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{{f5samples
 
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
+
|DRA_sample_Accession=CAGE@SAMD00004835
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000451,CL:0000548,CL:0000557,CL:0000566,CL:0000723,CL:0000738,CL:0000763,CL:0000784,CL:0000837,CL:0000840,CL:0000988,CL:0000990,CL:0001012,CL:0001019,CL:0001029,CL:0002009,CL:0002031,CL:0002032,CL:0002320,CL:0002371
+
|accession_numbers=CAGE;DRX008215;DRR009087;DRZ000512;DRZ001897;DRZ011862;DRZ013247
 +
|ancestors_in_anatomy_facet=
 +
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0000990,CL:0000255,CL:0000451,CL:0000840,CL:0000784
 
|ancestors_in_disease_facet=
 
|ancestors_in_disease_facet=
 +
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000044,FF:0000045
 
|comment=
 
|comment=
 
|created_by=
 
|created_by=
 
|creation_date=
 
|creation_date=
 +
|data_phase=2
 +
|datafreeze_phase=2
 
|def=
 
|def=
|
+
|expression_enrichment_score=
 
|fonse_cell_line=
 
|fonse_cell_line=
 
|fonse_cell_line_closure=
 
|fonse_cell_line_closure=
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|fonse_treatment_closure=
 
|fonse_treatment_closure=
 
|has_quality=
 
|has_quality=
 +
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor1.CNhs10857.11228-116C4.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor1.CNhs10857.11228-116C4.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor1.CNhs10857.11228-116C4.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor1.CNhs10857.11228-116C4.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor1.CNhs10857.11228-116C4.hg38.nobarcode.ctss.bed.gz
 
|id=FF:11228-116C4
 
|id=FF:11228-116C4
|is_a=EFO:0002091;;FF:0000002;;FF:0000044;;FF:0000045;;FF:0000210
+
|is_a=EFO:0002091;;FF:0000044;;FF:0000045
 +
|is_obsolete=
 +
|library_id=CNhs10857
 +
|library_id_phase_based=2:CNhs10857
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11228
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11228
 
|name=Dendritic Cells - plasmacytoid, donor1
 
|name=Dendritic Cells - plasmacytoid, donor1
 
|namespace=FANTOM5
 
|namespace=FANTOM5
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|profile_cagescan=,,,
 
|profile_cagescan=,,,
 
|profile_hcage=CNhs10857,LSID702,release008,COMPLETED
 
|profile_hcage=CNhs10857,LSID702,release008,COMPLETED
|profile_rnaseq=,,,
+
|profile_rnaseq=
 
|profile_srnaseq=,,,
 
|profile_srnaseq=,,,
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 +
|repeat_enrich_byfamily=0,0.092892723212638,0,0,0,0,0,0.0740655716194148,0,0.259807298178319,-0.022747575020888,0,0,0,0,0,0,0,0,0,0.898518299841143,0,0,0,0.137593213616662,0,0,0,0.1171918008529,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0.16937498165142,0,0,0,0,0.323447914735708,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,-0.0407437791410989,0,-0.0969923612426051,0,0.16937498165142,-0.00445090400045901,0,0.092892723212638,0,0,0,0,0,0,0.092892723212638,0,0.857378108946766,0,0,0.234383601705801,0,0,0,0.0563989686599092,0.046446361606319,0,0,0,0,0,-0.419961550160724,0,0,0,0.0342087479208432,0.140634850192312,0,0,0.046446361606319,0,0.287739557767127,-0.0537897099751855,0,0,0,0,0,0.145458111982544,0,0,0,0,0,0,0,0,0,0.16937498165142,0,-0.096373593922461,0,0,0,0.173371633664486,0.323052989406804,0,0,0,0,0,0
 +
|repeat_enrich_byname=0,0,0,0,0.287739557767127,0,0,0.092892723212638,0,0,0,0,0,0,0,0,-0.247178875285564,0,0.304665615340451,0.090868459182329,0,0.234383601705801,-0.120867133414661,0,0.16937498165142,0,0,0.703664505776362,0,0.586799617330174,0.586799617330174,0,-0.128119866952565,0,0.042480171623323,0,0,0,0,0,-0.0710886291926064,0,-0.127811699543191,-0.0683442610773682,0,0,0,0,-0.0150880204268444,0,-0.120879483793741,0.380863032034239,0,-0.520341323317425,0.473834147085343,0,0,0,-0.265921247692823,-0.222721747346484,0,0,0.425762087390869,-0.0641578177077585,0,0,-0.391044581551635,0,0.201954013038746,-0.155975327169615,0,-0.0168213390612558,0,0,0.290916223965089,0,0,0,0,0,0,0,0,0.106144695637783,0.285835310310851,-0.0213941016300489,0,0,-0.0350523971604761,-0.0760016946163962,0,0,-0.373286155956567,-0.350736013296859,0.0372582704476426,-0.31137127365698,0,0.525223443977914,-0.00473886505177259,0.616151325024357,-0.240696796712261,-0.147401849371139,-0.0970889963372094,0,-0.371197782235585,-0.173448722124192,0.268809761081909,-0.12357815052051,-0.0127280028290641,-0.997024906581304,0.21952258726278,0,0,-0.0775089264793031,-0.33872453933796,0,0.0219554738891179,-0.149184398313233,0.119918532008947,-0.67098743647571,-0.351273181225945,-0.55122821730723,0.0777956375834774,-0.0395325284566706,-0.364543729683957,0,-0.276114212921155,-0.154223412155224,0,-0.00859368673798433,-0.0763894660237259,0.556257324742002,0.397058878119857,0,0.239710584873915,-0.0683442610773682,0.31868825601222,-0.487518520421772,0.148521050875416,0,-0.0223826377430286,0.16405169947216,0,0,0.00423032022760705,0,0,-0.0906379864633904,0.0978843689942723,0.230727638802112,0,0.0212426131802401,0,0.1646779476177,0,-0.0320156501334589,0.144906326507695,0,0.367981205258968,0,-0.191640622413023,0.0820899651443462,-0.0720979731263648,-0.422394805391737,0.0344458964008127,1.01471495509895,0.352074953526631,-0.117999610352378,-0.448009548626686,0,-0.0881268324752877,-0.107632623077519,-0.419961550160724,-0.215914931263868,0,-0.583529904229572,0,-0.336198348375702,0,0.0457204717723516,0,0.343799212654347,-0.154658842468406,0.432239595544005,-0.071345984062059,0,0.497579753757269,-0.695238214561336,0,-0.163706807157734,0,0,0.379179560531886,-0.697695966512583,-0.018762973362172,-0.0925430950728756,0,-0.790080158389657,0,0,-0.247296836362598,0.150298871240445,0,0.18624217812374,0.30220607182749,0.0563989686599092,-0.0230783502222961,0,0,-0.645700337992725,0,0,0.636013014059205,-0.10404736226088,0.822868089549975,0.694606610536696,-0.075630386882117,-0.108622809454255,0,0,0.286055434392481,0.529546643866525,0.0308404138789998,0,0,-0.203434934992505,-0.116628112990133,0,0.145458111982544,0,0,0,0,0,0,0,0,0,0.057142487150005,-0.0139030140529078,0,0.343921839485837,0,0,0,0,0,0,0,0,-1.20655592981484,-0.220713861677505,-0.0301246924637823,0,0,0.131133852432029,0,-0.122830679340837,0.223182685804746,0.16937498165142,0.294556541401838,0,0,0,0,0.148242611916589,0,0.290916223965089,0.046446361606319,0,0.0351622661589739,0.190948679396884,0.16937498165142,0,0,-0.107579419950371,0,0,0,0,0.110953618271389,0,0,-0.46255519173496,0,-0.264978514868373,0.0877931021045783,0,0.061721753628716,-0.206033429646188,-1.21672761743582,0,0,0.0295690921752019,0,0,0.0061035045911908,0,0,-0.00091381080448117,0,0,0.1171918008529,0,0,0.092892723212638,-0.214314512399756,0.131133852432029,0,0,0,0,0,0,0,0,0,0,0.0147231561098062,-0.0922240566585104,0,0,0,0,0,0,0,-0.0241060230789031,-0.116241681885257,0,0,0,0,0,0.092892723212638,0,0,-0.0450066917637725,0,0,0,0,0,-0.0969923612426051,0,0.16937498165142,0,0,-0.138387873254414,0,0,0.30943748513666,0,0,0,0,0,0,0,0,0,0.092892723212638,0,0,0,0.303100161864022,0.259807298178319,0,0.092892723212638,0,0,0,0,0,0.188749902151566,0,0.092892723212638,0,0,-0.0209916504963392,0,0,0,-0.104796384789156,0,0.0740655716194148,0,0.092892723212638,0,0,0,0,0.1171918008529,0.092892723212638,0,0,0,0,0,0,0,0,0.092892723212638,0.046446361606319,0,0,0,-0.49925296142127,-0.0247755787802223,0,-0.0538368135706024,0,0,-0.0397408981306245,0,0,0,0,0,0.216911519688089,0.053347066797183,0,0,0,0,0,0,0,0,0,0.42641924789947,0,0,0,0,0,0,0,0.086810294093196,0,0,0,0.127729356763019,0.08468749082571,0,0,0.0674121911692161,0,0,0,0,0,0,0,-0.0979578962680575,0,0,0.659962504967118,0,0,0,0,0,0,-0.24153047905039,-0.283220399823148,-0.10205079373997,0,0,0,0.177406027696373,0,0,0,0,-0.0667773874189013,0,0,0.234383601705801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137593213616662,0,0,0,0,0,0,0.248908044618349,0,0,0,0,0,0,0.046446361606319,0,0,0,0,0,0,0,0,0,0,0,0.234383601705801,0,0.61282390698982,0.046446361606319,0,0.1171918008529,0,0,0,0.092892723212638,0.243563582052711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.092892723212638,0.0128742549439995,0,0,0,0.213333018242426,0,0,0,0,0,0,0,0,0.092892723212638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34093031616354,0,0,0,0,0,0.092892723212638,0,0.318259179734501,0,0,0,0,0,0,0,0,0,0.16937498165142,0,0,0,-0.0482220752390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|rna_box=116
 
