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{{f5samples
 
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
+
|DRA_sample_Accession=CAGE@SAMD00006016
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000451,CL:0000548,CL:0000557,CL:0000566,CL:0000723,CL:0000738,CL:0000763,CL:0000837,CL:0000840,CL:0000988,CL:0000990,CL:0001012,CL:0001019,CL:0001029,CL:0002009,CL:0002031,CL:0002032,CL:0002320,CL:0002371
+
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00006016
 +
|accession_numbers=CAGE;DRX008214;DRR009086;DRZ000511;DRZ001896;DRZ011861;DRZ013246
 +
|accession_numbers_RNASeq=sRNA-Seq;DRX037007;DRR041373;DRZ007015
 +
|ancestors_in_anatomy_facet=
 +
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0000990,CL:0000255,CL:0000451,CL:0000840
 
|ancestors_in_disease_facet=
 
|ancestors_in_disease_facet=
 +
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000044
 
|comment=
 
|comment=
 
|created_by=
 
|created_by=
 
|creation_date=
 
|creation_date=
 +
|data_phase=2
 +
|datafreeze_phase=2
 
|def=
 
|def=
|
+
|expression_enrichment_score=
 
|fonse_cell_line=
 
|fonse_cell_line=
 
|fonse_cell_line_closure=
 
|fonse_cell_line_closure=
Line 35: Line 44:
 
|fonse_treatment_closure=
 
|fonse_treatment_closure=
 
|has_quality=
 
|has_quality=
 +
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Dendritic%2520Cells%2520-%2520monocyte%2520immature%2520derived%252c%2520donor3.CNhs12000.11384-118B7.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Dendritic%2520Cells%2520-%2520monocyte%2520immature%2520derived%252c%2520donor3.CNhs12000.11384-118B7.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Dendritic%2520Cells%2520-%2520monocyte%2520immature%2520derived%252c%2520donor3.CNhs12000.11384-118B7.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Dendritic%2520Cells%2520-%2520monocyte%2520immature%2520derived%252c%2520donor3.CNhs12000.11384-118B7.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Dendritic%2520Cells%2520-%2520monocyte%2520immature%2520derived%252c%2520donor3.CNhs12000.11384-118B7.hg38.nobarcode.ctss.bed.gz
 
|id=FF:11384-118B7
 
|id=FF:11384-118B7
|is_a=EFO:0002091;;FF:0000002;;FF:0000044;;FF:0000210
+
|is_a=EFO:0002091;;FF:0000044
 +
|is_obsolete=
 +
|library_id=CNhs12000
 +
|library_id_phase_based=2:CNhs12000
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11384
 +
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10002.GTGGCC.11384
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11384
 +
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10002.GTGGCC.11384
 
|name=Dendritic Cells - monocyte immature derived, donor3
 
|name=Dendritic Cells - monocyte immature derived, donor3
 
|namespace=FANTOM5
 
|namespace=FANTOM5
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|profile_cagescan=,,,
 
|profile_cagescan=,,,
 
|profile_hcage=CNhs12000,LSID837,release011,COMPLETED
 
|profile_hcage=CNhs12000,LSID837,release011,COMPLETED
|profile_rnaseq=,,,
+
|profile_rnaseq=
 
