXD11;;chr7:96654026..96654061,-!p2@DLX5!1.13!12.63!DLX5;;chr2:177053386..177053402,+!p1@HOXD1!1.12!12.16!HOXD1;;chr2:73520667..73520683,-!p1@EGR4!1.11!11.93!EGR4;;chr5:170736243..170736279,+!p1@TLX3!1.11!11.93!TLX3;;chr20:18039673..18039676,-!p4@OVOL2!1.11!11.93!OVOL2;;chr12:54393880..54393962,+!p1@HOXC9!1.11!11.93!HOXC9;;chr20:32274179..32274213,-!p1@E2F1!1.10!77.90!E2F1;;chr20:31350184..31350200,+!p1@DNMT3B!1.10!24.33!DNMT3B;;chr17:46667628..46667642,-!p2@HOXB3!1.10!11.46!HOXB3;;chr2:45236579..45236596,-!p2@SIX2!1.08!11.00!SIX2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.08!11.00!ZBED1;;chr17:42299455..42299485,-!p12@UBTF!1.07!15.21!UBTF;;chr18:72922743..72922761,+!p3@TSHZ1!1.06!35.09!TSHZ1;;chr9:114287433..114287513,+!p1@ZNF483!1.06!27.60!ZNF483;;chr7:156803329..156803362,-!p1@MNX1!1.06!10.53!MNX1;;chr16:52581025..52581072,-!p1@TOX3!1.06!10.53!TOX3;;chr17:46675619..46675642,-!p5@HOXB6!1.06!10.53!HOXB6;;chr1:214161328..214161348,+!p2@PROX1!1.05!10.29!PROX1;;chr1:27240455..27240474,-!p1@NR0B2!1.05!10.29!NR0B2;;chr12:103352277..103352324,+!p2@ASCL1!1.05!10.29!ASCL1;;chr5:72744594..72744609,-!p1@FOXD1!1.04!46.09!FOXD1;;chr18:56940611..56940660,-!p1@RAX!1.04!10.06!RAX;;chr20:32274150..32274166,-!p2@E2F1!1.03!18.25!E2F1;;chr12:27485785..27485816,+!p1@ARNTL2!1.02!66.44!ARNTL2;;chr1:214161358..214161377,+!p3@PROX1!1.02!9.59!PROX1;;chr2:172967276..172967296,-!p3@DLX2!1.02!9.59!DLX2;;chr2:42721205..42721307,+!p4@MTA3!1.02!9.36!MTA3;;chr2:8822176..8822196,+!p1@ID2!1.00!1291.58!ID2;;chr1:23857698..23857733,-!p1@E2F2!1.00!16.61!E2F2;;chr10:124895472..124895508,+!p1@HMX3!1.00!8.89!HMX3;;chr9:99180617..99180658,-!p1@ZNF367!0.99!19.42!ZNF367;;chr17:46688334..46688385,-!p1@HOXB7!0.98!12.40!HOXB7;;chr2:172967353..172967365,-!p5@DLX2!0.98!8.66!DLX2;;chr2:176973498..176973524,+!p1@HOXD10!0.98!8.66!HOXD10;;chr7:27196267..27196311,-!p1@HOXA7!0.98!8.66!HOXA7;;chr5:176738887..176738934,-!p1@MXD3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2!0.27!18.01!DDB2;;chr19:53898380..53898422,+!p1@ZNF765!0.27!9.59!ZNF765;;chr19:35759976..35760042,+!p4@USF2!0.27!8.19!USF2;;chr19:58090240..58090289,-!p1@ZNF416!0.27!7.72!ZNF416;;chr16:3285144..3285191,-!p1@ZNF200!0.27!7.49!ZNF200;;chr7:149470641..149470694,-!p1@ZNF467!0.27!7.02!ZNF467;;chr19:44331493..44331552,+!p1@ZNF283!0.27!5.38!ZNF283;;chr19:52674696..52674758,-!p1@ZNF836!0.27!4.21!ZNF836;;chr1:91487774..91487802,-!p2@ZNF644!0.27!3.74!ZNF644;;chr7:99647411..99647433,+!p2@ZSCAN21!0.27!3.74!ZSCAN21;;chr22:42666593..42666623,-!p@chr22:42666593..42666623,-!0.27!3.04!TCF20;;chr2:200323414..200323455,-!p1@SATB2!0.27!2.81!SATB2;;chr2:37458749..37458766,-!p2@CEBPZ!0.27!2.81!CEBPZ;;chr4:146402843..146402864,+!p3@SMAD1!0.27!2.57!SMAD1;;chr19:57752200..57752254,+!p3@ZNF805!0.27!2.57!ZNF805;;chr1:33004734..33004807,+!p2@ZBTB8A!0.27!2.34!ZBTB8A;;chr3:170075357..170075368,+!p3@SKIL!0.27!1.87!SKIL;;chr3:47823298..47823423,-!p1@SMARCC1!0.26!56.15!SMARCC1;;chr17:73780879..73780963,+!p1@UNK!0.26!27.14!UNK;;chr6:122720765..122720831,+!p1@HSF2!0.26!21.76!HSF2;;chr20:18269151..18269212,+!p1@ZNF133!0.26!13.33!ZNF133;;chr9:104161123..104161205,+!p1@ZNF189!0.26!11.00!ZNF189;;chr14:89883509..89883587,-!p2@FOXN3!0.26!10.53!FOXN3;;chr19:56110859..56110917,-!p1@FIZ1!0.26!10.06!FIZ1;;chr19:56826201..56826247,-!p1@ZSCAN5A!0.26!10.06!ZSCAN5A;;chr3:44519131..44519186,-!p1@ZNF445!0.26!8.42!ZNF445;;chr19:11071546..11071624,+!p2@SMARCA4!0.26!8.42!SMARCA4;;chr19:58361185..58361235,+!p2@ZNF587!0.26!8.19!ZNF587;;chr19:9546227..9546257,-!p2@ZNF266!0.26!7.72!ZNF266;;chr17:42298615..42298692,-!p2@UBTF!0.26!7.72!UBTF;;chr19:53073532..53073551,+!p1@ZNF701!0.26!6.78!ZNF701;;chr16:71918033..71918101,-!p1@ZNF821!0.26!5.38!ZNF821;;chr8:28748099..28748141,+!p2@HMBOX1!0.26!4.44!HMBOX1;;chr19:40596789..40596825,-!p2@ZNF780A!0.26!4.21!ZNF780A;;chr1:164528340..164528379,+!p4@PBX1!0.26!3.28!PBX1;;chr20:3388207..3388236,-!p4@C20orf194!0.26!3.28!C20orf194;;chr16:54320675..54320715,-!p1@IRX3!0.26!2.81!IRX3;;chr3:126194815..126194848,-!p2@ZXDC!0.26!2.81!ZXDC;;chr7:86781778..86781789,+!p4@DMTF1!0.26!2.57!DMTF1;;chr12:50479101..50479108,+!p3@SMARCD1!0.26!1.87!SMARCD1;;chr19:12551785..12551823,-!p1@ZNF443!0.26!1.87!ZNF443;;chr11:130184623..130184634,-!p6@ZBTB44!0.26!1.17!ZBTB44;;chr1:41204530..41204541,+!p8@NFYC!0.26!1.17!NFYC;;chr6:126112074..126112144,+!p1@NCOA7!0.25!21.29!NCOA7;;chr12:122516646..122516668,+!p1@MLXIP!0.25!21.05!MLXIP;;chr20:35201993..35202050,+!p1@TGIF2!0.25!17.78!TGIF2;;chr6:41514078..41514158,+!p1@FOXP4!0.25!13.80!FOXP4;;chr3:141868293..141868355,-!p2@TFDP2!0.25!13.33!TFDP2;;chr3:141747459..141747475,-!p1@TFDP2!0.25!12.63!TFDP2;;chr12:6798616..6798684,-!p2@ZNF384!0.25!10.29!ZNF384;;chr19:9434841..9434886,+!p1@ZNF559!0.25!7.49!ZNF559;;chr19:40596828..40596855,-!p1@ZNF780A!0.25!6.08!ZNF780A;;chr19:58331073..58331084,+!p3@ZNF587!0.25!5.38!ZNF587;;chr19:53696587..53696633,-!p1@ZNF665!0.25!5.15!ZNF665;;chr1:247242048..247242098,-!p1@ZNF670,p1@ZNF695!0.25!5.15!ZNF670;;chr21:44394742..44394756,+!p2@PKNOX1!0.25!2.81!PKNOX1;;chr2:208030886..208030917,-!p4@KLF7!0.25!2.34!KLF7;;chr3:44626446..44626477,+!p1@ZNF660!0.25!2.11!ZNF660;;chr6:15249128..15249177,+!p4@JARID2!0.25!2.11!JARID2;;chr7:6676930..6676939,+!p3@ENST00000427912!0.25!2.11!ZNF316;;chr14:89029308..89029318,+!p3@ZC3H14!0.25!1.87!ZC3H14;;chr19:35417798..35417842,+!p1@ZNF30!0.25!1.87!ZNF30;;chr3:170075124..170075136,+!p4@SKIL!0.25!1.40!SKIL;;chr12:11802547..11802560,+!p5@ETV6!0.25!1.40!ETV6;;chr11:8102819..8102845,+!p3@TUB!0.25!1.17!TUB;;chr19:2819943..2819977,+!p2@ZNF554!0.25!1.17!ZNF554;;chr1:249153309..249153330,-!p4@ZNF692!0.25!1.17!ZNF692;;chr6:10415276..10415341,-!p2@TFAP2A!0.25!1.17!TFAP2A;;
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0010316
|fonse_cell_line=FF:0101967
|fonse_cell_line=FF:0101967
|fonse_cell_line_closure=FF:0101967
|fonse_cell_line_closure=FF:0101967
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|comment=
|created_by=
|creation_date=
|def=
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|rna_box=110
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|rna_concentration=0.58807
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.81
|rna_od260/280=2.07
|rna_position=I8
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|rna_sample_type=total RNA
|rna_tube_id=110I8
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|sample_age=48
|sample_category=cell lines
|sample_cell_catalog=jcrb1205
|sample_cell_line=HCSC-1
|sample_cell_lot=
|sample_cell_type=unclassifiable
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|sample_description=
|sample_dev_stage=
|sample_disease=small cell cervical cancer
|sample_donor(cell lot)=
|sample_ethnicity=J