|rna_box=116
 
|rna_catalog_number=3H100-72-5
 
|rna_catalog_number=3H100-72-5
Line 57: Line 79:
 
|rna_weight_ug=1
 
|rna_weight_ug=1
 
|sample_age=22
 
|sample_age=22
 +
|sample_category=primary cells
 
|sample_cell_catalog=N/A
 
|sample_cell_catalog=N/A
 
|sample_cell_line=
 
|sample_cell_line=
Line 69: Line 92:
 
|sample_ethnicity=C
 
|sample_ethnicity=C
 
|sample_experimental_condition=
 
|sample_experimental_condition=
 +
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.86425081020986e-207!GO:0043227;membrane-bound organelle;4.22412294966486e-186!GO:0043231;intracellular membrane-bound organelle;6.27016312479582e-186!GO:0043226;organelle;3.58799184093014e-173!GO:0043229;intracellular organelle;1.32523240088415e-172!GO:0005737;cytoplasm;2.07974290948697e-130!GO:0044422;organelle part;3.22947482754986e-108!GO:0044446;intracellular organelle part;1.20262366272136e-106!GO:0043170;macromolecule metabolic process;3.88297365394507e-95!GO:0044444;cytoplasmic part;4.80114851345418e-95!GO:0044237;cellular metabolic process;5.88357811163429e-93!GO:0044238;primary metabolic process;2.12325145404999e-92!GO:0005634;nucleus;5.17558877969686e-92!GO:0032991;macromolecular complex;1.16644059073632e-83!GO:0044428;nuclear part;3.44147841135122e-75!GO:0003723;RNA binding;9.93396937631639e-71!GO:0030529;ribonucleoprotein complex;1.11548729533739e-69!GO:0043283;biopolymer metabolic process;9.01167033935112e-67!GO:0005515;protein binding;1.16095576099946e-63!GO:0043233;organelle lumen;4.38906982729157e-62!GO:0031974;membrane-enclosed lumen;4.38906982729157e-62!GO:0010467;gene expression;9.46108454727542e-59!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.83156255349161e-53!GO:0006396;RNA processing;2.22774115851918e-49!GO:0019538;protein metabolic process;1.88071097294988e-48!GO:0031981;nuclear lumen;6.37429918411576e-46!GO:0006412;translation;8.45800640188324e-46!GO:0044267;cellular protein metabolic process;1.36186382631585e-45!GO:0044260;cellular macromolecule metabolic process;1.85142880204809e-44!GO:0016071;mRNA metabolic process;1.78519695646075e-43!GO:0043234;protein complex;2.34355011512358e-42!GO:0033036;macromolecule localization;2.55879459662003e-42!GO:0031090;organelle membrane;6.21794532677451e-42!GO:0015031;protein transport;6.25576167305407e-42!GO:0005739;mitochondrion;9.51986165169068e-41!GO:0045184;establishment of protein localization;1.16010086694278e-39!GO:0008380;RNA splicing;1.66413284403632e-38!GO:0008104;protein localization;1.98051613952995e-38!GO:0006397;mRNA processing;7.32835497723856e-37!GO:0003676;nucleic acid binding;1.69943184499723e-36!GO:0005840;ribosome;3.66180879297267e-36!GO:0009059;macromolecule biosynthetic process;1.19968737643445e-35!GO:0031967;organelle envelope;2.67722344966588e-33!GO:0016070;RNA metabolic process;4.68333999096075e-33!GO:0031975;envelope;5.71962514468903e-33!GO:0003735;structural constituent of ribosome;5.02515592034565e-31!GO:0016043;cellular component organization and biogenesis;4.14066536430877e-30!GO:0005829;cytosol;8.2480077972456e-30!GO:0044429;mitochondrial part;8.56570336203256e-30!GO:0005654;nucleoplasm;1.3556212508895e-29!GO:0009058;biosynthetic process;3.88171909429512e-29!GO:0033279;ribosomal subunit;6.3661580088217e-29!GO:0044249;cellular biosynthetic process;3.36418744636377e-28!GO:0006886;intracellular protein transport;4.91918623163976e-28!GO:0005681;spliceosome;5.28834495992398e-28!GO:0046907;intracellular transport;1.84452398234983e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.70911398244808e-26!GO:0065003;macromolecular complex assembly;7.23802754651685e-26!GO:0006259;DNA metabolic process;7.58912159861652e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.21098879212679e-26!GO:0044451;nucleoplasm part;4.3172613005532e-24!GO:0006512;ubiquitin cycle;1.09570831408813e-23!GO:0012501;programmed cell death;2.6312920407455e-22!GO:0006915;apoptosis;3.39909320658263e-22!GO:0044445;cytosolic part;3.48716342297448e-22!GO:0022607;cellular component assembly;5.51371675132689e-22!GO:0006996;organelle organization and biogenesis;2.75862384211565e-21!GO:0043412;biopolymer modification;2.97661796708805e-21!GO:0019866;organelle inner membrane;3.80251697380376e-21!GO:0044265;cellular macromolecule catabolic process;6.85618719884591e-21!GO:0008219;cell death;1.25209589563991e-20!GO:0016265;death;1.25209589563991e-20!GO:0005740;mitochondrial envelope;1.71812224530822e-20!GO:0000166;nucleotide binding;5.01106814474723e-20!GO:0006511;ubiquitin-dependent protein catabolic process;6.42315462337011e-20!GO:0051603;proteolysis involved in cellular protein catabolic process;6.50479618409285e-20!GO:0044257;cellular protein catabolic process;6.87557423290746e-20!GO:0019941;modification-dependent protein catabolic process;7.87809000520425e-20!GO:0043632;modification-dependent macromolecule catabolic process;7.87809000520425e-20!GO:0031966;mitochondrial membrane;1.06615910753961e-19!GO:0051649;establishment of cellular localization;1.4340401792725e-19!GO:0051641;cellular localization;1.7307003229562e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.61255886126506e-19!GO:0016462;pyrophosphatase activity;4.01488386655091e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;4.73003565644011e-19!GO:0006464;protein modification process;7.38801841605217e-19!GO:0043285;biopolymer catabolic process;1.76437816274966e-18!GO:0008134;transcription factor binding;1.76437816274966e-18!GO:0017111;nucleoside-triphosphatase activity;1.77756116197169e-18!GO:0005743;mitochondrial inner membrane;2.4090052030152e-18!GO:0006119;oxidative phosphorylation;4.09184812741425e-18!GO:0050794;regulation of cellular process;1.36242057209318e-17!GO:0043687;post-translational protein modification;1.88659567219035e-17!GO:0022618;protein-RNA complex assembly;2.89451845431555e-17!GO:0012505;endomembrane system;3.04411927889669e-17!GO:0016874;ligase activity;3.35974262762966e-17!GO:0016604;nuclear body;1.89541626139823e-16!GO:0005730;nucleolus;2.0727782194042e-16!GO:0044455;mitochondrial membrane part;3.64756962688984e-16!GO:0009057;macromolecule catabolic process;3.86743603880513e-16!GO:0048770;pigment granule;7.64222035888955e-16!GO:0042470;melanosome;7.64222035888955e-16!GO:0015934;large ribosomal subunit;1.86966149358305e-15!GO:0006605;protein targeting;4.4557616313602e-15!GO:0044248;cellular catabolic process;9.84875612720991e-15!GO:0030163;protein catabolic process;1.36037769713993e-14!GO:0016607;nuclear speck;1.91217851040056e-14!GO:0015935;small ribosomal subunit;2.02554641862268e-14!GO:0016192;vesicle-mediated transport;3.81475159990809e-14!GO:0032553;ribonucleotide binding;5.06608556823292e-14!GO:0032555;purine ribonucleotide binding;5.06608556823292e-14!GO:0042981;regulation of apoptosis;5.81759691712554e-14!GO:0019222;regulation of metabolic process;6.35660559030115e-14!GO:0043067;regulation of programmed cell death;8.86809128347955e-14!GO:0006974;response to DNA damage stimulus;1.00287428745715e-13!GO:0006457;protein folding;1.01832042248444e-13!GO:0008135;translation factor activity, nucleic acid binding;1.3129105425282e-13!GO:0006913;nucleocytoplasmic transport;2.06842945685906e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;2.5759545232886e-13!GO:0017076;purine nucleotide binding;2.74346924187095e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;3.91695677868613e-13!GO:0000375;RNA splicing, via transesterification reactions;3.91695677868613e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.91695677868613e-13!GO:0051169;nuclear transport;4.51558960032698e-13!GO:0005746;mitochondrial respiratory chain;6.06306207061634e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.31919896788935e-13!GO:0031965;nuclear membrane;7.15179064078857e-13!GO:0005635;nuclear envelope;7.30230673530398e-13!GO:0000502;proteasome complex (sensu Eukaryota);7.4446041733055e-13!GO:0043228;non-membrane-bound organelle;7.45017673721515e-13!GO:0043232;intracellular non-membrane-bound organelle;7.45017673721515e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.16389102309276e-13!GO:0016887;ATPase activity;1.03820570297087e-12!GO:0042623;ATPase activity, coupled;1.04752409084395e-12!GO:0051276;chromosome organization and biogenesis;1.24205560559007e-12!GO:0006323;DNA packaging;1.34859080283127e-12!GO:0005794;Golgi apparatus;1.38934220463144e-12!GO:0007049;cell cycle;1.85869754572007e-12!GO:0050789;regulation of biological process;2.22501893943348e-12!GO:0005524;ATP binding;2.24621424720524e-12!GO:0031323;regulation of cellular metabolic process;4.43185854313866e-12!GO:0032559;adenyl ribonucleotide binding;4.70934240819219e-12!GO:0044453;nuclear membrane part;5.19414777430845e-12!GO:0006793;phosphorus metabolic process;1.33194529091345e-11!GO:0006796;phosphate metabolic process;1.33194529091345e-11!GO:0050136;NADH dehydrogenase (quinone) activity;1.52202057941851e-11!GO:0003954;NADH dehydrogenase activity;1.52202057941851e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.52202057941851e-11!GO:0006281;DNA repair;1.54259990230528e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.94318529622127e-11!GO:0006446;regulation of translational initiation;2.14528439913214e-11!GO:0031980;mitochondrial lumen;2.14528439913214e-11!GO:0005759;mitochondrial matrix;2.14528439913214e-11!GO:0003712;transcription cofactor activity;3.52919942490676e-11!GO:0030554;adenyl nucleotide