|profile_srnaseq=SRhi10002,,,
 
|profile_srnaseq=SRhi10002,,,
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 +
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.253902254549452,0,0.264822435866768,0.0878328762900543,0,1.2119254954722,0,0,0,0,0,0,0,0,0.99599403477547,0,0,0.638042003451761,0,0,0,0,0,0.39721544925546,0,0,0.0128219717372467,0,0,0,0,0,0,0,0,0,0,0,0,0.453338680029769,0.0542137952531537,0,0,0,0,0,0,0.221359407009807,0.0486742596452202,0,0,0,0.102404861888327,0,0,0,0.338924193313409,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0.102404861888327,0,0,0,0,0.254728757045322,0,0,0,0,0.0542137952531537,0,0,0.0271068976265769,0,0,-0.541789491860353,0.0271068976265769,0,0,0.377648192282803,-0.0275586249338272,0.0271068976265769,0,0.0542137952531537,0.0542137952531537,0.123324055772101,0.0722684745877232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.312116143536912,0.47000822825259,0,0.0542137952531537,0.0542137952531537,0,0,0
 +
|repeat_enrich_byname=0,0,0,0.0542137952531537,0.123324055772101,0,0.0542137952531537,0.145778561516109,0.0542137952531537,0.0542137952531537,0.0542137952531537,0,0,0,0,0,0.167041409350274,0,0.560898553132408,0.223762413000611,0,0.0542137952531537,-0.256401457580557,0,0.0542137952531537,0,0.0254882702624839,0,0,0,0.0542137952531537,0,-0.073906071699411,0,-0.0504125515893149,0,0,0,0,0,0.0362830277596197,0,0.0093807166125318,-0.0683442610773682,0,0.0542137952531537,0,0,0.143979615301514,0,0.458002264146411,-0.0827201683234173,-0.221611588102807,-0.271076729716563,-0.04680465889238,0,0,0,-0.474938382861023,-0.703739991764514,0,0,-0.121779851751874,0.188886818306337,0,0,-0.391044581551635,0,0.174268031706909,0.183994903737939,0,0,0,0,0.0542137952531537,0,0,0.0542137952531537,0,0,0,0,0,-0.0303865691948597,0.18626701299321,0,0,0,0.00649071191495321,-0.0166906722639394,0,-0.0138323107379372,0.190095150136782,-0.0915227560238914,0,-0.609556259018426,0,0.244917368023393,0.0386676054316385,0.376569137814628,0.377648192282803,-0.093188054117985,-0.189981719549847,0.102404861888327,0.00610509079118104,-0.350356074557997,0.147523823347619,0.0963840069878594,-0.156955597217011,-0.136784212000826,0.0816081054624183,0,0,-0.0775089264793031,-0.288838410113067,0,0,0.0571923805565328,-0.0351651472022839,-0.0954122912990215,0.035173541311156,-0.0391296524960473,0.162028056344145,-0.0395325284566706,0.105944853196754,0,-0.193282169781432,-0.148615456830999,0,0,0.126454608238374,0.210081927668147,0.356207707188952,0,0.428761499712909,0.298933294446715,0.183638777762041,0.0337350850612215,0.064715817927054,0,0,0.141766954590108,0,0,0,0,0,-0.314300141422107,0.232788812868575,0.0218731954897773,0,-0.211297837040869,0.0271068976265769,-0.177573636261474,0,-0.194911104001512,0.0656700652597171,0.0130149765492155,0.301214169566992,0,0.113025755193285,0.478286731825407,-0.0192121348228938,-0.0551172498676544,0.627812251669013,-0.0324811666430723,-0.059347082353712,-0.111258494090731,0.319397077079061,-0.124307696593413,-0.0339130372221341,0,-0.541789491860353,0.322284947597701,0.0467205495510065,-0.556423006602995,0,0.0294173666469331,0,-0.233347808593432,0.0439218060358832,0.438321311679885,-0.149050887144181,-0.0479065102516275,0.519417305052146,0,-0.331334068419877,-0.788130937773974,0,0,0,0,-0.0961532880814857,-0.697695966512583,0.695274111915348,0.071756218709424,0,-0.535351401344335,0,0,-0.108542980229684,0.0192527192809334,0.0542137952531537,-0.228749828649022,-0.15262260396886,0.00409954304606663,0.0692400194941366,0.414220284635839,0,-0.591486542739571,0,0,-0.264172805160003,0,0.446044157023487,0.958599153985443,-0.0416056793725189,0.109335467823752,0,0,0.0772009910801464,0,0.44193100710525,0,0.0542137952531537,0.103129596379893,0,0,0.0512024309441635,0,0.0330244645645039,0,0,0,0,0,0.102404861888327,0,0.0480701015001495,-0.300619534963294,0,0,0,0,0,0,0,0,0,0,0.060969344677928,-0.0667989445085165,0.0621936772526504,0,0,0,0,0.00563600445633233,0.0514921949505983,0,0.182776215130742,0,0.463316431565755,0,0,0.0162638720991158,0,0,0.0783093285707404,0.0271068976265769,0.0446744048346632,-0.0196236044539075,0.0542137952531537,0,0,0.0903231539222927,0.102404861888327,0,0,0,-0.127331362509539,0,0,0.506417168353578,0,0.0653186574031324,-0.0273680842936878,0,-0.150962800893814,-0.0498958182848703,0.244686894317383,0,0,0.746148839241099,0,0.016818715640209,-0.0117471920108843,-0.0823702229656663,0.0542137952531537,-0.0209247759461169,0,0,0,0,0,0.0542137952531537,-0.214314512399756,0.0542137952531537,0,0,0,0,0,0,0,0.0542137952531537,0,0,0.364746118833642,0.0929870362705602,-0.0640596705171081,0,0.0542137952531537,0,0,0,0,0.0270964078652604,0.173093029236822,0,0,0,0,0,0.102404861888327,0,0,-0.0355093851072276,0,0,0,0,0,0.338924193313409,0,0.145778561516109,0,0,0.121451957326955,0,0,0.1585544223625,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,0.264822435866768,0,0,0,0,0,0,0,0.374200271190523,0,0.0542137952531537,0,0,-0.0596705784558235,0,0,0,0.0409821767269525,0,0.253902254549452,0,0,0,0.0271068976265769,0,0.102404861888327,0,0.0271068976265769,0,0,0,0,0,0,0,0,0,0.142858042031584,0,0,0,-0.326998052624366,0.00120285612472225,0.0956333409331622,-0.0222773192259633,0,0,-0.232628352633041,0,0,0,0,0,0,0.0415488567295274,0,0,0,0.254728757045322,0,0,0,0,0,0.0542137952531537,0,0,0,0.221359407009807,0,0,0,0,0,0,0,0,0,0,0,-0.0560062377783195,0,0,0,0,0,0,0,0.39721544925546,0,0,-0.0378190145473725,0,0,0,0.0143152369460819,0,0,0.116845983366644,-0.256113502196571,-0.0486651809458641,0,0,0,-0.054385572482455,0.102404861888327,0,0,0,0.0356274744694258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638042003451761,0,0,0,0,0,0,0.0271068976265769,0,0,0,0,0,0.0512024309441635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0542137952531537,0.102404861888327,0.0926055464645355,0,0,0,0,0,0,0.0659848151092148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205697615794529,0,0,0,0.243494080587493,0,0,0,0,0,0,0,0,0.145778561516109,0,0,0,0,0,0,0,0,0,0,0.18521109292907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|rna_box=118
 
|rna_box=118
 
|rna_catalog_number=3H100-70-5
 
|rna_catalog_number=3H100-70-5
Line 56: Line 82:
 
|rna_tube_id=118B7
 
|rna_tube_id=118B7
 
|rna_weight_ug=5
 
|rna_weight_ug=5
 +
|rnaseq_library_id=SRhi10002.GTGGCC
 
|sample_age=65
 
|sample_age=65
 +
|sample_category=primary cells
 
|sample_cell_catalog=N/A
 
|sample_cell_catalog=N/A
 
|sample_cell_line=
 
|sample_cell_line=
Line 69: Line 97:
 