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.43953649737964e-280!GO:0043226;organelle;1.65181956103034e-242!GO:0043229;intracellular organelle;5.48324473537692e-242!GO:0043227;membrane-bound organelle;6.82957240459411e-238!GO:0043231;intracellular membrane-bound organelle;6.82957240459411e-238!GO:0005737;cytoplasm;9.76327799772403e-177!GO:0044422;organelle part;1.34149476431427e-174!GO:0044446;intracellular organelle part;4.41645047004792e-173!GO:0044444;cytoplasmic part;3.71806559272619e-128!GO:0032991;macromolecular complex;1.2727253167241e-112!GO:0005634;nucleus;2.53160933569485e-104!GO:0044237;cellular metabolic process;1.03141865642343e-96!GO:0044238;primary metabolic process;5.10275916525888e-95!GO:0043170;macromolecule metabolic process;4.81857737800621e-87!GO:0030529;ribonucleoprotein complex;3.46720951094081e-84!GO:0044428;nuclear part;8.1114899310104e-81!GO:0005739;mitochondrion;2.70104275840599e-73!GO:0043233;organelle lumen;1.33025146263447e-72!GO:0031974;membrane-enclosed lumen;1.33025146263447e-72!GO:0003723;RNA binding;3.92150534873277e-71!GO:0043283;biopolymer metabolic process;1.07514394132863e-60!GO:0043234;protein complex;1.74406478630469e-60!GO:0005515;protein binding;2.41302608051639e-59!GO:0031090;organelle membrane;1.86409821969234e-57!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.06646646848703e-56!GO:0044429;mitochondrial part;3.01995361601021e-53!GO:0006396;RNA processing;8.99246021917492e-50!GO:0016043;cellular component organization and biogenesis;1.70050073581851e-49!GO:0010467;gene expression;2.07954636881766e-49!GO:0031967;organelle envelope;2.27164029201597e-49!GO:0031975;envelope;3.4875138212746e-49!GO:0005840;ribosome;2.40014132756084e-48!GO:0031981;nuclear lumen;3.16541408418716e-44!GO:0003735;structural constituent of ribosome;3.60911293923767e-42!GO:0043228;non-membrane-bound organelle;3.60911293923767e-42!GO:0043232;intracellular non-membrane-bound organelle;3.60911293923767e-42!GO:0006259;DNA metabolic process;2.15924078223394e-41!GO:0006996;organelle organization and biogenesis;4.26453294692714e-41!GO:0016071;mRNA metabolic process;9.10525306267056e-41!GO:0006412;translation;5.20187389694047e-40!GO:0015031;protein transport;5.5432197218486e-40!GO:0033036;macromolecule localization;1.51755034492936e-39!GO:0019538;protein metabolic process;3.34213433248612e-38!GO:0033279;ribosomal subunit;1.61955908231477e-37!GO:0009058;biosynthetic process;2.4657190935767e-37!GO:0008380;RNA splicing;8.98653287437863e-37!GO:0045184;establishment of protein localization;6.21467700387308e-36!GO:0008104;protein localization;7.75136626069251e-36!GO:0003676;nucleic acid binding;1.41569598835952e-35!GO:0006397;mRNA processing;1.87268049131794e-35!GO:0044267;cellular protein metabolic process;1.61505508084565e-34!GO:0046907;intracellular transport;1.96699223363602e-34!GO:0044249;cellular biosynthetic process;2.4112641870232e-34!GO:0005740;mitochondrial envelope;3.35255816060008e-34!GO:0044260;cellular macromolecule metabolic process;5.6972792852742e-34!GO:0065003;macromolecular complex assembly;1.14417534499125e-33!GO:0019866;organelle inner membrane;1.8267719036509e-33!GO:0007049;cell cycle;3.28939514622619e-33!GO:0031966;mitochondrial membrane;5.96790227219511e-33!GO:0005743;mitochondrial inner membrane;4.6229405296126e-31!GO:0005829;cytosol;5.27234293798499e-30!GO:0022607;cellular component assembly;7.54073201934229e-30!GO:0009059;macromolecule biosynthetic process;9.19403476481428e-30!GO:0005654;nucleoplasm;1.0597245312028e-28!GO:0051649;establishment of cellular localization;3.49617122480005e-28!GO:0005694;chromosome;4.77026676153889e-28!GO:0000166;nucleotide binding;5.96124306256944e-28!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.07230599299735e-27!GO:0051641;cellular localization;2.04359901558448e-27!GO:0016070;RNA metabolic process;1.41032327268678e-26!GO:0005681;spliceosome;1.41483613488361e-25!GO:0006119;oxidative phosphorylation;3.70976489954061e-25!GO:0044427;chromosomal part;3.81317153091252e-25!GO:0006886;intracellular protein transport;6.47833385196192e-25!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.2318588213063e-25!GO:0012505;endomembrane system;7.57644748144332e-25!GO:0006974;response to DNA damage stimulus;5.75008335101731e-24!GO:0000278;mitotic cell cycle;5.75008335101731e-24!GO:0044451;nucleoplasm part;5.92077625121475e-24!GO:0022402;cell cycle process;1.71107006207695e-23!GO:0044455;mitochondrial membrane part;1.80219597766669e-23!GO:0031980;mitochondrial lumen;5.34461093903136e-22!GO:0005759;mitochondrial matrix;5.34461093903136e-22!GO:0051276;chromosome organization and biogenesis;1.986208973519e-21!GO:0006281;DNA repair;2.67884530540393e-21!GO:0022403;cell cycle phase;2.8298961466622e-21!GO:0016462;pyrophosphatase activity;7.83370550514408e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;8.59941576089914e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;1.1884570078909e-20!GO:0044445;cytosolic part;1.30042075791198e-20!GO:0017111;nucleoside-triphosphatase activity;1.95624364394919e-20!GO:0032553;ribonucleotide binding;2.74821138514975e-20!GO:0032555;purine ribonucleotide binding;2.74821138514975e-20!GO:0006512;ubiquitin cycle;4.12120713848514e-20!GO:0015934;large ribosomal subunit;1.62228649016139e-19!GO:0000087;M phase of mitotic cell cycle;3.22364471922865e-19!GO:0005746;mitochondrial respiratory chain;3.22364471922865e-19!GO:0015935;small ribosomal subunit;3.75170661394278e-19!GO:0051301;cell division;4.99899635641488e-19!GO:0007067;mitosis;1.00787645598278e-18!GO:0017076;purine nucleotide binding;1.1366061854663e-18!GO:0005524;ATP binding;1.66877880344699e-18!GO:0032559;adenyl ribonucleotide binding;3.70737753090761e-18!GO:0006260;DNA replication;8.51137078560917e-18!GO:0016874;ligase activity;1.04212884736303e-17!GO:0006457;protein folding;1.31068632650416e-17!GO:0050136;NADH dehydrogenase (quinone) activity;1.65628152105668e-17!GO:0003954;NADH dehydrogenase activity;1.65628152105668e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.65628152105668e-17!GO:0000279;M phase;1.98820655315889e-17!GO:0022618;protein-RNA complex assembly;4.10621914662923e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.43564301956637e-17!GO:0006325;establishment and/or maintenance of chromatin architecture;6.93436485277546e-17!GO:0030554;adenyl nucleotide binding;2.60424110762338e-16!GO:0006323;DNA packaging;5.49466022021362e-16!GO:0005635;nuclear envelope;8.5033485362337e-16!GO:0044265;cellular macromolecule catabolic process;9.09033324226785e-16!GO:0031965;nuclear membrane;1.33610536428593e-15!GO:0015630;microtubule cytoskeleton;1.33759057423237e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.61402091161465e-15!GO:0019941;modification-dependent protein catabolic process;2.61606848343e-15!GO:0043632;modification-dependent macromolecule catabolic process;2.61606848343e-15!GO:0042775;organelle ATP synthesis coupled electron transport;2.83956397163149e-15!GO:0042773;ATP synthesis coupled electron transport;2.83956397163149e-15!GO:0006511;ubiquitin-dependent protein catabolic process;2.91145260191113e-15!GO:0030964;NADH dehydrogenase complex (quinone);2.98895315610332e-15!GO:0045271;respiratory chain complex I;2.98895315610332e-15!GO:0005747;mitochondrial respiratory chain complex I;2.98895315610332e-15!GO:0005761;mitochondrial ribosome;3.01133935049384e-15!GO:0000313;organellar ribosome;3.01133935049384e-15!GO:0043412;biopolymer modification;3.34415398868089e-15!GO:0044257;cellular protein catabolic process;5.3082075916255e-15!GO:0005794;Golgi apparatus;6.55869566037253e-15!GO:0016887;ATPase activity;6.55869566037253e-15!GO:0009719;response to endogenous stimulus;8.96526368894001e-15!GO:0008135;translation factor activity, nucleic acid binding;9.39630853214978e-15!