binding;3.86783584799873e-11!GO:0016568;chromatin modification;4.81826869212949e-11!GO:0006413;translational initiation;6.83975897639099e-11!GO:0048523;negative regulation of cellular process;9.52823314421257e-11!GO:0008639;small protein conjugating enzyme activity;1.14017855773632e-10!GO:0044432;endoplasmic reticulum part;1.2711316474667e-10!GO:0005783;endoplasmic reticulum;1.351031757611e-10!GO:0004842;ubiquitin-protein ligase activity;1.47554022472817e-10!GO:0042254;ribosome biogenesis and assembly;1.63372739135081e-10!GO:0005773;vacuole;2.86763709051782e-10!GO:0051246;regulation of protein metabolic process;3.01178210347845e-10!GO:0006403;RNA localization;3.3817637155593e-10!GO:0042775;organelle ATP synthesis coupled electron transport;3.49977179541298e-10!GO:0042773;ATP synthesis coupled electron transport;3.49977179541298e-10!GO:0010468;regulation of gene expression;3.56137085326632e-10!GO:0004386;helicase activity;3.61698323947187e-10!GO:0048193;Golgi vesicle transport;4.04377540934191e-10!GO:0050657;nucleic acid transport;4.36735835692636e-10!GO:0051236;establishment of RNA localization;4.36735835692636e-10!GO:0050658;RNA transport;4.36735835692636e-10!GO:0006366;transcription from RNA polymerase II promoter;4.94184448134455e-10!GO:0016310;phosphorylation;5.65894637328514e-10!GO:0051082;unfolded protein binding;5.89479017458855e-10!GO:0017038;protein import;7.53415931182756e-10!GO:0019787;small conjugating protein ligase activity;7.78519918562427e-10!GO:0030964;NADH dehydrogenase complex (quinone);8.11271852916161e-10!GO:0045271;respiratory chain complex I;8.11271852916161e-10!GO:0005747;mitochondrial respiratory chain complex I;8.11271852916161e-10!GO:0003743;translation initiation factor activity;9.11401953919573e-10!GO:0006350;transcription;1.04339773558662e-09!GO:0005768;endosome;1.20220775378559e-09!GO:0008026;ATP-dependent helicase activity;1.7221668778741e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.75640988797963e-09!GO:0000323;lytic vacuole;1.84935796208726e-09!GO:0005764;lysosome;1.84935796208726e-09!GO:0016787;hydrolase activity;2.88608858311189e-09!GO:0043069;negative regulation of programmed cell death;3.67080076384787e-09!GO:0005643;nuclear pore;4.65512317494036e-09!GO:0065007;biological regulation;5.07397243722298e-09!GO:0019829;cation-transporting ATPase activity;5.50281992982928e-09!GO:0043066;negative regulation of apoptosis;6.19548128936118e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.47817808132175e-09!GO:0048519;negative regulation of biological process;8.32974068409934e-09!GO:0005694;chromosome;9.44944228706934e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.19522261319213e-08!GO:0009719;response to endogenous stimulus;1.22056756056271e-08!GO:0003713;transcription coactivator activity;1.25884856954517e-08!GO:0065009;regulation of a molecular function;1.37241103575733e-08!GO:0007243;protein kinase cascade;1.69386365950234e-08!GO:0051028;mRNA transport;1.71145637625394e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.32685527542491e-08!GO:0031324;negative regulation of cellular metabolic process;2.3981020957724e-08!GO:0009259;ribonucleotide metabolic process;2.40819068038943e-08!GO:0065002;intracellular protein transport across a membrane;2.47926390838656e-08!GO:0008565;protein transporter activity;2.54850261511984e-08!GO:0005789;endoplasmic reticulum membrane;2.55386279801311e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.56747366772935e-08!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.74215081918283e-08!GO:0051726;regulation of cell cycle;2.90445490185865e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.79798887518444e-08!GO:0051186;cofactor metabolic process;3.91083279666971e-08!GO:0009056;catabolic process;3.91083279666971e-08!GO:0000074;regulation of progression through cell cycle;3.94634095243606e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.15678400645872e-08!GO:0022402;cell cycle process;4.93655288605002e-08!GO:0006417;regulation of translation;5.75234016191376e-08!GO:0016563;transcription activator activity;7.61325520013119e-08!GO:0065004;protein-DNA complex assembly;8.41535843076765e-08!GO:0016881;acid-amino acid ligase activity;8.83400267992388e-08!GO:0006163;purine nucleotide metabolic process;9.27924231479479e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.65250834573439e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.13194654982701e-07!GO:0051170;nuclear import;1.27010939911453e-07!GO:0005761;mitochondrial ribosome;1.3024679005786e-07!GO:0000313;organellar ribosome;1.3024679005786e-07!GO:0009150;purine ribonucleotide metabolic process;1.31517351581772e-07!GO:0006606;protein import into nucleus;1.31517351581772e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.37360043315945e-07!GO:0032774;RNA biosynthetic process;1.43564926288201e-07!GO:0006351;transcription, DNA-dependent;1.59865168280334e-07!GO:0007242;intracellular signaling cascade;1.6509374368039e-07!GO:0005793;ER-Golgi intermediate compartment;1.75200308624641e-07!GO:0046930;pore complex;1.8121538170472e-07!GO:0015986;ATP synthesis coupled proton transport;1.8576881191543e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.8576881191543e-07!GO:0009260;ribonucleotide biosynthetic process;1.89394981119165e-07!GO:0006164;purine nucleotide biosynthetic process;2.02695172959442e-07!GO:0016072;rRNA metabolic process;2.30026879095165e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.37012362218895e-07!GO:0006732;coenzyme metabolic process;2.67115021294983e-07!GO:0030532;small nuclear ribonucleoprotein complex;2.73886613842195e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.75026438688376e-07!GO:0006333;chromatin assembly or disassembly;3.06976890618646e-07!GO:0032446;protein modification by small protein conjugation;3.10299928626513e-07!GO:0006364;rRNA processing;3.57934439849567e-07!GO:0006916;anti-apoptosis;3.57934439849567e-07!GO:0045449;regulation of transcription;4.99139718930536e-07!GO:0016567;protein ubiquitination;4.99139718930536e-07!GO:0043566;structure-specific DNA binding;5.1229212212854e-07!GO:0006888;ER to Golgi vesicle-mediated transport;5.97368366700241e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.72014529421264e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.87730702203368e-07!GO:0009141;nucleoside triphosphate metabolic process;8.34056800947064e-07!GO:0003697;single-stranded DNA binding;8.38193460133952e-07!GO:0031326;regulation of cellular biosynthetic process;9.02273756726999e-07!GO:0009060;aerobic respiration;1.0294351389786e-06!GO:0044427;chromosomal part;1.09308519655287e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.10690342630276e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.10690342630276e-06!GO:0000151;ubiquitin ligase complex;1.14843811794597e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.25730524561851e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.29786052154338e-06!GO:0006399;tRNA metabolic process;1.3940638786935e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.40352180130638e-06!GO:0006754;ATP biosynthetic process;1.49158735887431e-06!GO:0006753;nucleoside phosphate metabolic process;1.49158735887431e-06!GO:0004298;threonine endopeptidase activity;1.60508448053254e-06!GO:0016740;transferase activity;1.88238870096976e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.92379926500771e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.92379926500771e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.13533621114819e-06!GO:0009144;purine nucleoside triphosphate metabolic process;2.13533621114819e-06!GO:0009892;negative regulation of metabolic process;2.20936547026911e-06!GO:0044440;endosomal part;2.30250952909213e-06!GO:0010008;endosome membrane;2.30250952909213e-06!GO:0000785;chromatin;2.30370326059165e-06!GO:0016481;negative regulation of transcription;2.41083754533299e-06!GO:0046034;ATP metabolic process;2.46447376173749e-06!GO:0019899;enzyme binding;2.46447376173749e-06!GO:0005770;late endosome;2.60162871329898e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.26050554678757e-06!GO:0005774;vacuolar membrane;4.1218323606747e-06!GO:0006401;RNA catabolic process;4.52652755215858e-06!GO:0006260;DNA replication;4.57039641628742e-06!GO:0045259;proton-transporting ATP synthase complex;4.6561184202758e-06!GO:0045786;negative regulation of progression through cell cycle;4.82647034737091e-06!GO:0006461;protein complex assembly;4.87621716588868e-06!GO:0009889;regulation of biosynthetic process;5.89741923092149e-06!GO:0007005;mitochondrion organization and biogenesis;6.01792678287217e-06!GO:0050790;regulation of catalytic activity;6.45049837357338e-06!GO:0016564;transcription repressor activity;6.65291200187773e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;8.10113305532323e-06!GO:0006355;regulation of transcription, DNA-dependent;8.67154462566112e-06!GO:0043065;positive regulation of apoptosis;9.09807778885867e-06!GO:0045333;cellular respiration;9.33600987450055e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.0629465623764e-05!GO:0015399;primary active transmembrane transporter activity;1.0629465623764e-05!GO:0006950;response to stress;1.10305797127144e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.19835532659933e-05!GO:0000245;spliceosome assembly;1.2053556859177e-05!GO:0005765;lysosomal membrane;1.2053556859177e-05!GO:0008270;zinc ion