|sample_ethnicity=C
 
|sample_ethnicity=C
 
|sample_experimental_condition=
 
|sample_experimental_condition=
 +
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.91873684940083e-221!GO:0005737;cytoplasm;2.16391560479396e-184!GO:0043227;membrane-bound organelle;1.77566233224271e-152!GO:0043231;intracellular membrane-bound organelle;3.67834201848654e-152!GO:0044444;cytoplasmic part;7.2621808138486e-142!GO:0043226;organelle;6.01634351618369e-140!GO:0043229;intracellular organelle;2.48257788751601e-139!GO:0044422;organelle part;1.75457735534501e-105!GO:0044446;intracellular organelle part;8.24288567916951e-104!GO:0044237;cellular metabolic process;6.28812864921186e-74!GO:0032991;macromolecular complex;3.79089920897291e-73!GO:0044238;primary metabolic process;6.20173282305773e-73!GO:0005739;mitochondrion;7.86294744058829e-72!GO:0043170;macromolecule metabolic process;1.39682259624018e-61!GO:0030529;ribonucleoprotein complex;4.83869848103159e-61!GO:0005515;protein binding;2.5168945842711e-59!GO:0031090;organelle membrane;3.10400586156333e-59!GO:0003723;RNA binding;3.25975724293962e-54!GO:0043233;organelle lumen;1.71467469336446e-51!GO:0031974;membrane-enclosed lumen;1.71467469336446e-51!GO:0044429;mitochondrial part;9.3224015487394e-51!GO:0019538;protein metabolic process;1.23685802959301e-50!GO:0033036;macromolecule localization;9.21207578483735e-49!GO:0015031;protein transport;7.7885535502607e-48!GO:0044428;nuclear part;7.14019488809316e-47!GO:0045184;establishment of protein localization;1.67108527434424e-46!GO:0008104;protein localization;1.54768052991711e-45!GO:0044260;cellular macromolecule metabolic process;4.20017614692949e-45!GO:0044267;cellular protein metabolic process;1.50250852190344e-44!GO:0031967;organelle envelope;2.16007058865202e-44!GO:0031975;envelope;5.37607569771783e-44!GO:0006412;translation;8.03296026451156e-44!GO:0009058;biosynthetic process;6.72822091667177e-43!GO:0005829;cytosol;3.79519396276117e-40!GO:0005634;nucleus;4.38704338660433e-39!GO:0044249;cellular biosynthetic process;7.13427004006272e-39!GO:0043234;protein complex;9.82196340829411e-38!GO:0009059;macromolecule biosynthetic process;1.87538777372915e-37!GO:0005740;mitochondrial envelope;7.75980079955935e-36!GO:0005840;ribosome;1.22721232868243e-35!GO:0006396;RNA processing;5.87658454107208e-35!GO:0031966;mitochondrial membrane;3.28658002256103e-34!GO:0046907;intracellular transport;5.98783944568392e-34!GO:0016071;mRNA metabolic process;3.62193878933113e-31!GO:0003735;structural constituent of ribosome;8.49985521026611e-31!GO:0006886;intracellular protein transport;1.10136435648889e-30!GO:0019866;organelle inner membrane;1.86371161763969e-30!GO:0016043;cellular component organization and biogenesis;2.95780079132164e-30!GO:0005743;mitochondrial inner membrane;4.37311105818727e-29!GO:0043283;biopolymer metabolic process;3.12748199644022e-28!GO:0033279;ribosomal subunit;1.13745185749022e-27!GO:0008380;RNA splicing;2.95537110747466e-27!GO:0031981;nuclear lumen;6.25114258006786e-27!GO:0051649;establishment of cellular localization;1.18170072738952e-26!GO:0006119;oxidative phosphorylation;1.47936079163961e-26!GO:0051641;cellular localization;3.89606220246898e-26!GO:0006397;mRNA processing;1.00484831109276e-25!GO:0010467;gene expression;3.86474032029357e-23!GO:0065003;macromolecular complex assembly;8.05323674370694e-23!GO:0051186;cofactor metabolic process;4.53424857343633e-22!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.43776685899816e-21!GO:0012505;endomembrane system;6.05287126779138e-21!GO:0044455;mitochondrial membrane part;1.04953316391359e-20!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.8438085055369e-20!GO:0006915;apoptosis;7.32501102865326e-20!GO:0005681;spliceosome;7.80497732309456e-20!GO:0022607;cellular component assembly;9.51517210981332e-20!GO:0012501;programmed cell death;9.68875176011901e-20!GO:0048770;pigment granule;2.48686070050298e-19!GO:0042470;melanosome;2.48686070050298e-19!GO:0044248;cellular catabolic process;3.86300766064473e-19!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.6908202801472e-19!GO:0016192;vesicle-mediated transport;8.70639949014738e-19!GO:0008219;cell death;9.92405498140363e-19!GO:0016265;death;9.92405498140363e-19!GO:0006732;coenzyme metabolic process;1.03323215830347e-18!GO:0005773;vacuole;1.07484028911999e-18!GO:0044445;cytosolic part;1.12364665653483e-18!GO:0005654;nucleoplasm;1.62225952015732e-18!GO:0006996;organelle organization and biogenesis;1.75717081496462e-18!GO:0000166;nucleotide binding;2.13652260399703e-18!GO:0005746;mitochondrial respiratory chain;2.57253173038871e-18!GO:0044265;cellular macromolecule catabolic process;3.55721688697464e-18!GO:0031980;mitochondrial lumen;4.71803801146602e-18!GO:0005759;mitochondrial matrix;4.71803801146602e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.56977407260277e-17!GO:0016462;pyrophosphatase activity;1.70021493345556e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;2.15866789556873e-17!GO:0005794;Golgi apparatus;2.64627861864329e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.87154387709591e-17!GO:0000323;lytic vacuole;6.59077568405037e-17!GO:0005764;lysosome;6.59077568405037e-17!GO:0017111;nucleoside-triphosphatase activity;1.46356373947843e-16!GO:0009057;macromolecule catabolic process;1.6674987229146e-16!GO:0050136;NADH dehydrogenase (quinone) activity;2.50759447788244e-16!GO:0003954;NADH dehydrogenase activity;2.50759447788244e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.50759447788244e-16!GO:0043285;biopolymer catabolic process;2.61620313797578e-16!GO:0006512;ubiquitin cycle;2.95384955753846e-16!GO:0005783;endoplasmic reticulum;3.37394347092854e-16!GO:0006605;protein targeting;6.77383853610134e-16!GO:0006457;protein folding;9.04654698794904e-16!GO:0043412;biopolymer modification;1.78996044153774e-15!GO:0016874;ligase activity;2.47618020286299e-15!GO:0022618;protein-RNA complex assembly;4.74711709667178e-15!GO:0000502;proteasome complex (sensu Eukaryota);5.94904271561828e-15!GO:0015935;small ribosomal subunit;8.08339381308062e-15!