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.4098570988343e-15!GO:0016192;vesicle-mediated transport;1.19186641283663e-14!GO:0005730;nucleolus;1.62967693550518e-14!GO:0044453;nuclear membrane part;1.79703200571227e-14!GO:0051186;cofactor metabolic process;2.13014184466321e-14!GO:0044432;endoplasmic reticulum part;2.98625015404059e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.53624939617761e-14!GO:0000502;proteasome complex (sensu Eukaryota);6.4184063078911e-14!GO:0042623;ATPase activity, coupled;8.03872687262235e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;8.8504514007032e-14!GO:0000375;RNA splicing, via transesterification reactions;8.8504514007032e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.8504514007032e-14!GO:0005783;endoplasmic reticulum;9.93062779014698e-14!GO:0043285;biopolymer catabolic process;1.19783162599775e-13!GO:0051082;unfolded protein binding;1.46298787947296e-13!GO:0000785;chromatin;2.27435514750305e-13!GO:0006464;protein modification process;2.87600811751026e-13!GO:0006333;chromatin assembly or disassembly;4.10259284299506e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.58768217327286e-13!GO:0009057;macromolecule catabolic process;6.34754145351096e-13!GO:0005643;nuclear pore;7.18855924542791e-13!GO:0044248;cellular catabolic process;8.11723069497239e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.12526047441202e-12!GO:0048193;Golgi vesicle transport;1.70343181422738e-12!GO:0016604;nuclear body;3.33049068090871e-12!GO:0043687;post-translational protein modification;3.72951456289943e-12!GO:0030163;protein catabolic process;3.80642763855401e-12!GO:0065004;protein-DNA complex assembly;4.20210580235285e-12!GO:0009055;electron carrier activity;5.88202473975099e-12!GO:0006605;protein targeting;7.14232394061381e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.7196033694413e-12!GO:0048770;pigment granule;1.00253515870977e-11!GO:0042470;melanosome;1.00253515870977e-11!GO:0006403;RNA localization;1.06925225485378e-11!GO:0006732;coenzyme metabolic process;1.07161351471972e-11!GO:0008134;transcription factor binding;1.22050248897095e-11!GO:0050657;nucleic acid transport;1.28417685003788e-11!GO:0051236;establishment of RNA localization;1.28417685003788e-11!GO:0050658;RNA transport;1.28417685003788e-11!GO:0042254;ribosome biogenesis and assembly;1.47534573719894e-11!GO:0005789;endoplasmic reticulum membrane;1.81416536193004e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.16692936710975e-11!GO:0008565;protein transporter activity;7.10175724912698e-11!GO:0003743;translation initiation factor activity;7.3163942669613e-11!GO:0000775;chromosome, pericentric region;1.0449700207328e-10!GO:0065002;intracellular protein transport across a membrane;1.72786213059354e-10!GO:0046930;pore complex;2.58349453470709e-10!GO:0006413;translational initiation;2.70924621357516e-10!GO:0004386;helicase activity;3.19708443481925e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.21442717256808e-10!GO:0009259;ribonucleotide metabolic process;4.51155021972669e-10!GO:0008639;small protein conjugating enzyme activity;5.1528878374299e-10!GO:0006334;nucleosome assembly;7.27572577743403e-10!GO:0016607;nuclear speck;8.20862021515082e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.36025067883299e-10!GO:0031497;chromatin assembly;8.47871683365519e-10!GO:0006163;purine nucleotide metabolic process;1.00458721070928e-09!GO:0004842;ubiquitin-protein ligase activity;1.1120863737237e-09!GO:0006261;DNA-dependent DNA replication;1.16207114330404e-09!GO:0016568;chromatin modification;1.4012107421748e-09!GO:0051028;mRNA transport;1.40938612152289e-09!GO:0006446;regulation of translational initiation;1.41501058210148e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.66813840800703e-09!GO:0019829;cation-transporting ATPase activity;1.66959862726793e-09!GO:0019787;small conjugating protein ligase activity;2.86524759195769e-09!GO:0015986;ATP synthesis coupled proton transport;3.0549283823423e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.0549283823423e-09!GO:0030532;small nuclear ribonucleoprotein complex;3.26125346310907e-09!GO:0009060;aerobic respiration;3.67183816954252e-09!GO:0009141;nucleoside triphosphate metabolic process;4.91516624205092e-09!GO:0051726;regulation of cell cycle;5.59171999673063e-09!GO:0008026;ATP-dependent helicase activity;5.69411606172415e-09!GO:0051188;cofactor biosynthetic process;6.18650419714251e-09!GO:0006461;protein complex assembly;6.22273815691816e-09!GO:0005819;spindle;7.83957974009912e-09!GO:0006164;purine nucleotide biosynthetic process;8.49232419353843e-09!GO:0009199;ribonucleoside triphosphate metabolic process;9.58454802766531e-09!GO:0045333;cellular respiration;9.8938383263945e-09!GO:0006913;nucleocytoplasmic transport;1.09110568203241e-08!GO:0009150;purine ribonucleotide metabolic process;1.18364627288679e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.18512308222773e-08!GO:0000074;regulation of progression through cell cycle;1.23650749144143e-08!GO:0005874;microtubule;1.34835360266972e-08!GO:0009260;ribonucleotide biosynthetic process;1.48266051745522e-08!GO:0006364;rRNA processing;1.66689147282182e-08!GO:0031982;vesicle;1.71057448400519e-08!GO:0044431;Golgi apparatus part;1.76798974392088e-08!GO:0046034;ATP metabolic process;1.79314231052187e-08!GO:0006399;tRNA metabolic process;1.82012003712263e-08!GO:0003697;single-stranded DNA binding;2.30298465170808e-08!GO:0016881;acid-amino acid ligase activity;2.597086693944e-08!GO:0051169;nuclear transport;2.7050741866462e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.72183037656808e-08!GO:0009144;purine nucleoside triphosphate metabolic process;2.72183037656808e-08!GO:0005813;centrosome;3.03257754278447e-08!GO:0031410;cytoplasmic vesicle;3.16627516674201e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.66374557612912e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.66374557612912e-08!GO:0016072;rRNA metabolic process;3.79790916014228e-08!GO:0016740;transferase activity;4.64324815470483e-08!GO:0007005;mitochondrion organization and biogenesis;4.72729306359342e-08!GO:0006752;group transfer coenzyme metabolic process;4.94604991340256e-08!GO:0006754;ATP biosynthetic process;4.97922293527213e-08!GO:0006753;nucleoside phosphate metabolic process;4.97922293527213e-08!GO:0016779;nucleotidyltransferase activity;5.2972194966168e-08!GO:0032446;protein modification by small protein conjugation;5.30463256907105e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.07925804259033e-08!GO:0006793;phosphorus metabolic process;6.27288827771855e-08!GO:0006796;phosphate metabolic process;6.27288827771855e-08!GO:0016772;transferase activity, transferring phosphorus-containing groups;6.43184150230304e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.87746694498672e-08!GO:0009152;purine ribonucleotide biosynthetic process;9.48928685864563e-08!GO:0043566;structure-specific DNA binding;9.6276882195588e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.07716476827119e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.07716476827119e-07!GO:0005815;microtubule organizing center;1.09817840321555e-07!GO:0016567;protein ubiquitination;1.35173040925441e-07!GO:0009108;coenzyme biosynthetic process;1.4408347734906e-07!GO:0045045;secretory pathway;1.49294335413207e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.6949467181406e-07!GO:0006099;tricarboxylic acid cycle;1.84571367918205e-07!GO:0046356;acetyl-CoA catabolic process;1.84571367918205e-07!GO:0031988;membrane-bound vesicle;2.00568917000428e-07!GO:0019222;regulation of metabolic process;2.29166844079339e-07!GO:0006366;transcription from RNA polymerase II promoter;2.46861491355453e-07!GO:0016023;cytoplasmic membrane-bound vesicle;2.90967216493067e-07!GO:0005657;replication fork;2.91830430108632e-07!GO:0051325;interphase;3.21590279934167e-07!GO:0005793;ER-Golgi intermediate