binding;1.20891557052648e-05!GO:0006613;cotranslational protein targeting to membrane;1.21839960368464e-05!GO:0009055;electron carrier activity;1.2378854525145e-05!GO:0003724;RNA helicase activity;1.25525935269047e-05!GO:0048475;coated membrane;1.27663179548024e-05!GO:0030117;membrane coat;1.27663179548024e-05!GO:0043068;positive regulation of programmed cell death;1.35777957124388e-05!GO:0030120;vesicle coat;1.4248694606907e-05!GO:0030662;coated vesicle membrane;1.4248694606907e-05!GO:0044437;vacuolar part;1.67893248738487e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.89434556881001e-05!GO:0009615;response to virus;2.00089566755042e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.12792260731896e-05!GO:0003924;GTPase activity;2.20831499671075e-05!GO:0008234;cysteine-type peptidase activity;2.29103843370398e-05!GO:0051168;nuclear export;2.83539150719468e-05!GO:0006099;tricarboxylic acid cycle;3.02537150721494e-05!GO:0046356;acetyl-CoA catabolic process;3.02537150721494e-05!GO:0044431;Golgi apparatus part;3.32661088331275e-05!GO:0006402;mRNA catabolic process;4.49627666353981e-05!GO:0008654;phospholipid biosynthetic process;4.49627666353981e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;4.9109140934518e-05!GO:0031982;vesicle;5.74804779178399e-05!GO:0016779;nucleotidyltransferase activity;6.82216361565674e-05!GO:0006352;transcription initiation;7.16557339169996e-05!GO:0008047;enzyme activator activity;7.30096480596513e-05!GO:0051188;cofactor biosynthetic process;7.40132064078597e-05!GO:0006917;induction of apoptosis;7.4462641031966e-05!GO:0007264;small GTPase mediated signal transduction;7.78948671859048e-05!GO:0009117;nucleotide metabolic process;7.83479493271548e-05!GO:0006084;acetyl-CoA metabolic process;8.72917336529962e-05!GO:0016363;nuclear matrix;0.000110737860984578!GO:0012502;induction of programmed cell death;0.000112222566347475!GO:0048522;positive regulation of cellular process;0.000113055235313143!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000118923856147829!GO:0004812;aminoacyl-tRNA ligase activity;0.000118923856147829!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000118923856147829!GO:0003729;mRNA binding;0.000119697832571415!GO:0003677;DNA binding;0.000155599952590097!GO:0000278;mitotic cell cycle;0.000162876768284093!GO:0006752;group transfer coenzyme metabolic process;0.000169444944916393!GO:0031410;cytoplasmic vesicle;0.00017108462426005!GO:0005813;centrosome;0.000172006052195501!GO:0043492;ATPase activity, coupled to movement of substances;0.000185087437843793!GO:0006261;DNA-dependent DNA replication;0.000195932361543636!GO:0008632;apoptotic program;0.000215267058349876!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000216107842087425!GO:0009108;coenzyme biosynthetic process;0.000218935121429053!GO:0009109;coenzyme catabolic process;0.000248133378701647!GO:0005885;Arp2/3 protein complex;0.000248431746429409!GO:0043038;amino acid activation;0.000255359204510832!GO:0006418;tRNA aminoacylation for protein translation;0.000255359204510832!GO:0043039;tRNA aminoacylation;0.000255359204510832!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000266213318769095!GO:0008186;RNA-dependent ATPase activity;0.000281913055160141!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000284885087328063!GO:0006612;protein targeting to membrane;0.000319959234082678!GO:0005667;transcription factor complex;0.000331698155444848!GO:0005815;microtubule organizing center;0.000363530511887204!GO:0004674;protein serine/threonine kinase activity;0.000367638731760934!GO:0005798;Golgi-associated vesicle;0.00042037121935515!GO:0046914;transition metal ion binding;0.00042824123907036!GO:0002376;immune system process;0.000430486951517401!GO:0051427;hormone receptor binding;0.000451154759434769!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000505359253848963!GO:0043021;ribonucleoprotein binding;0.000560865471293361!GO:0016197;endosome transport;0.000592125263255777!GO:0005525;GTP binding;0.0005994032064218!GO:0016251;general RNA polymerase II transcription factor activity;0.000610527195890068!GO:0009967;positive regulation of signal transduction;0.000634023088269665!GO:0016044;membrane organization and biogenesis;0.000738644235027643!GO:0031072;heat shock protein binding;0.000752896786494586!GO:0035257;nuclear hormone receptor binding;0.000760455827078753!GO:0051336;regulation of hydrolase activity;0.000785734922940106!GO:0004004;ATP-dependent RNA helicase activity;0.000835444073115855!GO:0030176;integral to endoplasmic reticulum membrane;0.000841385266669999!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000863370850771261!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000871699641620207!GO:0031497;chromatin assembly;0.000875240889167072!GO:0006414;translational elongation;0.000900139456916613!GO:0003690;double-stranded DNA binding;0.00090551167267104!GO:0033116;ER-Golgi intermediate compartment membrane;0.000935701627097954!GO:0005769;early endosome;0.000954686001505409!GO:0051187;cofactor catabolic process;0.000956853820422656!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.000973949502950232!GO:0003714;transcription corepressor activity;0.000980702771995608!GO:0006334;nucleosome assembly;0.000998561590961965!GO:0005637;nuclear inner membrane;0.00104554392851893!GO:0030384;phosphoinositide metabolic process;0.00112760431674161!GO:0031988;membrane-bound vesicle;0.00116531372828768!GO:0043087;regulation of GTPase activity;0.00116898190434232!GO:0031902;late endosome membrane;0.0012577245589557!GO:0000139;Golgi membrane;0.00131607718157718!GO:0006818;hydrogen transport;0.00137064071255547!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00141152157209438!GO:0046489;phosphoinositide biosynthetic process;0.00145903368068916!GO:0046467;membrane lipid biosynthetic process;0.00161984269064732!GO:0046474;glycerophospholipid biosynthetic process;0.00164568681982597!GO:0007265;Ras protein signal transduction;0.00168154898002968!GO:0043623;cellular protein complex assembly;0.00170344578883701!GO:0009966;regulation of signal transduction;0.00174104024048598!GO:0060090;molecular adaptor activity;0.00175892269227599!GO:0045454;cell redox homeostasis;0.00176770028861893!GO:0042613;MHC class II protein complex;0.0018225364792211!GO:0015992;proton transport;0.00186690415240698!GO:0046966;thyroid hormone receptor binding;0.00187044271626366!GO:0007050;cell cycle arrest;0.00190975037032219!GO:0030433;ER-associated protein catabolic process;0.0019111436142378!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0019111436142378!GO:0006672;ceramide metabolic process;0.00201937397149504!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00203225719803608!GO:0003899;DNA-directed RNA polymerase activity;0.00209133010941433!GO:0005048;signal sequence binding;0.00218384222025236!GO:0016023;cytoplasmic membrane-bound vesicle;0.00222614223159951!GO:0043488;regulation of mRNA stability;0.00232839964836587!GO:0043487;regulation of RNA stability;0.00232839964836587!GO:0005096;GTPase activator activity;0.00237055429116555!GO:0030695;GTPase regulator activity;0.00241033495730081!GO:0051789;response to protein stimulus;0.00248028796881956!GO:0006986;response to unfolded protein;0.00248028796881956!GO:0004722;protein serine/threonine phosphatase activity;0.00253540889133941!GO:0051252;regulation of RNA metabolic process;0.00262665086197403!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00267634769585832!GO:0005762;mitochondrial large ribosomal subunit;0.00270372406384085!GO:0000315;organellar large ribosomal subunit;0.00270372406384085!GO:0016853;isomerase activity;0.00270553973999049!GO:0019783;small conjugating protein-specific protease activity;0.00272631085187103!GO:0045892;negative regulation of transcription, DNA-dependent;0.00277422068655229!GO:0005788;endoplasmic reticulum lumen;0.00277511563117304!GO:0046519;sphingoid metabolic process;0.00277511563117304!GO:0006650;glycerophospholipid metabolic process;0.00277511563117304!GO:0004518;nuclease activity;0.00286489361187516!GO:0030658;transport vesicle membrane;0.00291030088456944!GO:0007034;vacuolar transport;0.00305110413871194!GO:0009165;nucleotide biosynthetic process;0.00308310099052475!GO:0046822;regulation of nucleocytoplasmic transport;0.00308310099052475!GO:0031968;organelle outer membrane;0.00311929594797699!GO:0006611;protein export from nucleus;0.00313283721109889!GO:0003711;transcription elongation regulator activity;0.00315893476456879!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00327778405059734!GO:0008287;protein serine/threonine phosphatase complex;0.00347098477851328!GO:0006607;NLS-bearing substrate import into nucleus;0.00361331463145791!GO:0006310;DNA recombination;0.00361331463145791!GO:0030097;hemopoiesis;0.00361331463145791!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00361331463145791!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00361331463145791!