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.15184415819886e-15!GO:0042775;organelle ATP synthesis coupled electron transport;9.9604955913924e-15!GO:0042773;ATP synthesis coupled electron transport;9.9604955913924e-15!GO:0044451;nucleoplasm part;1.46845526464894e-14!GO:0030964;NADH dehydrogenase complex (quinone);1.85324803422929e-14!GO:0045271;respiratory chain complex I;1.85324803422929e-14!GO:0005747;mitochondrial respiratory chain complex I;1.85324803422929e-14!GO:0044432;endoplasmic reticulum part;2.26504101117392e-14!GO:0006464;protein modification process;2.90723428834953e-14!GO:0008134;transcription factor binding;3.777275406328e-14!GO:0017076;purine nucleotide binding;5.90498738940242e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.32453048710676e-14!GO:0032553;ribonucleotide binding;6.78618415827132e-14!GO:0032555;purine ribonucleotide binding;6.78618415827132e-14!GO:0015934;large ribosomal subunit;7.11996628161476e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;7.67998584926197e-14!GO:0019941;modification-dependent protein catabolic process;1.12914896530582e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.12914896530582e-13!GO:0044257;cellular protein catabolic process;1.33126232003706e-13!GO:0009056;catabolic process;1.91192804742665e-13!GO:0006511;ubiquitin-dependent protein catabolic process;1.93499907167247e-13!GO:0009055;electron carrier activity;4.07287935062439e-13!GO:0005768;endosome;1.03285682787531e-12!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.53880278507063e-12!GO:0030163;protein catabolic process;3.36041507402045e-12!GO:0042981;regulation of apoptosis;3.7141363529359e-12!GO:0048193;Golgi vesicle transport;5.55845613921321e-12!GO:0051188;cofactor biosynthetic process;5.85725099830172e-12!GO:0008135;translation factor activity, nucleic acid binding;6.54297571816417e-12!GO:0043067;regulation of programmed cell death;7.10865267655267e-12!GO:0043687;post-translational protein modification;1.05371547802529e-11!GO:0006913;nucleocytoplasmic transport;1.49067699790982e-11!GO:0019829;cation-transporting ATPase activity;1.54551380095876e-11!GO:0005789;endoplasmic reticulum membrane;2.78090125931042e-11!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.84718963101459e-11!GO:0051169;nuclear transport;3.19182371128755e-11!GO:0016787;hydrolase activity;3.21613900396468e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.24424231048802e-11!GO:0009259;ribonucleotide metabolic process;3.34886599099653e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.42068699712075e-11!GO:0006259;DNA metabolic process;4.295109211332e-11!GO:0015986;ATP synthesis coupled proton transport;5.85054000312035e-11!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.85054000312035e-11!GO:0005761;mitochondrial ribosome;7.51469023949125e-11!GO:0000313;organellar ribosome;7.51469023949125e-11!GO:0006163;purine nucleotide metabolic process;7.55074812199439e-11!GO:0015078;hydrogen ion transmembrane transporter activity;1.04681633777575e-10!GO:0051082;unfolded protein binding;1.24392448176936e-10!GO:0009150;purine ribonucleotide metabolic process;1.29357264087618e-10!GO:0016491;oxidoreductase activity;2.90085538212426e-10!GO:0006164;purine nucleotide biosynthetic process;2.93836061849962e-10!GO:0009260;ribonucleotide biosynthetic process;3.22508185585068e-10!GO:0008565;protein transporter activity;3.2639451514436e-10!GO:0009108;coenzyme biosynthetic process;3.95451229495393e-10!GO:0003743;translation initiation factor activity;4.62657907999493e-10!GO:0009152;purine ribonucleotide biosynthetic process;4.76303738493658e-10!GO:0016604;nuclear body;4.92915388437381e-10!GO:0005635;nuclear envelope;6.0170256686253e-10!GO:0005730;nucleolus;6.72254775749718e-10!GO:0009060;aerobic respiration;7.26347601863918e-10!GO:0043228;non-membrane-bound organelle;7.26347601863918e-10!GO:0043232;intracellular non-membrane-bound organelle;7.26347601863918e-10!GO:0016887;ATPase activity;7.45764282786578e-10!GO:0042623;ATPase activity, coupled;7.87056610348308e-10!GO:0006413;translational initiation;1.03912075861516e-09!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.05672548983535e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.12764155241571e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.15779961349886e-09!GO:0005524;ATP binding;1.23106006724668e-09!GO:0051246;regulation of protein metabolic process;1.41499726334266e-09!GO:0009142;nucleoside triphosphate biosynthetic process;1.42465089160178e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.42465089160178e-09!GO:0032559;adenyl ribonucleotide binding;1.44054876601594e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.45248071227672e-09!GO:0009144;purine nucleoside triphosphate metabolic process;1.45248071227672e-09!GO:0006754;ATP biosynthetic process;1.45248071227672e-09!GO:0006753;nucleoside phosphate metabolic process;1.45248071227672e-09!GO:0030554;adenyl nucleotide binding;1.51505760606694e-09!GO:0006446;regulation of translational initiation;1.61725728340591e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.65248526326534e-09!GO:0000375;RNA splicing, via transesterification reactions;1.65248526326534e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.65248526326534e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.78969485768769e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.78969485768769e-09!GO:0046034;ATP metabolic process;1.96961627696892e-09!GO:0006793;phosphorus metabolic process;2.79069102602872e-09!GO:0006796;phosphate metabolic process;2.79069102602872e-09!GO:0009141;nucleoside triphosphate metabolic process;2.99961836596968e-09!GO:0044440;endosomal part;3.17872113448466e-09!GO:0010008;endosome membrane;3.17872113448466e-09!GO:0003676;nucleic acid binding;3.43434780428845e-09!GO:0006461;protein complex assembly;3.45804517944743e-09!GO:0008639;small protein conjugating enzyme activity;3.68910638009326e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.25078305387352e-09!GO:0005774;vacuolar membrane;4.26105744455816e-09!GO:0007243;protein kinase cascade;5.44212962565263e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.71196915049773e-09!GO:0043069;negative regulation of programmed cell death;1.0067068886148e-08!GO:0004842;ubiquitin-protein ligase activity;1.04080056106194e-08!GO:0017038;protein import;1.0815315106287e-08!GO:0045333;cellular respiration;1.27430081253362e-08!GO:0043066;negative regulation of apoptosis;1.28703319853136e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.28703319853136e-08!GO:0019787;small conjugating protein ligase activity;1.30119875122518e-08!GO:0005793;ER-Golgi intermediate compartment;1.5586892938476e-08!GO:0016469;proton-transporting two-sector ATPase complex;1.56439973562676e-08!GO:0006916;anti-apoptosis;1.79065911057452e-08!GO:0006091;generation of precursor metabolites and energy;1.85824321064409e-08!