compartment;3.39126097029826e-07!GO:0006084;acetyl-CoA metabolic process;3.42413370193864e-07!GO:0009056;catabolic process;4.90087554740535e-07!GO:0043623;cellular protein complex assembly;4.93127143122017e-07!GO:0045259;proton-transporting ATP synthase complex;5.0274699222906e-07!GO:0051329;interphase of mitotic cell cycle;5.03187043395925e-07!GO:0048475;coated membrane;5.46795520266075e-07!GO:0030117;membrane coat;5.46795520266075e-07!GO:0003712;transcription cofactor activity;5.50186435542248e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.69076793194898e-07!GO:0015631;tubulin binding;5.94207249817326e-07!GO:0008094;DNA-dependent ATPase activity;6.32766195561241e-07!GO:0000151;ubiquitin ligase complex;7.87627558307606e-07!GO:0005667;transcription factor complex;8.03049799393903e-07!GO:0009117;nucleotide metabolic process;1.01333972898743e-06!GO:0009109;coenzyme catabolic process;1.16751916140171e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.26426372074473e-06!GO:0007051;spindle organization and biogenesis;1.35949862550586e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.4643376412081e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.4643376412081e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.4643376412081e-06!GO:0007017;microtubule-based process;1.49489950372454e-06!GO:0000245;spliceosome assembly;1.5025343799597e-06!GO:0000075;cell cycle checkpoint;1.50546683542282e-06!GO:0000139;Golgi membrane;2.05520343694282e-06!GO:0051168;nuclear export;2.15329646197026e-06!GO:0005762;mitochondrial large ribosomal subunit;2.3635982932568e-06!GO:0000315;organellar large ribosomal subunit;2.3635982932568e-06!GO:0050794;regulation of cellular process;3.14515474599835e-06!GO:0043038;amino acid activation;3.61195526666924e-06!GO:0006418;tRNA aminoacylation for protein translation;3.61195526666924e-06!GO:0043039;tRNA aminoacylation;3.61195526666924e-06!GO:0006350;transcription;4.83890133589514e-06!GO:0008654;phospholipid biosynthetic process;5.13851552338664e-06!GO:0051187;cofactor catabolic process;5.66735342877328e-06!GO:0016310;phosphorylation;5.9925669198651e-06!GO:0003899;DNA-directed RNA polymerase activity;6.23477755834947e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.56572182208013e-06!GO:0003729;mRNA binding;1.18462885551299e-05!GO:0000776;kinetochore;1.38199819607008e-05!GO:0030120;vesicle coat;1.48602163815822e-05!GO:0030662;coated vesicle membrane;1.48602163815822e-05!GO:0016126;sterol biosynthetic process;1.55833631997768e-05!GO:0005768;endosome;1.62280957912366e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.6407071475876e-05!GO:0017038;protein import;2.05698590607828e-05!GO:0000786;nucleosome;2.50333057624486e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;2.57367067201107e-05!GO:0006613;cotranslational protein targeting to membrane;2.86631282060043e-05!GO:0006302;double-strand break repair;3.10504378857257e-05!GO:0003682;chromatin binding;3.23485491437997e-05!GO:0008610;lipid biosynthetic process;3.6189052354292e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;3.76670658135573e-05!GO:0007010;cytoskeleton organization and biogenesis;3.92530256918051e-05!GO:0031323;regulation of cellular metabolic process;4.02608246680864e-05!GO:0004674;protein serine/threonine kinase activity;4.19019817848609e-05!GO:0000314;organellar small ribosomal subunit;4.88556680710419e-05!GO:0005763;mitochondrial small ribosomal subunit;4.88556680710419e-05!GO:0043021;ribonucleoprotein binding;6.43497963553219e-05!GO:0003724;RNA helicase activity;6.66604181832275e-05!GO:0005839;proteasome core complex (sensu Eukaryota);7.53780191697818e-05!GO:0046467;membrane lipid biosynthetic process;9.5616128289847e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000101349446248666!GO:0008017;microtubule binding;0.000103604544987561!GO:0007059;chromosome segregation;0.000112899063649051!GO:0000059;protein import into nucleus, docking;0.000121486989369566!GO:0006839;mitochondrial transport;0.000124664966195!GO:0016363;nuclear matrix;0.00013074341736486!GO:0005798;Golgi-associated vesicle;0.000137230468066118!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000141167054523736!GO:0031124;mRNA 3'-end processing;0.000146984678416725!GO:0032940;secretion by cell;0.000164715480003679!GO:0009892;negative regulation of metabolic process;0.000168941525324927!GO:0006695;cholesterol biosynthetic process;0.000173102084304289!GO:0032774;RNA biosynthetic process;0.000175952953281312!GO:0051427;hormone receptor binding;0.000180819009319653!GO:0010468;regulation of gene expression;0.00019301828425874!GO:0016787;hydrolase activity;0.000197394423057856!GO:0003684;damaged DNA binding;0.000219565214960811!GO:0006383;transcription from RNA polymerase III promoter;0.000222904392073031!GO:0004298;threonine endopeptidase activity;0.000223012225338332!GO:0006351;transcription, DNA-dependent;0.00022462377272512!GO:0003677;DNA binding;0.000230263027681291!GO:0043681;protein import into mitochondrion;0.000233050511715802!GO:0031252;leading edge;0.000249744277306064!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000252391424071301!GO:0009165;nucleotide biosynthetic process;0.000256368184552442!GO:0004576;oligosaccharyl transferase activity;0.000259725293548911!GO:0044440;endosomal part;0.00026394976353789!GO:0010008;endosome membrane;0.00026394976353789!GO:0016491;oxidoreductase activity;0.000265932070898585!GO:0006612;protein targeting to membrane;0.000272251674463962!GO:0031324;negative regulation of cellular metabolic process;0.000273799216356506!GO:0046474;glycerophospholipid biosynthetic process;0.000296805457993903!GO:0006818;hydrogen transport;0.000296941556742354!GO:0008250;oligosaccharyl transferase complex;0.000311548941904575!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000336640635954958!GO:0015399;primary active transmembrane transporter activity;0.000336640635954958!GO:0005905;coated pit;0.00034081275824011!GO:0015992;proton transport;0.000343131810581302!GO:0035257;nuclear hormone receptor binding;0.000345028810713626!GO:0051246;regulation of protein metabolic process;0.000355781193790762!GO:0003924;GTPase activity;0.000365242719664995!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000383432752739817!GO:0008092;cytoskeletal protein binding;0.000394245503866179!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000422742355901537!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000446752784837084!GO:0000228;nuclear chromosome;0.000450142344723472!GO:0051052;regulation of DNA metabolic process;0.00046886258857645!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000495442499383089!GO:0005876;spindle microtubule;0.000515223312107215!GO:0046489;phosphoinositide biosynthetic process;0.00051604796403647!GO:0006611;protein export from nucleus;0.000520145848827607!GO:0005770;late endosome;0.000520768929056231!GO:0016859;cis-trans isomerase activity;0.000551900381541513!GO:0012501;programmed cell death;0.000582359748010385!GO:0005525;GTP binding;0.000621451691745129!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000624113118213852!GO:0019867;outer membrane;0.000664762544107165!GO:0003690;double-stranded DNA binding;0.000689297467466912!GO:0006915;apoptosis;0.000696442539676776!GO:0030867;rough endoplasmic reticulum membrane;0.000702387810827581!GO:0006405;RNA export from nucleus;0.000718819375496587!GO:0003678;DNA helicase activity;0.000750781657587571!