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00361331463145791!GO:0048518;positive regulation of biological process;0.00362027410025131!GO:0003678;DNA helicase activity;0.00365288276582443!GO:0022415;viral reproductive process;0.00367474777926655!GO:0022890;inorganic cation transmembrane transporter activity;0.00371242454384339!GO:0006405;RNA export from nucleus;0.00379892422635925!GO:0006891;intra-Golgi vesicle-mediated transport;0.00379892422635925!GO:0032561;guanyl ribonucleotide binding;0.00381434366762006!GO:0019001;guanyl nucleotide binding;0.00381434366762006!GO:0019867;outer membrane;0.00385619888121162!GO:0032318;regulation of Ras GTPase activity;0.00387435467046674!GO:0004843;ubiquitin-specific protease activity;0.00395835323413954!GO:0004576;oligosaccharyl transferase activity;0.00411008199225694!GO:0051338;regulation of transferase activity;0.0042116689199751!GO:0032940;secretion by cell;0.00427631257818036!GO:0006383;transcription from RNA polymerase III promoter;0.00443269762362979!GO:0005684;U2-dependent spliceosome;0.00448221587190271!GO:0015631;tubulin binding;0.00451698894254605!GO:0005669;transcription factor TFIID complex;0.00457158465608071!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0046190177548126!GO:0031625;ubiquitin protein ligase binding;0.00465160133411465!GO:0017091;AU-rich element binding;0.00465160133411465!GO:0050779;RNA destabilization;0.00465160133411465!GO:0000289;poly(A) tail shortening;0.00465160133411465!GO:0045045;secretory pathway;0.00486162806128782!GO:0003725;double-stranded RNA binding;0.00495411269526057!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00519644535574154!GO:0048468;cell development;0.0052090986867954!GO:0006984;ER-nuclear signaling pathway;0.00548754019783386!GO:0043681;protein import into mitochondrion;0.00548754019783386!GO:0004197;cysteine-type endopeptidase activity;0.00578669583596287!GO:0006338;chromatin remodeling;0.00585001761374892!GO:0043549;regulation of kinase activity;0.00606558730231957!GO:0048500;signal recognition particle;0.00637705206821035!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00640761832854296!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00640761832854296!GO:0051329;interphase of mitotic cell cycle;0.0066247438081047!GO:0008033;tRNA processing;0.00667338032254754!GO:0000118;histone deacetylase complex;0.00669481488863543!GO:0008250;oligosaccharyl transferase complex;0.00680776360129014!GO:0030258;lipid modification;0.00682107133685776!GO:0018193;peptidyl-amino acid modification;0.00692064567658771!GO:0051223;regulation of protein transport;0.00700373258161384!GO:0016584;nucleosome positioning;0.00713707192505908!GO:0016301;kinase activity;0.00732060431643056!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00736146218314874!GO:0031252;leading edge;0.00736607903610598!GO:0004221;ubiquitin thiolesterase activity;0.00746489732460264!GO:0030660;Golgi-associated vesicle membrane;0.00746651319798459!GO:0051090;regulation of transcription factor activity;0.00785629376428948!GO:0043022;ribosome binding;0.00789714945029877!GO:0044452;nucleolar part;0.00801477337750075!GO:0004527;exonuclease activity;0.00811987089535548!GO:0002757;immune response-activating signal transduction;0.00827397485879646!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00829823467171016!GO:0006368;RNA elongation from RNA polymerase II promoter;0.00836993671111719!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00843052143068258!GO:0045047;protein targeting to ER;0.00843052143068258!GO:0051325;interphase;0.0085053903729704!GO:0006595;polyamine metabolic process;0.00866978345381585!GO:0016859;cis-trans isomerase activity;0.00872539190379232!GO:0045859;regulation of protein kinase activity;0.00875528972992615!GO:0005083;small GTPase regulator activity;0.00880937619481091!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00910215585979669!GO:0004177;aminopeptidase activity;0.00917054546948756!GO:0015923;mannosidase activity;0.00917054546948756!GO:0030127;COPII vesicle coat;0.0092136327226482!GO:0012507;ER to Golgi transport vesicle membrane;0.0092136327226482!GO:0022403;cell cycle phase;0.00926463855641601!GO:0000082;G1/S transition of mitotic cell cycle;0.00931133360220675!GO:0006643;membrane lipid metabolic process;0.00934759596423526!GO:0008168;methyltransferase activity;0.00936921534544402!GO:0005741;mitochondrial outer membrane;0.00943376911171549!GO:0048471;perinuclear region of cytoplasm;0.00943449107576106!GO:0047485;protein N-terminus binding;0.00963469092838213!GO:0030521;androgen receptor signaling pathway;0.0098499181550333!GO:0007006;mitochondrial membrane organization and biogenesis;0.0100858499166687!GO:0016741;transferase activity, transferring one-carbon groups;0.0100972407851405!GO:0003746;translation elongation factor activity;0.0100972407851405!GO:0008139;nuclear localization sequence binding;0.0106393975045072!GO:0016311;dephosphorylation;0.0106913317741307!GO:0030518;steroid hormone receptor signaling pathway;0.0107738331339288!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.0108041603938275!GO:0004667;prostaglandin-D synthase activity;0.0108041603938275!GO:0050802;circadian sleep/wake cycle, sleep;0.0108041603938275!GO:0022410;circadian sleep/wake cycle process;0.0108041603938275!GO:0042749;regulation of circadian sleep/wake cycle;0.0108041603938275!GO:0030880;RNA polymerase complex;0.0110698260845868!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0111744686921262!GO:0006354;RNA elongation;0.0112193134288369!GO:0008312;7S RNA binding;0.0113460695931443!GO:0003682;chromatin binding;0.0113818166805954!GO:0045947;negative regulation of translational initiation;0.0117568551667479!GO:0005070;SH3/SH2 adaptor activity;0.0120425926311917!GO:0006302;double-strand break repair;0.0122876230917065!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0123760466711794!GO:0000287;magnesium ion binding;0.0129674949606764!GO:0016788;hydrolase activity, acting on ester bonds;0.013028776928038!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0132332875158011!GO:0030134;ER to Golgi transport vesicle;0.0132701346827496!GO:0006468;protein amino acid phosphorylation;0.0134554642235422!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.013632084163692!GO:0051059;NF-kappaB binding;0.0136463748460154!GO:0006897;endocytosis;0.0136776424503539!GO:0010324;membrane invagination;0.0136776424503539!GO:0051052;regulation of DNA metabolic process;0.0137368159528398!GO:0007040;lysosome organization and biogenesis;0.0138907309142581!GO:0007041;lysosomal transport;0.0139611764747143!GO:0006516;glycoprotein catabolic process;0.014040567716781!GO:0016790;thiolester hydrolase activity;0.0141838116933962!GO:0005869;dynactin complex;0.0141838116933962!GO:0045321;leukocyte activation;0.0142115994166552!GO:0005057;receptor signaling protein activity;0.0142683415550895!GO:0009893;positive regulation of metabolic process;0.0145804170161351!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0145920271355872!GO:0018196;peptidyl-asparagine modification;0.0145920271355872!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0145920271355872!GO:0005099;Ras GTPase activator activity;0.0149863513914413!GO:0001667;ameboidal cell migration;0.0152006827464346!GO:0032027;myosin light chain binding;0.0152006827464346!GO:0002764;immune response-regulating signal transduction;0.0153369927580424!GO:0042802;identical protein binding;0.0155713489441444!GO:0031901;early endosome membrane;0.0157314930613202!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0157898656230136!GO:0000428;DNA-directed RNA polymerase complex;0.0157898656230136!GO:0006376;mRNA splice site selection;0.0160913588811968!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0160913588811968!GO:0030118;clathrin coat;0.0160913588811968!GO:0045368;positive regulation of interleukin-13 biosynthetic process;0.0162323974520413!GO:0045366;regulation of interleukin-13 biosynthetic process;0.0162323974520413!GO:0030867;rough endoplasmic reticulum membrane;0.0163176831158521!GO:0003684;damaged DNA binding;0.016739179760515!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.017428343301256!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0174759245493352!GO:0006626;protein targeting to mitochondrion;0.0178135561679084!GO:0048487;beta-tubulin binding;0.0186124572647954!GO:0016791;phosphoric monoester hydrolase activity;0.0188258172158001!GO:0005791;rough endoplasmic reticulum;0.0193420166795363!GO:0030041;actin filament polymerization;0.0193420166795363!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0195210401395756!GO:0051348;negative regulation of transferase activity;0.0195458054974486!GO:0008637;apoptotic mitochondrial changes;0.0195458054974486!GO:0016272;prefoldin complex;0.0195735429477533!GO:0043506;regulation of JNK activity;0.0208334495346738!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0212294167344652!GO:0030968;unfolded protein response;0.0214239184750223!GO:0006506;GPI anchor biosynthetic process;0.0217403944596109!GO:0032507;maintenance of cellular protein localization;0.0228673092248006!GO:0030522;intracellular receptor-mediated signaling pathway;0.0228673092248006!GO:0022411;cellular component disassembly;0.0231784298630287!GO:0045941;positive regulation of transcription;0.0235248771606506!GO:0006904;vesicle docking during exocytosis;0.0237057767372915!GO:0048534;hemopoietic or lymphoid organ development;0.024149305857826!GO:0022406;membrane docking;0.0241866216084207!GO:0048278;vesicle docking;0.0241866216084207!GO:0006955;immune response;0.0243038713795013!GO:0007033;vacuole organization and biogenesis;0.0243555561620163!GO:0051235;maintenance of localization;0.0243555561620163!GO:0006839;mitochondrial transport;0.0244852351918685!GO:0004278;granzyme B activity;0.0247076077742216!GO:0008276;protein methyltransferase activity;0.0247076077742216!GO:0045893;positive regulation of transcription, DNA-dependent;0.0247076077742216!