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.05305712405697e-08!GO:0005765;lysosomal membrane;2.19361337650272e-08!GO:0044431;Golgi apparatus part;2.92730017265853e-08!GO:0005770;late endosome;3.10934634766497e-08!GO:0044437;vacuolar part;3.40978403895558e-08!GO:0006099;tricarboxylic acid cycle;3.77467677700898e-08!GO:0046356;acetyl-CoA catabolic process;3.77467677700898e-08!GO:0016607;nuclear speck;4.46986361045325e-08!GO:0016310;phosphorylation;5.05573047188871e-08!GO:0006974;response to DNA damage stimulus;5.82700463808146e-08!GO:0016070;RNA metabolic process;6.51990559843033e-08!GO:0006752;group transfer coenzyme metabolic process;8.09947902073511e-08!GO:0006084;acetyl-CoA metabolic process;8.14540082218463e-08!GO:0031965;nuclear membrane;9.20500245342424e-08!GO:0051187;cofactor catabolic process;9.7894847164225e-08!GO:0042254;ribosome biogenesis and assembly;1.079998170948e-07!GO:0007264;small GTPase mediated signal transduction;1.49810331802402e-07!GO:0003712;transcription cofactor activity;1.59646751402416e-07!GO:0009117;nucleotide metabolic process;1.96979033665028e-07!GO:0005525;GTP binding;2.41327642054867e-07!GO:0007005;mitochondrion organization and biogenesis;2.48248664918106e-07!GO:0016881;acid-amino acid ligase activity;2.75474473757505e-07!GO:0031982;vesicle;2.80079010230327e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.87095680561834e-07!GO:0030120;vesicle coat;3.06699922890129e-07!GO:0030662;coated vesicle membrane;3.06699922890129e-07!GO:0044453;nuclear membrane part;3.39038211593268e-07!GO:0007242;intracellular signaling cascade;3.42347860939112e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.83096071396188e-07!GO:0031252;leading edge;3.89126872850963e-07!GO:0009109;coenzyme catabolic process;4.57219478445783e-07!GO:0031988;membrane-bound vesicle;4.99548058364734e-07!GO:0019899;enzyme binding;6.52860923901951e-07!GO:0006399;tRNA metabolic process;8.10483291881963e-07!GO:0050657;nucleic acid transport;1.01009320005286e-06!GO:0051236;establishment of RNA localization;1.01009320005286e-06!GO:0050658;RNA transport;1.01009320005286e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.05634422828052e-06!GO:0031410;cytoplasmic vesicle;1.19058685524317e-06!GO:0007049;cell cycle;1.21016394772622e-06!GO:0016044;membrane organization and biogenesis;1.29630094313231e-06!GO:0006818;hydrogen transport;1.34886335111906e-06!GO:0006403;RNA localization;1.42379385780973e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.44155419015932e-06!GO:0015399;primary active transmembrane transporter activity;1.44155419015932e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.44709486178405e-06!GO:0005643;nuclear pore;1.45921638954777e-06!GO:0065002;intracellular protein transport across a membrane;1.47224369987455e-06!GO:0008047;enzyme activator activity;1.51380126944166e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.51380126944166e-06!GO:0015992;proton transport;1.52841969346144e-06!GO:0048475;coated membrane;1.5663938843079e-06!GO:0030117;membrane coat;1.5663938843079e-06!GO:0051170;nuclear import;1.59837797364446e-06!GO:0004298;threonine endopeptidase activity;1.89735464830382e-06!GO:0005798;Golgi-associated vesicle;1.99397327892256e-06!GO:0003924;GTPase activity;2.04132353011667e-06!GO:0008654;phospholipid biosynthetic process;2.61352299926902e-06!GO:0045259;proton-transporting ATP synthase complex;2.64127421210461e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.64127421210461e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.64127421210461e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.64127421210461e-06!GO:0048523;negative regulation of cellular process;2.66135183379565e-06!GO:0006643;membrane lipid metabolic process;2.96806476595013e-06!GO:0006606;protein import into nucleus;3.09397341134932e-06!GO:0006281;DNA repair;3.97765741896995e-06!GO:0044262;cellular carbohydrate metabolic process;4.0092058534021e-06!GO:0016740;transferase activity;4.54605272403455e-06!GO:0044255;cellular lipid metabolic process;4.90381980894813e-06!GO:0043038;amino acid activation;4.93875345061565e-06!GO:0006418;tRNA aminoacylation for protein translation;4.93875345061565e-06!GO:0043039;tRNA aminoacylation;4.93875345061565e-06!GO:0032561;guanyl ribonucleotide binding;6.11586405166572e-06!GO:0019001;guanyl nucleotide binding;6.11586405166572e-06!GO:0065009;regulation of a molecular function;6.12900816611323e-06!GO:0006950;response to stress;6.15688464511263e-06!GO:0000139;Golgi membrane;7.12558777119178e-06!GO:0008026;ATP-dependent helicase activity;7.86216782039391e-06!GO:0022890;inorganic cation transmembrane transporter activity;8.06886775732657e-06!GO:0006417;regulation of translation;8.4291085628448e-06!GO:0004386;helicase activity;8.94543091651848e-06!GO:0005741;mitochondrial outer membrane;9.43027123472115e-06!GO:0007033;vacuole organization and biogenesis;9.68929107628948e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.73781722657478e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.07649408438565e-05!GO:0046930;pore complex;1.1291784380915e-05!GO:0043492;ATPase activity, coupled to movement of substances;1.14107204538227e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.21602468902599e-05!GO:0048519;negative regulation of biological process;1.24977731502188e-05!GO:0032446;protein modification by small protein conjugation;1.26283064788101e-05!GO:0019752;carboxylic acid metabolic process;1.28788170189759e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;1.39087903529987e-05!GO:0006082;organic acid metabolic process;1.41844722671224e-05!GO:0016567;protein ubiquitination;1.49068819145855e-05!GO:0051028;mRNA transport;1.52230892447193e-05!GO:0009719;response to endogenous stimulus;1.74485419649169e-05!GO:0051726;regulation of cell cycle;1.80792690288476e-05!GO:0000074;regulation of progression through cell cycle;1.83455374156154e-05!GO:0009967;positive regulation of signal transduction;1.99876236447027e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;2.0988979039886e-05!GO:0045454;cell redox homeostasis;2.5663566713054e-05!GO:0003697;single-stranded DNA binding;2.93546069043086e-05!GO:0031902;late endosome membrane;3.19765405590758e-05!GO:0006613;cotranslational protein targeting to