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000754803618725531!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000754803618725531!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000754803618725531!GO:0045454;cell redox homeostasis;0.000762616199236493!GO:0015980;energy derivation by oxidation of organic compounds;0.000803113610518136!GO:0050789;regulation of biological process;0.000867010977620513!GO:0016853;isomerase activity;0.000868469097890491!GO:0030880;RNA polymerase complex;0.00086945008566662!GO:0031968;organelle outer membrane;0.000888070396825226!GO:0008186;RNA-dependent ATPase activity;0.000931042170877283!GO:0007006;mitochondrial membrane organization and biogenesis;0.000940298812973691!GO:0005684;U2-dependent spliceosome;0.000960718652874779!GO:0031123;RNA 3'-end processing;0.000961240505707494!GO:0051920;peroxiredoxin activity;0.000961240505707494!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000972608883083632!GO:0022890;inorganic cation transmembrane transporter activity;0.000974225664940969!GO:0006626;protein targeting to mitochondrion;0.00106476010431467!GO:0006270;DNA replication initiation;0.00107473140978744!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00108195372687553!GO:0015002;heme-copper terminal oxidase activity;0.00108195372687553!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00108195372687553!GO:0004129;cytochrome-c oxidase activity;0.00108195372687553!GO:0005741;mitochondrial outer membrane;0.00108195372687553!GO:0003713;transcription coactivator activity;0.0011008836455724!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00112152355722414!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00112152355722414!GO:0006091;generation of precursor metabolites and energy;0.00120689015766935!GO:0016311;dephosphorylation;0.00120689015766935!GO:0045449;regulation of transcription;0.00120689015766935!GO:0030118;clathrin coat;0.00121258235406129!GO:0004527;exonuclease activity;0.0012218111141231!GO:0006378;mRNA polyadenylation;0.0012218111141231!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00126109213562264!GO:0005875;microtubule associated complex;0.00128135082662263!GO:0032508;DNA duplex unwinding;0.00128772748875673!GO:0032392;DNA geometric change;0.00128772748875673!GO:0043596;nuclear replication fork;0.00130551898288915!GO:0000287;magnesium ion binding;0.00132797136364002!GO:0016564;transcription repressor activity;0.0013709647306637!GO:0018196;peptidyl-asparagine modification;0.00138201173852223!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00138201173852223!GO:0006352;transcription initiation;0.00150872289281363!GO:0007052;mitotic spindle organization and biogenesis;0.00150872289281363!GO:0005788;endoplasmic reticulum lumen;0.00154994135689383!GO:0048487;beta-tubulin binding;0.00167017668939709!GO:0019899;enzyme binding;0.00175762086722294!GO:0000082;G1/S transition of mitotic cell cycle;0.00176667948058227!GO:0006338;chromatin remodeling;0.00176667948058227!GO:0005885;Arp2/3 protein complex;0.00182700666703289!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00188369868245989!GO:0000428;DNA-directed RNA polymerase complex;0.00188369868245989!GO:0016251;general RNA polymerase II transcription factor activity;0.00188454041342719!GO:0006268;DNA unwinding during replication;0.00189990195842024!GO:0007093;mitotic cell cycle checkpoint;0.00190210718712463!GO:0008033;tRNA processing;0.00193423558131448!GO:0004722;protein serine/threonine phosphatase activity;0.0019949411099775!GO:0005637;nuclear inner membrane;0.0019949411099775!GO:0045786;negative regulation of progression through cell cycle;0.00201688909603455!GO:0006310;DNA recombination;0.00202662236406972!GO:0030176;integral to endoplasmic reticulum membrane;0.0020310226556452!GO:0048500;signal recognition particle;0.00203889146547491!GO:0008287;protein serine/threonine phosphatase complex;0.00221406055037685!GO:0031072;heat shock protein binding;0.00222119066227674!GO:0051170;nuclear import;0.00229132894698209!GO:0008219;cell death;0.00232312780669406!GO:0016265;death;0.00232312780669406!GO:0048471;perinuclear region of cytoplasm;0.0023878263288638!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00244803713094441!GO:0043492;ATPase activity, coupled to movement of substances;0.0024619270045718!GO:0004004;ATP-dependent RNA helicase activity;0.00246605250991428!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00260612243154075!GO:0035258;steroid hormone receptor binding;0.0026465702687933!GO:0005773;vacuole;0.00272041577238664!GO:0016481;negative regulation of transcription;0.00276303767596174!GO:0030027;lamellipodium;0.00281660705251606!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00285879910407134!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00309525098962088!GO:0016301;kinase activity;0.00309525098962088!GO:0044452;nucleolar part;0.00316000755663453!GO:0016563;transcription activator activity;0.00325474120279116!GO:0008312;7S RNA binding;0.00327798760774459!GO:0033116;ER-Golgi intermediate compartment membrane;0.0033044149101687!GO:0030137;COPI-coated vesicle;0.00335620126501562!GO:0006650;glycerophospholipid metabolic process;0.00345356748640562!GO:0004721;phosphoprotein phosphatase activity;0.00348220226166529!GO:0003711;transcription elongation regulator activity;0.00356157907079121!GO:0006414;translational elongation;0.00361695359595391!GO:0030521;androgen receptor signaling pathway;0.00365787334031477!GO:0006505;GPI anchor metabolic process;0.00379119383051462!GO:0032259;methylation;0.00399151943637237!GO:0032561;guanyl ribonucleotide binding;0.00407043553405392!GO:0019001;guanyl nucleotide binding;0.00407043553405392!GO:0003746;translation elongation factor activity;0.00410943483227572!GO:0030135;coated vesicle;0.00417438969533624!GO:0006402;mRNA catabolic process;0.00426428239728129!GO:0016791;phosphoric monoester hydrolase activity;0.00438017168130412!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0044848428471708!GO:0045047;protein targeting to ER;0.0044848428471708!GO:0043414;biopolymer methylation;0.00455437523969765!GO:0007088;regulation of mitosis;0.00463089583320205!GO:0005769;early endosome;0.00467776248016408!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00478491240533716!GO:0051252;regulation of RNA metabolic process;0.00481192135232331!GO:0016741;transferase activity, transferring one-carbon groups;0.00483827917651015!GO:0042393;histone binding;0.00496122994016835!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0049729763275257!GO:0006497;protein amino acid lipidation;0.00509467869517624!GO:0005048;signal sequence binding;0.00515888859936633!GO:0006401;RNA catabolic process;0.0051840811245696!GO:0006606;protein import into nucleus;0.0052431383797266!GO:0006892;post-Golgi vesicle-mediated transport;0.00525759873832195!GO:0005669;transcription factor TFIID complex;0.00531979980313356!GO:0006506;GPI anchor biosynthetic process;0.00533412028329485!GO:0000922;spindle pole;0.00534427793963409!GO:0030384;phosphoinositide metabolic process;0.00534427793963409!GO:0003714;transcription corepressor activity;0.00535007707539781!GO:0016272;prefoldin complex;0.0054718165370524!GO:0000049;tRNA binding;0.0057113239698142!GO:0044454;nuclear chromosome part;0.00579596850246101!GO:0006355;regulation of transcription, DNA-dependent;0.00584367666713578!GO:0008168;methyltransferase activity;0.00599611940470601!GO:0030663;COPI coated vesicle membrane;0.00609183463207612!GO:0030126;COPI vesicle coat;0.00609183463207612!GO:0043601;nuclear replisome;0.00633978044499903!GO:0030894;replisome;0.00633978044499903!