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0247385691549091!GO:0051092;activation of NF-kappaB transcription factor;0.0250236407790702!GO:0033673;negative regulation of kinase activity;0.0250921320017837!GO:0006469;negative regulation of protein kinase activity;0.0250921320017837!GO:0002521;leukocyte differentiation;0.0250921320017837!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0250921320017837!GO:0015002;heme-copper terminal oxidase activity;0.0250921320017837!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0250921320017837!GO:0004129;cytochrome-c oxidase activity;0.0250921320017837!GO:0030663;COPI coated vesicle membrane;0.0251909993988844!GO:0030126;COPI vesicle coat;0.0251909993988844!GO:0032200;telomere organization and biogenesis;0.0254599151142966!GO:0000723;telomere maintenance;0.0254599151142966!GO:0043414;biopolymer methylation;0.0259576710755667!GO:0004402;histone acetyltransferase activity;0.0260085053834445!GO:0004468;lysine N-acetyltransferase activity;0.0260085053834445!GO:0030036;actin cytoskeleton organization and biogenesis;0.0261544341861027!GO:0019058;viral infectious cycle;0.0263896666076295!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0266465943068472!GO:0046649;lymphocyte activation;0.0266744681678077!GO:0002520;immune system development;0.0279405024315931!GO:0006644;phospholipid metabolic process;0.0279489349076467!GO:0000314;organellar small ribosomal subunit;0.0281538711172086!GO:0005763;mitochondrial small ribosomal subunit;0.0281538711172086!GO:0031325;positive regulation of cellular metabolic process;0.0284200204619072!GO:0051301;cell division;0.0289002938071834!GO:0008624;induction of apoptosis by extracellular signals;0.0289080703804514!GO:0044262;cellular carbohydrate metabolic process;0.0289080703804514!GO:0009607;response to biotic stimulus;0.0290602276130697!GO:0019883;antigen processing and presentation of endogenous antigen;0.029097683333056!GO:0040029;regulation of gene expression, epigenetic;0.0302011528822622!GO:0008097;5S rRNA binding;0.0302865251699223!GO:0050851;antigen receptor-mediated signaling pathway;0.0305029163356093!GO:0000087;M phase of mitotic cell cycle;0.0308007909044065!GO:0008320;protein transmembrane transporter activity;0.0309134196172468!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.030927137962417!GO:0000119;mediator complex;0.0312050034908616!GO:0051920;peroxiredoxin activity;0.0315897641635593!GO:0045185;maintenance of protein localization;0.0315897641635593!GO:0005784;translocon complex;0.0318554419797092!GO:0019843;rRNA binding;0.0320488768552259!GO:0008017;microtubule binding;0.0321061127889825!GO:0015980;energy derivation by oxidation of organic compounds;0.0324851585119091!GO:0030119;AP-type membrane coat adaptor complex;0.0325526356459092!GO:0030659;cytoplasmic vesicle membrane;0.0341917986955039!GO:0012506;vesicle membrane;0.0341917986955039!GO:0004003;ATP-dependent DNA helicase activity;0.0344607616938378!GO:0007067;mitosis;0.0347523821296914!GO:0006497;protein amino acid lipidation;0.0347699357216673!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0354536066916343!GO:0032508;DNA duplex unwinding;0.0356812453083374!GO:0032392;DNA geometric change;0.0356812453083374!GO:0043306;positive regulation of mast cell degranulation;0.0366102580192371!GO:0045921;positive regulation of exocytosis;0.0366102580192371!GO:0043302;positive regulation of leukocyte degranulation;0.0366102580192371!GO:0019220;regulation of phosphate metabolic process;0.0366102580192371!GO:0051174;regulation of phosphorus metabolic process;0.0366102580192371!GO:0001819;positive regulation of cytokine production;0.0367680628074346!GO:0030133;transport vesicle;0.0367708237160944!GO:0000209;protein polyubiquitination;0.0368073541028138!GO:0051087;chaperone binding;0.0369034156913094!GO:0033157;regulation of intracellular protein transport;0.0369034156913094!GO:0042306;regulation of protein import into nucleus;0.0369034156913094!GO:0005819;spindle;0.0375413826293841!GO:0005097;Rab GTPase activator activity;0.0380407848678703!GO:0031124;mRNA 3'-end processing;0.0383099215924297!GO:0051098;regulation of binding;0.0388451245582827!GO:0019221;cytokine and chemokine mediated signaling pathway;0.0388697275575104!GO:0043284;biopolymer biosynthetic process;0.0388697275575104!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0388697275575104!GO:0050811;GABA receptor binding;0.0388697275575104!GO:0033033;negative regulation of myeloid cell apoptosis;0.0388697275575104!GO:0001803;regulation of type III hypersensitivity;0.0388697275575104!GO:0032733;positive regulation of interleukin-10 production;0.0388697275575104!GO:0033025;regulation of mast cell apoptosis;0.0388697275575104!GO:0001805;positive regulation of type III hypersensitivity;0.0388697275575104!GO:0033023;mast cell homeostasis;0.0388697275575104!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0388697275575104!GO:0033032;regulation of myeloid cell apoptosis;0.0388697275575104!GO:0001802;type III hypersensitivity;0.0388697275575104!GO:0033028;myeloid cell apoptosis;0.0388697275575104!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0388697275575104!GO:0033026;negative regulation of mast cell apoptosis;0.0388697275575104!GO:0033024;mast cell apoptosis;0.0388697275575104!GO:0042110;T cell activation;0.0388850532538226!GO:0000049;tRNA binding;0.0389452160722507!GO:0051651;maintenance of cellular localization;0.0401444921860147!GO:0033367;protein localization in mast cell secretory granule;0.0401444921860147!GO:0033365;protein localization in organelle;0.0401444921860147!GO:0033371;T cell secretory granule organization and biogenesis;0.0401444921860147!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0401444921860147!GO:0033375;protease localization in T cell secretory granule;0.0401444921860147!GO:0042629;mast cell granule;0.0401444921860147!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0401444921860147!GO:0033364;mast cell secretory granule organization and biogenesis;0.0401444921860147!GO:0033380;granzyme B localization in T cell secretory granule;0.0401444921860147!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0401444921860147!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0401444921860147!GO:0033368;protease localization in mast cell secretory granule;0.0401444921860147!GO:0033366;protein localization in secretory granule;0.0401444921860147!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0401444921860147!GO:0033374;protein localization in T cell secretory granule;0.0401444921860147!GO:0006289;nucleotide-excision repair;0.0402054113065948!GO:0008159;positive transcription elongation factor activity;0.0403014441005513!GO:0003702;RNA polymerase II transcription factor activity;0.040448019654553!GO:0006596;polyamine biosynthetic process;0.040448019654553!GO:0007259;JAK-STAT cascade;0.0406411716634413!GO:0022884;macromolecule transmembrane transporter activity;0.0407609492250172!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0407609492250172!GO:0000776;kinetochore;0.0407609492250172!GO:0043433;negative regulation of transcription factor activity;0.0414120889225464!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0414120889225464!GO:0000303;response to superoxide;0.0417576669782944!GO:0008180;signalosome;0.043193421594402!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0432174912893341!GO:0002819;regulation of adaptive immune response;0.0432174912893341!GO:0043281;regulation of caspase activity;0.0432875127818326!GO:0008629;induction of apoptosis by intracellular signals;0.0439721297433101!GO:0030137;COPI-coated vesicle;0.0440583577091722!GO:0008094;DNA-dependent ATPase activity;0.0445745305155474!GO:0019747;regulation of isoprenoid metabolic process;0.0450707079388869!GO:0044433;cytoplasmic vesicle part;0.0453417879502885!GO:0015036;disulfide oxidoreductase activity;0.0453538808458282!GO:0001516;prostaglandin biosynthetic process;0.046024165720168!GO:0046457;prostanoid biosynthetic process;0.046024165720168!GO:0030099;myeloid cell differentiation;0.0460403568125795!GO:0016860;intramolecular oxidoreductase activity;0.0460403568125795!GO:0004721;phosphoprotein phosphatase activity;0.04613860631581!GO:0004563;beta-N-acetylhexosaminidase activity;0.0465307389806481!GO:0048146;positive regulation of fibroblast proliferation;0.0465307389806481!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0467467628341612!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0467467628341612!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0469005492236773!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.047285854795626!GO:0005657;replication fork;0.0473066169414212!GO:0051539;4 iron, 4 sulfur cluster binding;0.0473066169414212!GO:0003756;protein disulfide isomerase activity;0.0473066169414212!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0473066169414212!GO:0008022;protein C-terminus binding;0.0478319260448594!GO:0016601;Rac protein signal transduction;0.0485964861591797!GO:0019079;viral genome replication;0.0489730740671062!GO:0006505;GPI anchor metabolic process;0.0493425110772215!GO:0042809;vitamin D receptor binding;0.0493468947436066
 