membrane;3.20307482133328e-05!GO:0008610;lipid biosynthetic process;3.28438042967009e-05!GO:0030695;GTPase regulator activity;3.28877278047332e-05!GO:0007040;lysosome organization and biogenesis;3.28877278047332e-05!GO:0005096;GTPase activator activity;3.37833829829995e-05!GO:0009165;nucleotide biosynthetic process;3.51352759091923e-05!GO:0031968;organelle outer membrane;3.8771385232186e-05!GO:0019867;outer membrane;3.88696625643348e-05!GO:0009615;response to virus;4.05088765836508e-05!GO:0006650;glycerophospholipid metabolic process;4.82898940914954e-05!GO:0046519;sphingoid metabolic process;5.1563073986206e-05!GO:0006364;rRNA processing;5.19413571056205e-05!GO:0001726;ruffle;5.43153828263103e-05!GO:0043065;positive regulation of apoptosis;5.51769515939181e-05!GO:0000151;ubiquitin ligase complex;5.5181940905246e-05!GO:0006672;ceramide metabolic process;6.13770314219107e-05!GO:0016072;rRNA metabolic process;6.47854125658446e-05!GO:0050794;regulation of cellular process;6.82401774738348e-05!GO:0043068;positive regulation of programmed cell death;8.45533842010605e-05!GO:0005083;small GTPase regulator activity;9.09056287210519e-05!GO:0006612;protein targeting to membrane;9.50995022514723e-05!GO:0043566;structure-specific DNA binding;0.000101139472585743!GO:0045045;secretory pathway;0.000102511186543618!GO:0016564;transcription repressor activity;0.000102511186543618!GO:0006629;lipid metabolic process;0.000106587864232821!GO:0000245;spliceosome assembly;0.000107209575738157!GO:0005769;early endosome;0.000115712985390222!GO:0022402;cell cycle process;0.000124324393324914!GO:0032940;secretion by cell;0.000125978077159316!GO:0005885;Arp2/3 protein complex;0.000125978453934675!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000139524829484166!GO:0016568;chromatin modification;0.000160638347969366!GO:0031326;regulation of cellular biosynthetic process;0.000166115097389106!GO:0046467;membrane lipid biosynthetic process;0.000198307634610909!GO:0007034;vacuolar transport;0.000217891176278095!GO:0051168;nuclear export;0.000220103511270864!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000233268507590168!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000235565681468185!GO:0005762;mitochondrial large ribosomal subunit;0.000235898251932946!GO:0000315;organellar large ribosomal subunit;0.000235898251932946!GO:0015980;energy derivation by oxidation of organic compounds;0.00023653788833423!GO:0030036;actin cytoskeleton organization and biogenesis;0.000241532168387718!GO:0006644;phospholipid metabolic process;0.000244950111035639!GO:0007265;Ras protein signal transduction;0.000261601838517277!GO:0006917;induction of apoptosis;0.000267237118951549!GO:0006897;endocytosis;0.000270003986254228!GO:0010324;membrane invagination;0.000270003986254228!GO:0016853;isomerase activity;0.000288505423098941!GO:0016197;endosome transport;0.000291761429820732!GO:0005788;endoplasmic reticulum lumen;0.000307676875407259!GO:0050790;regulation of catalytic activity;0.000310567544182916!GO:0003729;mRNA binding;0.000310567544182916!GO:0005975;carbohydrate metabolic process;0.000313519437975245!GO:0009889;regulation of biosynthetic process;0.000358303631773135!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000369217756184733!GO:0046483;heterocycle metabolic process;0.000376644592801681!GO:0003714;transcription corepressor activity;0.000377579980398375!GO:0045786;negative regulation of progression through cell cycle;0.00037845641511541!GO:0012502;induction of programmed cell death;0.00039699369668012!GO:0016779;nucleotidyltransferase activity;0.000401642580806664!GO:0006118;electron transport;0.000408789610053929!GO:0003713;transcription coactivator activity;0.000409815541839506!GO:0006366;transcription from RNA polymerase II promoter;0.000409880881590658!GO:0003724;RNA helicase activity;0.00042100154665172!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000444118733041335!GO:0006401;RNA catabolic process;0.00053199884326861!GO:0030658;transport vesicle membrane;0.000534040547371203!GO:0008632;apoptotic program;0.000610648592090289!GO:0006402;mRNA catabolic process;0.00064933151541964!GO:0048522;positive regulation of cellular process;0.000735147647690414!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000754188111349272!GO:0046474;glycerophospholipid biosynthetic process;0.000795257101120357!GO:0043021;ribonucleoprotein binding;0.000819224431415144!GO:0050662;coenzyme binding;0.000822854517847752!GO:0006323;DNA packaging;0.000848972251012366!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000887262707665418!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000887262707665418!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000887262707665418!GO:0005099;Ras GTPase activator activity;0.000926014136136514!GO:0030149;sphingolipid catabolic process;0.000932741538991148!GO:0043087;regulation of GTPase activity;0.00094655434158103!GO:0018193;peptidyl-amino acid modification;0.000957382644977672!GO:0004177;aminopeptidase activity;0.00104045355753409!GO:0030176;integral to endoplasmic reticulum membrane;0.00104299901323319!GO:0030384;phosphoinositide metabolic process;0.0010861060605407!GO:0009966;regulation of signal transduction;0.00112454375434544!GO:0043623;cellular protein complex assembly;0.00114816666455687!GO:0042802;identical protein binding;0.00126170010532091!GO:0030660;Golgi-associated vesicle membrane;0.00145323835242139!GO:0033116;ER-Golgi intermediate compartment membrane;0.00145814346111339!