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00633978044499903!GO:0022406;membrane docking;0.00647179423463922!GO:0048278;vesicle docking;0.00647179423463922!GO:0051087;chaperone binding;0.00708034591253773!GO:0000725;recombinational repair;0.00722586561435443!GO:0000724;double-strand break repair via homologous recombination;0.00722586561435443!GO:0000819;sister chromatid segregation;0.00767235013604346!GO:0006643;membrane lipid metabolic process;0.0078124472184657!GO:0006144;purine base metabolic process;0.00801444523333275!GO:0006891;intra-Golgi vesicle-mediated transport;0.00802312223205463!GO:0005869;dynactin complex;0.00813216451390605!GO:0000339;RNA cap binding;0.00815027624315382!GO:0006595;polyamine metabolic process;0.00835621856818695!GO:0005832;chaperonin-containing T-complex;0.00837158253024045!GO:0000792;heterochromatin;0.00840535250516098!GO:0000070;mitotic sister chromatid segregation;0.00840535250516098!GO:0016584;nucleosome positioning;0.00879437845811566!GO:0006730;one-carbon compound metabolic process;0.00901726921640606!GO:0006470;protein amino acid dephosphorylation;0.00975731573734887!GO:0008139;nuclear localization sequence binding;0.0101932835190745!GO:0003702;RNA polymerase II transcription factor activity;0.0104374212964223!GO:0043069;negative regulation of programmed cell death;0.0104444743238296!GO:0042802;identical protein binding;0.0108082841065284!GO:0008180;signalosome;0.0108572637217655!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.010906431732276!GO:0043631;RNA polyadenylation;0.0109437592232086!GO:0008408;3'-5' exonuclease activity;0.0109760309358555!GO:0005791;rough endoplasmic reticulum;0.0109904020373909!GO:0048523;negative regulation of cellular process;0.0113440107224712!GO:0000726;non-recombinational repair;0.0115728941909731!GO:0042158;lipoprotein biosynthetic process;0.011609438343378!GO:0030145;manganese ion binding;0.0120735874552999!GO:0030133;transport vesicle;0.0121789459624122!GO:0016197;endosome transport;0.0128043761466228!GO:0006904;vesicle docking during exocytosis;0.0128732013572021!GO:0000178;exosome (RNase complex);0.0128732013572021!GO:0044433;cytoplasmic vesicle part;0.0130298447271102!GO:0006284;base-excision repair;0.0130578894116111!GO:0000323;lytic vacuole;0.0131474509252268!GO:0005764;lysosome;0.0131474509252268!GO:0051789;response to protein stimulus;0.0132418739952204!GO:0006986;response to unfolded protein;0.0132418739952204!GO:0043022;ribosome binding;0.0134139724515339!GO:0005663;DNA replication factor C complex;0.0137060305593013!GO:0004003;ATP-dependent DNA helicase activity;0.0139691602473312!GO:0043130;ubiquitin binding;0.0147687484647766!GO:0032182;small conjugating protein binding;0.0147687484647766!GO:0051128;regulation of cellular component organization and biogenesis;0.0148894571342597!GO:0043066;negative regulation of apoptosis;0.0151163561067626!GO:0000910;cytokinesis;0.0153662640408225!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0154746485022244!GO:0030119;AP-type membrane coat adaptor complex;0.0154746485022244!GO:0012506;vesicle membrane;0.0156789022264754!GO:0000118;histone deacetylase complex;0.0157089735912692!GO:0019783;small conjugating protein-specific protease activity;0.0157089735912692!GO:0009116;nucleoside metabolic process;0.0163889598923229!GO:0051287;NAD binding;0.0170034828385249!GO:0030518;steroid hormone receptor signaling pathway;0.017019908788375!GO:0031902;late endosome membrane;0.017469509856272!GO:0006916;anti-apoptosis;0.017985275967969!GO:0008276;protein methyltransferase activity;0.018120306223199!GO:0050178;phenylpyruvate tautomerase activity;0.0181638062598731!GO:0050681;androgen receptor binding;0.018240693615106!GO:0030658;transport vesicle membrane;0.0183714782632521!GO:0030131;clathrin adaptor complex;0.0189764405303207!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0190572441370515!GO:0006367;transcription initiation from RNA polymerase II promoter;0.019305812289373!GO:0007264;small GTPase mediated signal transduction;0.0198219140747009!GO:0006007;glucose catabolic process;0.0200307548595926!GO:0046483;heterocycle metabolic process;0.0201674372843922!GO:0007021;tubulin folding;0.0203000906585109!GO:0004532;exoribonuclease activity;0.0204385577066967!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0204385577066967!GO:0006289;nucleotide-excision repair;0.0206331919614697!GO:0005758;mitochondrial intermembrane space;0.0209542948267773!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0209821858609929!GO:0003730;mRNA 3'-UTR binding;0.0210574783218423!GO:0032984;macromolecular complex disassembly;0.021178540142165!GO:0031371;ubiquitin conjugating enzyme complex;0.0216844523963759!GO:0046128;purine ribonucleoside metabolic process;0.0221391281431491!GO:0042278;purine nucleoside metabolic process;0.0221391281431491!GO:0004843;ubiquitin-specific protease activity;0.0221785935683085!GO:0003727;single-stranded RNA binding;0.0224571230999614!GO:0031577;spindle checkpoint;0.0228714792376109!GO:0006275;regulation of DNA replication;0.0239140410586901!GO:0019206;nucleoside kinase activity;0.024290916435098!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0245332289289038!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0255051467212538!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0255347190292935!GO:0019843;rRNA binding;0.025684992941007!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0257652804207646!GO:0031970;organelle envelope lumen;0.0259015341793836!GO:0040029;regulation of gene expression, epigenetic;0.0259068260082645!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0259068260082645!GO:0004518;nuclease activity;0.0263235076746755!GO:0030496;midbody;0.0267447443563243!GO:0044450;microtubule organizing center part;0.0269520055986748!GO:0016125;sterol metabolic process;0.027224493888447!GO:0006541;glutamine metabolic process;0.0274058740863948!GO:0009066;aspartate family amino acid metabolic process;0.0274408745131493!GO:0051540;metal cluster binding;0.0280257715800995!GO:0051536;iron-sulfur cluster binding;0.0280257715800995!GO:0016044;membrane organization and biogenesis;0.0284530510146686!GO:0016585;chromatin remodeling complex;0.0286829261528796!GO:0006665;sphingolipid metabolic process;0.0286864094903777!GO:0043241;protein complex disassembly;0.0287158392648598!GO:0008536;Ran GTPase binding;0.028796075657219!GO:0004221;ubiquitin thiolesterase activity;0.0289054743247657!GO:0030659;cytoplasmic vesicle membrane;0.0294831050231561!GO:0017134;fibroblast growth factor binding;0.029903161754032!GO:0035267;NuA4 histone acetyltransferase complex;0.0301034059701153!GO:0008637;apoptotic mitochondrial changes;0.0302410720482986!GO:0031570;DNA integrity checkpoint;0.0306876288570966!GO:0005784;translocon complex;0.0312935187677339!GO:0008022;protein C-terminus binding;0.031502530581558!GO:0000152;nuclear ubiquitin ligase complex;0.0324317884350558!GO:0006376;mRNA splice site selection;0.0327529554950628!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0327529554950628!GO:0006672;ceramide metabolic process;0.0327551553422122!GO:0032200;telomere organization and biogenesis;0.0327551553422122!GO:0000723;telomere maintenance;0.0327551553422122!