|sample_id=11228
 
|sample_id=11228
 
|sample_note=
 
|sample_note=
Line 76: Line 100:
 
|sample_tissue=blood
 
|sample_tissue=blood
 
|top_motifs=NANOG{mouse}:2.59293666462;AIRE:2.11649186387;DMAP1_NCOR{1,2}_SMARC:1.98223898767;CREB1:1.86680356647;SPI1:1.83806444278;NFKB1_REL_RELA:1.83101082671;ATF5_CREB3:1.7227099311;LMO2:1.65446974895;FOXD3:1.64999042637;PAX2:1.62271947354;RUNX1..3:1.61654226052;SPIB:1.52165480371;NFIL3:1.4321359863;TGIF1:1.38557910372;RFX2..5_RFXANK_RFXAP:1.36680007886;ELF1,2,4:1.35569803058;ETS1,2:1.32741005656;ATF4:1.31369779961;FOXN1:1.30185852288;PAX6:1.26052997707;EN1,2:1.18073867565;PAX3,7:1.0887795343;FOX{F1,F2,J1}:0.9941953554;NANOG:0.946786754164;FOXP1:0.934836570403;BREu{core}:0.893076492554;BPTF:0.887469108931;MYFfamily:0.833542923053;FOXQ1:0.815475296076;IRF1,2:0.787104938434;FOXL1:0.773870010768;NHLH1,2:0.746103898795;HMX1:0.735707261405;FOXP3:0.718978216789;RORA:0.712380032544;HIF1A:0.704020910943;TLX2:0.702293455124;CRX:0.692494711833;ZBTB16:0.673628163211;POU2F1..3:0.673382068177;MYB:0.64453026773;ATF6:0.630285616616;NKX6-1,2:0.599275008577;FOXO1,3,4:0.531027354386;MYOD1:0.527813038006;PDX1:0.460197521403;SREBF1,2:0.450776927804;HOXA9_MEIS1:0.439889121369;IRF7:0.425248040245;RXRA_VDR{dimer}:0.391444566259;BACH2:0.389598237525;OCT4_SOX2{dimer}:0.387404634733;FOS_FOS{B,L1}_JUN{B,D}:0.3870731574;FOXA2:0.376216028299;ZEB1:0.372997103145;HBP1_HMGB_SSRP1_UBTF:0.368837072146;ELK1,4_GABP{A,B1}:0.331487293754;FOX{D1,D2}:0.294614906206;HMGA1,2:0.278842588491;FOSL2:0.269129502797;NR6A1:0.243522590263;SMAD1..7,9:0.229218829213;CDX1,2,4:0.216474726908;NFE2:0.188971110413;IKZF2:0.188220844099;MAFB:0.172089250482;XBP1:0.151106551876;MEF2{A,B,C,D}:0.142590119228;PAX4:0.141118908807;T:0.118308317972;ATF2:0.116152146898;EP300:0.0953385921783;POU5F1:0.0948109145732;JUN:0.0919721877687;TFAP4:0.0656294285041;CEBPA,B_DDIT3:0.0503868739358;HLF:0.0474202310157;PITX1..3:0.0439912489928;ZNF148:0.0419512262487;ALX1:0.0279708131785;FOX{I1,J2}:0.00508496125042;NKX2-2,8:-0.000379986178322;CUX2:-0.0302221295155;SNAI1..3:-0.0510660492921;TOPORS:-0.0545255328624;SOX5:-0.0868325775202;ESR1:-0.0950718206986;EVI1:-0.0963205559694;EGR1..3:-0.100839049806;CDC5L:-0.13044401703;ESRRA:-0.141865771721;GATA4:-0.147146399873;STAT5{A,B}:-0.160233214037;GATA6:-0.17822760586;TAL1_TCF{3,4,12}:-0.181424667771;RBPJ:-0.193390958645;TEF:-0.210379618961;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.219281682176;HAND1,2:-0.24152114603;NR5A1,2:-0.242361637043;SOX2:-0.251875300332;ZNF238:-0.252192568255;NFATC1..3:-0.274747785422;TFAP2{A,C}:-0.291751012725;ALX4:-0.301291602195;STAT1,3:-0.331826560545;ZFP161:-0.335214474273;GLI1..3:-0.33677935804;SOX{8,9,10}:-0.336869393088;NFY{A,B,C}:-0.345972602063;HNF4A_NR2F1,2:-0.366085373516;PRRX1,2:-0.388600303451;POU1F1:-0.389586747843;DBP:-0.393039268641;ARID5B:-0.428493625059;YY1:-0.443471265477;HNF1A:-0.447448818961;PAX8:-0.463940143183;MED-1{core}:-0.472956295865;NFE2L2:-0.473675785623;STAT2,4,6:-0.500451410462;bHLH_family:-0.514406783646;NKX2-3_NKX2-5:-0.526622542207;POU3F1..4:-0.549566684004;LHX3,4:-0.550515834317;E2F1..5:-0.568200878953;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.590605796192;PPARG:-0.60554860216;NKX3-1:-0.613205631647;AR:-0.615564091535;SOX17:-0.623925925502;RXR{A,B,G}:-0.64235019668;AHR_ARNT_ARNT2:-0.644586975618;REST:-0.645444204811;MZF1:-0.654589809414;NRF1:-0.656641122792;HOX{A5,B5}:-0.679759693179;PATZ1:-0.709514308888;ZNF384:-0.724438031122;SRF:-0.728580187004;ZNF143:-0.745963844023;PRDM1:-0.772055924083;SP1:-0.773474472092;MTE{core}:-0.783108060107;HOX{A4,D4}:-0.784269499883;HSF1,2:-0.7988099112;HES1:-0.801240167424;TFCP2:-0.817628344983;POU6F1:-0.855447753886;HOX{A6,A7,B6,B7}:-0.871789313679;TBP:-0.875765372326;MAZ:-0.88191355337;RREB1:-0.911574219091;LEF1_TCF7_TCF7L1,2:-0.912562284868;ZBTB6:-0.917470090182;RFX1:-0.919876324234;MYBL2:-0.936983923983;NR1H4:-0.942338344283;NFE2L1:-0.961161158424;HIC1:-0.979751146507;SPZ1:-1.02400253658;NFIX:-1.03896718381;TFAP2B:-1.05859383371;MTF1:-1.09096982483;NKX3-2:-1.09586822691;GTF2A1,2:-1.09728135771;TP53:-1.11499253401;PAX5:-1.18595246675;NKX2-1,4:-1.19239194166;ONECUT1,2:-1.23469210373;NR3C1:-1.23902541769;GZF1:-1.24163043376;VSX1,2:-1.25415652664;ADNP_IRX_SIX_ZHX:-1.26287663915;GFI1:-1.29298612795;TEAD1:-1.42271706795;GCM1,2:-1.42323150152;ZNF423:-1.43454428518;UFEwm:-1.45931027949;TBX4,5:-1.48923312635;TFDP1:-1.49025316483;EBF1:-1.50109371565;GFI1B:-1.55699280433;XCPE1{core}:-1.56131407293;GTF2I:-1.56995988281;PBX1:-1.6319686754;ZIC1..3:-1.6482229389;IKZF1:-1.66426045745;FOXM1:-1.70335368566;KLF4:-1.96706258211;TLX1..3_NFIC{dimer}:-2.09613758378;PAX1,9:-2.39827189994
 