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00151612699733738!GO:0007041;lysosomal transport;0.00151883138900686!GO:0030133;transport vesicle;0.00153806833340856!GO:0006626;protein targeting to mitochondrion;0.00154943645541295!GO:0006767;water-soluble vitamin metabolic process;0.00156234940628642!GO:0006749;glutathione metabolic process;0.00163263190058968!GO:0030029;actin filament-based process;0.00163263190058968!GO:0006839;mitochondrial transport;0.00167578317054622!GO:0002376;immune system process;0.00167592104662926!GO:0030867;rough endoplasmic reticulum membrane;0.00182210365173938!GO:0007006;mitochondrial membrane organization and biogenesis;0.00184045746623111!GO:0019318;hexose metabolic process;0.00184045746623111!GO:0006733;oxidoreduction coenzyme metabolic process;0.00185829733070091!GO:0051789;response to protein stimulus;0.00199605782897815!GO:0006986;response to unfolded protein;0.00199605782897815!GO:0050789;regulation of biological process;0.0020317848441889!GO:0043681;protein import into mitochondrion;0.00216084260470509!GO:0051276;chromosome organization and biogenesis;0.0021729960283296!GO:0015036;disulfide oxidoreductase activity;0.00218938237494928!GO:0051427;hormone receptor binding;0.00229487652374412!GO:0005905;coated pit;0.0023286775550873!GO:0008234;cysteine-type peptidase activity;0.00247240210162608!GO:0005996;monosaccharide metabolic process;0.00247545530019328!GO:0030027;lamellipodium;0.00262116088582093!GO:0019882;antigen processing and presentation;0.00273183239645456!GO:0006607;NLS-bearing substrate import into nucleus;0.00276446815974872!GO:0051920;peroxiredoxin activity;0.00278427688872236!GO:0005048;signal sequence binding;0.0028430502182337!GO:0019843;rRNA binding;0.00284656959115339!GO:0006891;intra-Golgi vesicle-mediated transport;0.0033260759720692!GO:0019377;glycolipid catabolic process;0.00333434398429775!GO:0046489;phosphoinositide biosynthetic process;0.00345440941272238!GO:0005694;chromosome;0.00348072616299778!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00353573886944392!GO:0006769;nicotinamide metabolic process;0.00362836044321356!GO:0006414;translational elongation;0.00368494583089836!GO:0048487;beta-tubulin binding;0.0037247273972913!GO:0008186;RNA-dependent ATPase activity;0.00373229227840055!GO:0048518;positive regulation of biological process;0.00379623104346946!GO:0000314;organellar small ribosomal subunit;0.00386569875074011!GO:0005763;mitochondrial small ribosomal subunit;0.00386569875074011!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00388915401225104!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00390843757293665!GO:0016859;cis-trans isomerase activity;0.00390843757293665!GO:0006740;NADPH regeneration;0.00395223688377242!GO:0006098;pentose-phosphate shunt;0.00395223688377242!GO:0030118;clathrin coat;0.00395223688377242!GO:0035257;nuclear hormone receptor binding;0.00396157576272747!GO:0016126;sterol biosynthetic process;0.00405768312086906!GO:0005791;rough endoplasmic reticulum;0.00408980386531771!GO:0031072;heat shock protein binding;0.00411685543442137!GO:0005667;transcription factor complex;0.00413438341748438!GO:0051336;regulation of hydrolase activity;0.00413438341748438!GO:0022406;membrane docking;0.00413438341748438!GO:0048278;vesicle docking;0.00413438341748438!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00417231653895506!GO:0048471;perinuclear region of cytoplasm;0.0043394892723485!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00436065216726901!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00436065216726901!GO:0005813;centrosome;0.0043958181513548!GO:0051252;regulation of RNA metabolic process;0.00448080465234431!GO:0031901;early endosome membrane;0.00454360033439026!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00456851130599931!GO:0008637;apoptotic mitochondrial changes;0.00463651281440466!GO:0046456;icosanoid biosynthetic process;0.00464394521868253!GO:0006807;nitrogen compound metabolic process;0.00483613902235553!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00483613902235553!GO:0015002;heme-copper terminal oxidase activity;0.00483613902235553!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00483613902235553!GO:0004129;cytochrome-c oxidase activity;0.00483613902235553!GO:0006635;fatty acid beta-oxidation;0.00500767726672702!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00512884756087417!GO:0006665;sphingolipid metabolic process;0.00529231840412835!GO:0006518;peptide metabolic process;0.00536606633715324!GO:0016563;transcription activator activity;0.00539102885320258!GO:0006066;alcohol metabolic process;0.00574441983012806!GO:0048468;cell development;0.00574441983012806!GO:0051287;NAD binding;0.00581526576608582!GO:0006904;vesicle docking during exocytosis;0.00590424456481777!GO:0030984;kininogen binding;0.00614766215633722!GO:0004213;cathepsin B activity;0.00614766215633722!GO:0046479;glycosphingolipid catabolic process;0.00644408719168767!GO:0006007;glucose catabolic process;0.00655597618800257!GO:0017166;vinculin binding;0.006563668885349!GO:0006778;porphyrin metabolic process;0.00658531282460426!GO:0033013;tetrapyrrole metabolic process;0.00658531282460426!GO:0004197;cysteine-type endopeptidase activity;0.00664340833226761!GO:0030663;COPI coated vesicle membrane;0.00684811130902389!GO:0030126;COPI vesicle coat;0.00684811130902389!GO:0019362;pyridine nucleotide metabolic process;0.00684811130902389!GO:0022415;viral reproductive process;0.00690526640546427!GO:0032318;regulation of Ras GTPase activity;0.00695992863497945!GO:0043488;regulation of mRNA stability;0.00697154638500773!GO:0043487;regulation of RNA stability;0.00697154638500773!GO:0048500;signal recognition particle;0.00725517306440177!GO:0000096;sulfur amino acid metabolic process;0.0072581922959356!GO:0007050;cell cycle arrest;0.00726732946561626!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00748714964940342!GO:0042613;MHC class II protein complex;0.00765226246784828!GO:0006633;fatty acid biosynthetic process;0.00797313782796584!GO:0051540;metal cluster binding;0.00808173639784004!GO:0051536;iron-sulfur cluster binding;0.00808173639784004!GO:0006979;response to oxidative stress;0.00855031958241893!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00861014048589181!GO:0000287;magnesium ion binding;0.00877770834454717!GO:0004576;oligosaccharyl transferase activity;0.00894375212951815!GO:0004004;ATP-dependent RNA helicase activity;0.00903717316990218!GO:0030125;clathrin vesicle coat;0.00909677765331368!GO:0030665;clathrin coated vesicle membrane;0.00909677765331368!GO:0006465;signal peptide processing;0.00921304885908958!GO:0006509;membrane protein ectodomain proteolysis;0.00924989110230911!GO:0033619;membrane protein proteolysis;0.00924989110230911!GO:0008287;protein serine/threonine phosphatase complex;0.00924989110230911!