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0327551553422122!GO:0000793;condensed chromosome;0.0329175529648033!GO:0030660;Golgi-associated vesicle membrane;0.0329175529648033!GO:0043284;biopolymer biosynthetic process;0.0332071743411815!GO:0000096;sulfur amino acid metabolic process;0.0332651037213968!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0335683471332608!GO:0045039;protein import into mitochondrial inner membrane;0.0335683471332608!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0335683471332608!GO:0010257;NADH dehydrogenase complex assembly;0.0335683471332608!GO:0033108;mitochondrial respiratory chain complex assembly;0.0335683471332608!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0341125313291029!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0341271278694128!GO:0009112;nucleobase metabolic process;0.0341271278694128!GO:0043433;negative regulation of transcription factor activity;0.0348780020727886!GO:0031529;ruffle organization and biogenesis;0.0350883271564013!GO:0047485;protein N-terminus binding;0.0352614952211381!GO:0016579;protein deubiquitination;0.0354193317056322!GO:0030911;TPR domain binding;0.0355144979070967!GO:0042981;regulation of apoptosis;0.037018887561671!GO:0043624;cellular protein complex disassembly;0.0375553779579972!GO:0003923;GPI-anchor transamidase activity;0.0378628181544549!GO:0016255;attachment of GPI anchor to protein;0.0378628181544549!GO:0042765;GPI-anchor transamidase complex;0.0378628181544549!GO:0043067;regulation of programmed cell death;0.0381925400470219!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0382563296556735!GO:0055083;monovalent inorganic anion homeostasis;0.0382563296556735!GO:0055064;chloride ion homeostasis;0.0382563296556735!GO:0030644;cellular chloride ion homeostasis;0.0382563296556735!GO:0006354;RNA elongation;0.0382563296556735!GO:0044438;microbody part;0.0385715122382353!GO:0044439;peroxisomal part;0.0385715122382353!GO:0007004;telomere maintenance via telomerase;0.0385759689960063!GO:0051539;4 iron, 4 sulfur cluster binding;0.0386979687593191!GO:0016569;covalent chromatin modification;0.0387551530427223!GO:0031628;opioid receptor binding;0.0388050630864891!GO:0031852;mu-type opioid receptor binding;0.0388050630864891!GO:0030132;clathrin coat of coated pit;0.0388050630864891!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0388921614288902!GO:0000209;protein polyubiquitination;0.0391758751186911!GO:0051452;cellular pH reduction;0.0392198372585101!GO:0051453;regulation of cellular pH;0.0392198372585101!GO:0045851;pH reduction;0.0392198372585101!GO:0043189;H4/H2A histone acetyltransferase complex;0.0392198372585101!GO:0006406;mRNA export from nucleus;0.0395369547755902!GO:0007018;microtubule-based movement;0.03975104464832!GO:0042769;DNA damage response, detection of DNA damage;0.03975104464832!GO:0016790;thiolester hydrolase activity;0.039793423340352!GO:0004185;serine carboxypeptidase activity;0.0399342485744742!GO:0030134;ER to Golgi transport vesicle;0.0399342485744742!GO:0006220;pyrimidine nucleotide metabolic process;0.0399342485744742!GO:0043488;regulation of mRNA stability;0.0399342485744742!GO:0043487;regulation of RNA stability;0.0399342485744742!GO:0005652;nuclear lamina;0.0404358664356975!GO:0008538;proteasome activator activity;0.0405385885333237!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.040611647739036!GO:0004523;ribonuclease H activity;0.0409779317940133!GO:0030522;intracellular receptor-mediated signaling pathway;0.0412168397066196!GO:0016408;C-acyltransferase activity;0.0412712642321946!GO:0030742;GTP-dependent protein binding;0.0415375055899809!GO:0033170;DNA-protein loading ATPase activity;0.0430228005513815!GO:0003689;DNA clamp loader activity;0.0430228005513815!GO:0017130;poly(rC) binding;0.0431442553552135!GO:0051320;S phase;0.0437294724040426!GO:0007050;cell cycle arrest;0.0438058934392615!GO:0019238;cyclohydrolase activity;0.0438431064975186!GO:0051053;negative regulation of DNA metabolic process;0.0441547861344048!GO:0000731;DNA synthesis during DNA repair;0.0442026470658738!GO:0022411;cellular component disassembly;0.0442026470658738!GO:0007040;lysosome organization and biogenesis;0.0443003567552821!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0444632544312101!GO:0001832;blastocyst growth;0.0449285483466006!GO:0006301;postreplication repair;0.0449285483466006!GO:0000781;chromosome, telomeric region;0.0449903001687293!GO:0005871;kinesin complex;0.0452713815635976!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0457408095451685!GO:0000084;S phase of mitotic cell cycle;0.0465483476525823!GO:0030149;sphingolipid catabolic process;0.0467169687399058!GO:0045892;negative regulation of transcription, DNA-dependent;0.0468360985856772!GO:0042770;DNA damage response, signal transduction;0.0472292266073906!GO:0045936;negative regulation of phosphate metabolic process;0.0473831076060601!GO:0035035;histone acetyltransferase binding;0.0487393430211874!GO:0006516;glycoprotein catabolic process;0.0492813927763257!GO:0046519;sphingoid metabolic process;0.0493963256447702
|sample_id=10800
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=cervix
|top_motifs=SOX{8,9,10}:2.67140496793;BREu{core}:2.64330386909;TFDP1:2.53923686829;NFY{A,B,C}:2.47087395195;LMO2:2.33791059256;SNAI1..3:1.99993315932;NKX2-3_NKX2-5:1.98611150017;GFI1:1.97268602278;ZEB1:1.88942463557;E2F1..5:1.83634874443;PBX1:1.66478245738;FOXM1:1.64961779119;NRF1:1.6395351992;XCPE1{core}:1.61818090852;VSX1,2:1.57404760582;ELK1,4_GABP{A,B1}:1.48995501444;ZNF143:1.46440801678;T:1.37115257605;DBP:1.2952265449;SOX2:1.28707086289;POU1F1:1.22947464263;SOX17:1.21914486858;PRRX1,2:1.19969820358;FOXA2:1.18547200175;HOXA9_MEIS1:1.13023413521;FOXQ1:1.12697202121;ADNP_IRX_SIX_ZHX:1.12149011694;MTE{core}:1.08202272116;FOXL1:1.06641349131;HOX{A6,A7,B6,B7}:1.04435903459;ATF4:1.03443658771;POU6F1:1.00260028088;MYOD1:1.00185887378;FOX{F1,F2,J1}:0.999358383964;ZFP161:0.983268407663;HIC1:0.971980601086;ZIC1..3:0.945159822711;bHLH_family:0.94004374315;TFAP2B:0.928817378468;TEF:0.917861735873;NANOG:0.87371771951;PAX8:0.840095715132;EGR1..3:0.829218476673;PAX3,7:0.822698519967;MED-1{core}:0.775210489429;HOX{A4,D4}:0.767149778062;SP1:0.727366142933;OCT4_SOX2{dimer}:0.725714657229;ZNF384:0.72147498364;SREBF1,2:0.691916034461;LHX3,4:0.652864260791;POU2F1..3:0.645702557507;FOXP1:0.633580633723;ATF5_CREB3:0.601824059219;PATZ1:0.59942948769;PDX1:0.596235942536;PPARG:0.55141019175;RFX1:0.550077005341;JUN:0.531139545901;YY1:0.520137024733;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.514160359616;NKX3-1:0.486405125964;CREB1:0.475134465201;ARID5B:0.454061830794;POU5F1:0.431754340376;NR5A1,2:0.411222406397;REST:0.39062784572;HBP1_HMGB_SSRP1_UBTF:0.38846707517;PAX5:0.387654926727;ZNF423:0.372854093376;FOXD3:0.366058237397;MYB:0.329974100052;IKZF2:0.312775388519;LEF1_TCF7_TCF7L1,2:0.309362433246;NHLH1,2:0.238838841434;NKX6-1,2:0.234384892534;MTF1:0.229158583167;ONECUT1,2:0.227341482611;PITX1..3:0.186759474492;PAX4:0.185127067742;PAX6:0.173053214127;EN1,2:0.155101296239;EVI1:0.0997984587943;CUX2:0.0844510285779;PAX1,9:0.0813105922665;AHR_ARNT_ARNT2:0.0808587102969;STAT5{A,B}:0.05130320779;GATA6:0.0489544112163;FOXN1:-0.00993956789664;FOX{D1,D2}:-0.0434090882182;HNF1A:-0.0444294879226;ZBTB16:-0.0478920822389;NKX2-1,4:-0.0531792686741;TOPORS:-0.0574580942554;RBPJ:-0.0586518696898;FOX{I1,J2}:-0.0618149956084;CRX:-0.0645961902801;TBX4,5:-0.0730062238267;FOXP3:-0.0748739340167;MEF2{A,B,C,D}:-0.0775964