|top_motifs=NANOG{mouse}:2.59293666462;AIRE:2.11649186387;DMAP1_NCOR{1,2}_SMARC:1.98223898767;CREB1:1.86680356647;SPI1:1.83806444278;NFKB1_REL_RELA:1.83101082671;ATF5_CREB3:1.7227099311;LMO2:1.65446974895;FOXD3:1.64999042637;PAX2:1.62271947354;RUNX1..3:1.61654226052;SPIB:1.52165480371;NFIL3:1.4321359863;TGIF1:1.38557910372;RFX2..5_RFXANK_RFXAP:1.36680007886;ELF1,2,4:1.35569803058;ETS1,2:1.32741005656;ATF4:1.31369779961;FOXN1:1.30185852288;PAX6:1.26052997707;EN1,2:1.18073867565;PAX3,7:1.0887795343;FOX{F1,F2,J1}:0.9941953554;NANOG:0.946786754164;FOXP1:0.934836570403;BREu{core}:0.893076492554;BPTF:0.887469108931;MYFfamily:0.833542923053;FOXQ1:0.815475296076;IRF1,2:0.787104938434;FOXL1:0.773870010768;NHLH1,2:0.746103898795;HMX1:0.735707261405;FOXP3:0.718978216789;RORA:0.712380032544;HIF1A:0.704020910943;TLX2:0.702293455124;CRX:0.692494711833;ZBTB16:0.673628163211;POU2F1..3:0.673382068177;MYB:0.64453026773;ATF6:0.630285616616;NKX6-1,2:0.599275008577;FOXO1,3,4:0.531027354386;MYOD1:0.527813038006;PDX1:0.460197521403;SREBF1,2:0.450776927804;HOXA9_MEIS1:0.439889121369;IRF7:0.425248040245;RXRA_VDR{dimer}:0.391444566259;BACH2:0.389598237525;OCT4_SOX2{dimer}:0.387404634733;FOS_FOS{B,L1}_JUN{B,D}:0.3870731574;FOXA2:0.376216028299;ZEB1:0.372997103145;HBP1_HMGB_SSRP1_UBTF:0.368837072146;ELK1,4_GABP{A,B1}:0.331487293754;FOX{D1,D2}:0.294614906206;HMGA1,2:0.278842588491;FOSL2:0.269129502797;NR6A1:0.243522590263;SMAD1..7,9:0.229218829213;CDX1,2,4:0.216474726908;NFE2:0.188971110413;IKZF2:0.188220844099;MAFB:0.172089250482;XBP1:0.151106551876;MEF2{A,B,C,D}:0.142590119228;PAX4:0.141118908807;T:0.118308317972;ATF2:0.116152146898;EP300:0.0953385921783;POU5F1:0.0948109145732;JUN:0.0919721877687;TFAP4:0.0656294285041;CEBPA,B_DDIT3:0.0503868739358;HLF:0.0474202310157;PITX1..3:0.0439912489928;ZNF148:0.0419512262487;ALX1:0.0279708131785;FOX{I1,J2}:0.00508496125042;NKX2-2,8:-0.000379986178322;CUX2:-0.0302221295155;SNAI1..3:-0.0510660492921;TOPORS:-0.0545255328624;SOX5:-0.0868325775202;ESR1:-0.0950718206986;EVI1:-0.0963205559694;EGR1..3:-0.100839049806;CDC5L:-0.13044401703;ESRRA:-0.141865771721;GATA4:-0.147146399873;STAT5{A,B}:-0.160233214037;GATA6:-0.17822760586;TAL1_TCF{3,4,12}:-0.181424667771;RBPJ:-0.193390958645;TEF:-0.210379618961;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.219281682176;HAND1,2:-0.24152114603;NR5A1,2:-0.242361637043;SOX2:-0.251875300332;ZNF238:-0.252192568255;NFATC1..3:-0.274747785422;TFAP2{A,C}:-0.291751012725;ALX4:-0.301291602195;STAT1,3:-0.331826560545;ZFP161:-0.335214474273;GLI1..3:-0.33677935804;SOX{8,9,10}:-0.336869393088;NFY{A,B,C}:-0.345972602063;HNF4A_NR2F1,2:-0.366085373516;PRRX1,2:-0.388600303451;POU1F1:-0.389586747843;DBP:-0.393039268641;ARID5B:-0.428493625059;YY1:-0.443471265477;HNF1A:-0.447448818961;PAX8:-0.463940143183;MED-1{core}:-0.472956295865;NFE2L2:-0.473675785623;STAT2,4,6:-0.500451410462;bHLH_family:-0.514406783646;NKX2-3_NKX2-5:-0.526622542207;POU3F1..4:-0.549566684004;LHX3,4:-0.550515834317;E2F1..5:-0.568200878953;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.590605796192;PPARG:-0.60554860216;NKX3-1:-0.613205631647;AR:-0.615564091535;SOX17:-0.623925925502;RXR{A,B,G}:-0.64235019668;AHR_ARNT_ARNT2:-0.644586975618;REST:-0.645444204811;MZF1:-0.654589809414;NRF1:-0.656641122792;HOX{A5,B5}:-0.679759693179;PATZ1:-0.709514308888;ZNF384:-0.724438031122;SRF:-0.728580187004;ZNF143:-0.745963844023;PRDM1:-0.772055924083;SP1:-0.773474472092;MTE{core}:-0.783108060107;HOX{A4,D4}:-0.784269499883;HSF1,2:-0.7988099112;HES1:-0.801240167424;TFCP2:-0.817628344983;POU6F1:-0.855447753886;HOX{A6,A7,B6,B7}:-0.871789313679;TBP:-0.875765372326;MAZ:-0.88191355337;RREB1:-0.911574219091;LEF1_TCF7_TCF7L1,2:-0.912562284868;ZBTB6:-0.917470090182;RFX1:-0.919876324234;MYBL2:-0.936983923983;NR1H4:-0.942338344283;NFE2L1:-0.961161158424;HIC1:-0.979751146507;SPZ1:-1.02400253658;NFIX:-1.03896718381;TFAP2B:-1.05859383371;MTF1:-1.09096982483;NKX3-2:-1.09586822691;GTF2A1,2:-1.09728135771;TP53:-1.11499253401;PAX5:-1.18595246675;NKX2-1,4:-1.19239194166;ONECUT1,2:-1.23469210373;NR3C1:-1.23902541769;GZF1:-1.24163043376;VSX1,2:-1.25415652664;ADNP_IRX_SIX_ZHX:-1.26287663915;GFI1:-1.29298612795;TEAD1:-1.42271706795;GCM1,2:-1.42323150152;ZNF423:-1.43454428518;UFEwm:-1.45931027949;TBX4,5:-1.48923312635;TFDP1:-1.49025316483;EBF1:-1.50109371565;GFI1B:-1.55699280433;XCPE1{core}:-1.56131407293;GTF2I:-1.56995988281;PBX1:-1.6319686754;ZIC1..3:-1.6482229389;IKZF1:-1.66426045745;FOXM1:-1.70335368566;KLF4:-1.96706258211;TLX1..3_NFIC{dimer}:-2.09613758378;PAX1,9:-2.39827189994
 +
|xref=
 +
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11228-116C4;search_select_hide=table117:FF:11228-116C4
 
}}
 
}}

Latest revision as of 07:26, 3 June 2020

Name:Dendritic Cells - plasmacytoid, donor1
Species:Human (Homo sapiens)
Library ID:CNhs10857
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stage22 years old adult
sexfemale
age22
cell typedendritic cell, plasmacytoid
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberPDC737
catalog number3H100-72-5
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004835
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10857 CAGE DRX008215 DRR009087
Accession ID Hg19

Library idBAMCTSS
CNhs10857 DRZ000512 DRZ001897
Accession ID Hg38

Library idBAMCTSS
CNhs10857 DRZ011862 DRZ013247
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.143
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.288
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.234
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.251
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.0929
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.262
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.169
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.387
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.435
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0.0929
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.353
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.587
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0929
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.0929
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.217
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.234
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.0929
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.247
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.167
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.528
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.251
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.193
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.386
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.0929
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0374
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.0929
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0221
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.234
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.614
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.362
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.0929
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.169
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.197
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.0929
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.169
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature1.139
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0.0929
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.485
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0.0929
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.169
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.0929
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10857

Jaspar motifP-value
MA0002.22.87346e-8
MA0003.10.933
MA0004.10.332
MA0006.10.575
MA0007.10.73
MA0009.10.109
MA0014.10.794
MA0017.10.887
MA0018.20.00319
MA0019.10.542
MA0024.10.077
MA0025.10.0798
MA0027.10.433
MA0028.10.257
MA0029.10.706
MA0030.10.441
MA0031.10.191
MA0035.20.523
MA0038.10.148
MA0039.20.575
MA0040.10.948
MA0041.10.293
MA0042.10.793
MA0043.14.07063e-4
MA0046.10.142
MA0047.20.624
MA0048.10.00561
MA0050.11.65798e-4
MA0051.10.0244
MA0052.10.182
MA0055.13.39387e-4
MA0057.10.278
MA0058.10.205
MA0059.10.437
MA0060.10.0433
MA0061.15.27558e-14
MA0062.27.95191e-8
MA0065.20.398
MA0066.10.376
MA0067.17.84337e-4
MA0068.10.133
MA0069.10.804
MA0070.10.0356
MA0071.10.663
MA0072.10.502
MA0073.10.349
MA0074.10.621
MA0076.10.043
MA0077.10.315
MA0078.10.939
MA0079.20.977
MA0080.22.53396e-13
MA0081.11.4981e-5
MA0083.10.216
MA0084.10.736
MA0087.10.748
MA0088.10.985
MA0090.19.6346e-4
MA0091.10.0817
MA0092.10.933
MA0093.10.404
MA0099.21.02178e-6
MA0100.10.884
MA0101.11.44128e-14
MA0102.22.27259e-4
MA0103.10.095
MA0104.20.0791
MA0105.13.9674e-10
MA0106.10.075
MA0107.15.67079e-16
MA0108.22.0596e-4
MA0111.10.227
MA0112.20.265
MA0113.10.978
MA0114.10.618
MA0115.10.0719
MA0116.10.00318
MA0117.10.0806
MA0119.10.828
MA0122.10.806
MA0124.10.9
MA0125.10.231
MA0131.10.676
MA0135.10.19
MA0136.11.09579e-14
MA0137.20.491
MA0138.20.404
MA0139.10.735
MA0140.10.643
MA0141.10.838
MA0142.10.823
MA0143.10.941
MA0144.10.976
MA0145.10.26
MA0146.10.252
MA0147.10.109
MA0148.10.338
MA0149.10.707
MA0150.16.14971e-5
MA0152.10.0775
MA0153.13.87981e-4
MA0154.10.00836
MA0155.10.466
MA0156.11.42717e-11
MA0157.10.239
MA0159.10.396
MA0160.10.875
MA0162.10.56
MA0163.11.89354e-4
MA0164.10.665
MA0258.10.141
MA0259.10.484



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10857

Novel motifP-value
10.322
100.0136
1000.954
1010.493
1020.557
1030.228
1040.366
1050.342
1060.00918
1070.778
1080.17
1090.191
110.278
1100.697
1110.135
1120.763
1130.582
1140.121
1150.505
1160.877
1170.00627
1180.239
1190.173
120.414
1200.892
1210.423
1220.186
1230.00319
1240.207
1250.0627
1260.483
1270.603
1280.13
1290.956
130.066
1300.949
1310.969
1320.0561
1330.341
1340.455
1350.916
1360.547
1370.00166
1380.642
1390.0381
140.192
1400.996
1410.421
1420.348
1430.011
1440.817
1450.754
1460.776
1470.148
1480.024
1490.499
150.0723
1500.586
1510.274
1520.994
1530.454
1540.458
1550.0703
1560.921
1570.745
1580.163
1590.231
160.738
1600.681
1610.744
1620.647
1630.672
1640.233
1650.215
1660.331
1670.177
1680.734
1690.951
170.915
180.636
190.381
20.491
200.911
210.847
220.999
230.468
240.371
250.198
260.349
270.548
280.408
290.0202
30.133
300.141
310.736
320.042
330.206
340.966
350.0475
360.128
370.095
380.528
390.722
40.421
400.674
410.05
420.0813
430.104
440.978
450.533
460.379
470.551
480.687
490.105
50.476
500.753
510.382
520.586
530.32
540.83
550.604
560.513
570.586
580.0526
590.888
60.563
600.19
610.0739
620.0277
630.65
640.463
650.671
660.419
670.291
680.367
690.718
70.175
700.0282
710.0631
720.229
730.553
740.252
750.0773
760.324
770.719
780.0362
790.937
80.753
800.121
810.315
820.242
830.284
840.033
850.221
860.0643
870.121
880.45
890.473
90.692
900.0691
910.842
920.526
930.508
940.0937
950.153
960.923
970.936
980.228
996.13711e-4



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10857


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0000990 (conventional dendritic cell)
0000255 (eukaryotic cell)
0000451 (dendritic cell)
0000840 (immature conventional dendritic cell)
0000784 (plasmacytoid dendritic cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000044 (human monocyte immature derived dendritic cell sample)
0000045 (human plasmacytoid dendritic cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)