353798;TGIF1:-0.0799814905359;HNF4A_NR2F1,2:-0.118238125358;AIRE:-0.130714549625;HAND1,2:-0.138703487977;ALX1:-0.149166017727;RFX2..5_RFXANK_RFXAP:-0.159497878413;NKX2-2,8:-0.163252019796;GATA4:-0.18998460393;MAZ:-0.207576901227;MZF1:-0.221473404399;TP53:-0.239987823848;ZBTB6:-0.241218943026;GTF2I:-0.244800693609;MYFfamily:-0.24597711659;ESR1:-0.277105055481;CDX1,2,4:-0.290119352812;FOXO1,3,4:-0.311795307157;ATF2:-0.324962007183;UFEwm:-0.33634259529;NKX3-2:-0.351648171318;GFI1B:-0.358648507748;SOX5:-0.378563354526;HOX{A5,B5}:-0.400686892875;AR:-0.433896247525;DMAP1_NCOR{1,2}_SMARC:-0.434493147451;FOSL2:-0.450160409586;SPIB:-0.452753221595;IKZF1:-0.476443674758;NFKB1_REL_RELA:-0.489539393897;BPTF:-0.523772051901;TFAP2{A,C}:-0.534322544682;RORA:-0.544530250028;HLF:-0.563832696438;SPI1:-0.565150493113;NR6A1:-0.569829774006;TBP:-0.602062576418;HES1:-0.625866890241;NFIX:-0.632639967693;FOS_FOS{B,L1}_JUN{B,D}:-0.637366170209;KLF4:-0.6454343905;CDC5L:-0.658442880088;MAFB:-0.679435474926;BACH2:-0.695794623349;STAT1,3:-0.696647363835;EP300:-0.709168064948;IRF7:-0.710591368188;HIF1A:-0.786081491432;RUNX1..3:-0.792690649746;NFE2L2:-0.794399738298;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.832801704169;PAX2:-0.847179559396;CEBPA,B_DDIT3:-0.856679454127;GTF2A1,2:-0.857089246676;XBP1:-0.871844602807;NFIL3:-0.882799054871;MYBL2:-0.890503503009;ELF1,2,4:-0.902190246748;ATF6:-0.905232005904;ZNF148:-0.918281671128;NFE2L1:-0.920164938722;TAL1_TCF{3,4,12}:-0.936495353917;RREB1:-0.938308074785;TFCP2:-0.94340651918;HMGA1,2:-0.951554939299;ETS1,2:-0.957303954484;EBF1:-0.97011640747;NFE2:-0.973442642623;HMX1:-0.976739124415;NANOG{mouse}:-1.03645925038;PRDM1:-1.09060525466;NR3C1:-1.09291080378;SRF:-1.12842251494;ESRRA:-1.14171729742;POU3F1..4:-1.14477636549;HSF1,2:-1.1604404241;TFAP4:-1.18854119708;GCM1,2:-1.20044986229;TEAD1:-1.21992095601;ALX4:-1.22225129893;GZF1:-1.22362050297;NR1H4:-1.22683640135;TLX1..3_NFIC{dimer}:-1.24565309149;IRF1,2:-1.24641677067;NFATC1..3:-1.51289481132;STAT2,4,6:-1.54817938568;GLI1..3:-1.68048099351;TLX2:-1.69156938676;ZNF238:-1.70155330391;SMAD1..7,9:-1.73209262834;RXR{A,B,G}:-1.84381301906;SPZ1:-1.92066776537;RXRA_VDR{dimer}:-1.92689959449
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10800-110I8;search_select_hide=table117:FF:10800-110I8
}}
}}

Latest revision as of 15:05, 3 June 2020

Name:small cell cervical cancer cell line:HCSC-1
Species:Human (Homo sapiens)
Library ID:CNhs11885
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuecervix
dev stageNA
sexfemale
age48
cell typeunclassifiable
cell lineHCSC-1
companyJAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005366
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11885 CAGE DRX008004 DRR008876
Accession ID Hg19

Library idBAMCTSS
CNhs11885 DRZ000301 DRZ001686
Accession ID Hg38

Library idBAMCTSS
CNhs11885 DRZ011651 DRZ013036
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0818
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.579
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0329
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0528
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0484
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0192
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.648
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.167
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0913
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.0913
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.624
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.111
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital1.1
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11885

Jaspar motifP-value
MA0002.24.68161e-5
MA0003.10.152
MA0004.10.47
MA0006.10.653
MA0007.10.433
MA0009.10.583
MA0014.10.636
MA0017.10.0116
MA0018.20.00114
MA0019.10.861
MA0024.11.97879e-5
MA0025.10.101
MA0027.10.474
MA0028.10.132
MA0029.10.442
MA0030.10.69
MA0031.10.817
MA0035.20.718
MA0038.17.72198e-5
MA0039.20.493
MA0040.10.884
MA0041.10.584
MA0042.10.821
MA0043.10.00167
MA0046.10.615
MA0047.20.719
MA0048.10.607
MA0050.17.92616e-5
MA0051.10.00209
MA0052.10.564
MA0055.10.722
MA0057.10.395
MA0058.10.504
MA0059.10.829
MA0060.13.34785e-19
MA0061.10.0152
MA0062.20.0566
MA0065.20.0157
MA0066.10.0576
MA0067.10.711
MA0068.10.198
MA0069.10.469
MA0070.10.075
MA0071.10.379
MA0072.10.823
MA0073.10.619
MA0074.10.249
MA0076.10.0218
MA0077.10.0014
MA0078.10.329
MA0079.20.292
MA0080.24.42155e-9
MA0081.10.0748
MA0083.10.15
MA0084.10.401
MA0087.10.843
MA0088.10.681
MA0090.17.34431e-4
MA0091.10.0446
MA0092.10.144
MA0093.10.392
MA0099.26.16145e-12
MA0100.10.219
MA0101.10.137
MA0102.20.534
MA0103.10.0454
MA0104.20.475
MA0105.13.38587e-4
MA0106.10.304
MA0107.10.0717
MA0108.20.0347
MA0111.10.587
MA0112.21.79658e-5
MA0113.10.0105
MA0114.10.0826
MA0115.10.993
MA0116.10.00141
MA0117.10.787
MA0119.10.00927
MA0122.10.417
MA0124.10.998
MA0125.10.0495
MA0131.10.297
MA0135.10.172
MA0136.11.34336e-5
MA0137.20.0274
MA0138.20.861
MA0139.10.3
MA0140.10.618
MA0141.10.126
MA0142.10.326
MA0143.10.888
MA0144.10.0379
MA0145.10.137
MA0146.10.0725
MA0147.10.685
MA0148.10.705
MA0149.10.139
MA0150.10.00179
MA0152.10.916
MA0153.10.371
MA0154.10.00443
MA0155.10.221
MA0156.10.0976
MA0157.10.365
MA0159.10.0607
MA0160.10.147
MA0162.10.203
MA0163.16.36912e-6
MA0164.10.52
MA0258.10.00657
MA0259.10.563



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11885

Novel motifP-value
10.166
100.194
1000.989
1010.288
1020.504
1030.0632
1040.583
1050.615
1060.0168
1070.131
1080.909
1090.223
110.13
1100.229
1110.274
1120.0495
1130.299
1140.0139
1150.624
1160.591
1170.152
1180.454
1190.19
120.963
1200.637
1210.876
1220.52
1230.511
1240.367
1250.627
1260.525
1270.148
1280.136
1290.563
130.101
1300.812
1310.387
1320.623
1330.0249
1340.751
1350.00171
1360.197
1370.28
1380.171
1390.0558
140.617
1400.187
1410.76
1420.631
1430.0128
1440.516
1450.175
1460.669
1470.692
1480.118
1490.0183
150.188
1500.576
1510.289
1520.116
1530.245
1540.684
1550.628
1560.767
1570.674
1580.561
1590.617
160.253
1600.12
1610.199
1620.97
1630.663
1640.343
1650.462
1660.168
1670.86
1680.0792
1690.00453
170.158
180.101
190.0843
20.5
200.592
210.186
220.0999
230.00964
240.122
250.77
260.208
270.276
280.807
290.342
30.0518
300.646
310.635
320.0217
330.549
340.264
350.173
360.134
370.113
380.193
390.226
40.887
400.416
410.519
420.184
430.0997
440.354
450.444
460.172
470.373
480.287
490.171
50.13
500.388
510.141
520.226
530.375
540.215
550.0476
560.507
570.292
580.243
590.0328
60.445
600.0233
610.382
620.0772
630.0717
640.602
650.0429
660.163
670.862
680.571
690.743
70.296
700.00444
710.104
720.189
730.152
740.133
750.15
760.709
770.126
780.358
790.117
80.155
800.0428
810.178
820.00936
830.254
840.835
850.00344
860.305
870.518
880.702
890.132
90.15
900.0373
910.18
920.0886
930.0928
940.175
950.457
960.0766
970.742
980.4
990.493



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11885


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
120 (female reproductive organ cancer)
4362 (cervical cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000002 (uterine cervix)
0000995 (uterus)
0003134 (female reproductive organ)
0001560 (neck of organ)
0005156 (reproductive structure)
0000064 (organ part)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0101967 (cervical cancer cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)

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