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00933638598352204!GO:0043300;regulation of leukocyte degranulation;0.0093367241649051!GO:0042168;heme metabolic process;0.00936286430473913!GO:0033673;negative regulation of kinase activity;0.00938402325183115!GO:0006469;negative regulation of protein kinase activity;0.00938402325183115!GO:0009112;nucleobase metabolic process;0.00960993408673286!GO:0006333;chromatin assembly or disassembly;0.00969441901310325!GO:0030137;COPI-coated vesicle;0.00983471901093786!GO:0005815;microtubule organizing center;0.00984651647361842!GO:0046466;membrane lipid catabolic process;0.0100713984438024!GO:0030132;clathrin coat of coated pit;0.0104343055075745!GO:0051348;negative regulation of transferase activity;0.0104645288183035!GO:0043304;regulation of mast cell degranulation;0.0104948061170739!GO:0006383;transcription from RNA polymerase III promoter;0.0107243804480161!GO:0048037;cofactor binding;0.0107243804480161!GO:0005777;peroxisome;0.0107243804480161!GO:0042579;microbody;0.0107243804480161!GO:0030134;ER to Golgi transport vesicle;0.0107243804480161!GO:0006516;glycoprotein catabolic process;0.0107927281157336!GO:0006955;immune response;0.010897655458561!GO:0006631;fatty acid metabolic process;0.0109590287807307!GO:0004185;serine carboxypeptidase activity;0.0112794593608881!GO:0030127;COPII vesicle coat;0.0112794593608881!GO:0012507;ER to Golgi transport vesicle membrane;0.0112794593608881!GO:0030145;manganese ion binding;0.0116201101999929!GO:0030119;AP-type membrane coat adaptor complex;0.0117097819876923!GO:0003690;double-stranded DNA binding;0.011726364172375!GO:0008250;oligosaccharyl transferase complex;0.0119104309900966!GO:0031324;negative regulation of cellular metabolic process;0.0123664999418771!GO:0030140;trans-Golgi network transport vesicle;0.0125273479862849!GO:0008139;nuclear localization sequence binding;0.0126901948654948!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0127321033446948!GO:0045047;protein targeting to ER;0.0127321033446948!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.012767306883007!GO:0002819;regulation of adaptive immune response;0.012767306883007!GO:0032787;monocarboxylic acid metabolic process;0.0127975133876165!GO:0006260;DNA replication;0.0129774872321343!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0133113399388109!GO:0005684;U2-dependent spliceosome;0.0137363796313449!GO:0051219;phosphoprotein binding;0.0140828511792222!GO:0000209;protein polyubiquitination;0.0142124479817342!GO:0046394;carboxylic acid biosynthetic process;0.0142124479817342!GO:0016053;organic acid biosynthetic process;0.0142124479817342!GO:0016408;C-acyltransferase activity;0.0144245805848493!GO:0006520;amino acid metabolic process;0.0145764034970619!GO:0031301;integral to organelle membrane;0.0145983452884154!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0149394856183345!GO:0051539;4 iron, 4 sulfur cluster binding;0.015371990652266!GO:0009308;amine metabolic process;0.0154651683780782!GO:0045309;protein phosphorylated amino acid binding;0.0155893237134445!GO:0046983;protein dimerization activity;0.0158893368209108!GO:0015923;mannosidase activity;0.0159935056567358!GO:0048002;antigen processing and presentation of peptide antigen;0.0160216860200887!GO:0000278;mitotic cell cycle;0.0165649448934379!GO:0006458;'de novo' protein folding;0.0166420313029206!GO:0051084;'de novo' posttranslational protein folding;0.0166420313029206!GO:0016791;phosphoric monoester hydrolase activity;0.0166420313029206!GO:0030041;actin filament polymerization;0.0167777246864235!GO:0030131;clathrin adaptor complex;0.0168022253678594!GO:0044427;chromosomal part;0.0168168477688067!GO:0000059;protein import into nucleus, docking;0.0168182944040194!GO:0065004;protein-DNA complex assembly;0.0171239475061977!GO:0004722;protein serine/threonine phosphatase activity;0.0171780582943028!GO:0007259;JAK-STAT cascade;0.0173890408028873!GO:0006914;autophagy;0.0175050193844822!GO:0019904;protein domain specific binding;0.017760879846953!GO:0032428;beta-N-acetylgalactosaminidase activity;0.0177708845441479!GO:0030290;sphingolipid activator protein activity;0.0177708845441479!GO:0046822;regulation of nucleocytoplasmic transport;0.0178663872418382!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0182625349726444!GO:0005869;dynactin complex;0.0182625349726444!GO:0012506;vesicle membrane;0.0185680543682438!GO:0006405;RNA export from nucleus;0.0186646484397626!GO:0006611;protein export from nucleus;0.0189703349578791!GO:0006622;protein targeting to lysosome;0.0191489993667317!GO:0006689;ganglioside catabolic process;0.0193453654584568!GO:0006006;glucose metabolic process;0.0194575563568096!GO:0006695;cholesterol biosynthetic process;0.0200158722702561!GO:0046426;negative regulation of JAK-STAT cascade;0.0204111698891341!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0204570781282403!GO:0042987;amyloid precursor protein catabolic process;0.0204936218778906!GO:0047485;protein N-terminus binding;0.0206850043104825!GO:0009892;negative regulation of metabolic process;0.0208543258255325!GO:0004214;dipeptidyl-peptidase I activity;0.0210340087263164!GO:0003711;transcription elongation regulator activity;0.0215211060499592!GO:0018196;peptidyl-asparagine modification;0.021752099514379!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.021752099514379!GO:0046164;alcohol catabolic process;0.022200470642878!GO:0000339;RNA cap binding;0.0224241582030143!GO:0000785;chromatin;0.022858908155577!GO:0008312;7S RNA binding;0.0233660126551322!GO:0044438;microbody part;0.0235719944952185!GO:0044439;peroxisomal part;0.0235719944952185!GO:0005758;mitochondrial intermembrane space;0.0238610481154035!GO:0043022;ribosome binding;0.0238687573280422!GO:0035035;histone acetyltransferase binding;0.0242188197111595!GO:0004300;enoyl-CoA hydratase activity;0.024468210965849!GO:0016788;hydrolase activity, acting on ester bonds;0.0245843885552324!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0248949803025855!GO:0001784;phosphotyrosine binding;0.0249753526067607!GO:0000049;tRNA binding;0.0251003592836267!GO:0045576;mast cell activation;0.025267038108722!GO:0030508;thiol-disulfide exchange intermediate activity;0.0256283011170158!GO:0019079;viral genome replication;0.0259095633520125!GO:0006739;NADP metabolic process;0.0259606770594302!GO:0005057;receptor signaling protein activity;0.026400703557679!GO:0004518;nuclease activity;0.0264590772023232!GO:0030503;regulation of cell redox homeostasis;0.0271245007970445!GO:0050811;GABA receptor binding;0.0271595621238058!GO:0005637;nuclear inner membrane;0.0272694731581545!GO:0044275;cellular carbohydrate catabolic process;0.0272935943135569!GO:0006595;polyamine metabolic process;0.0274128925797957!GO:0008320;protein transmembrane transporter activity;0.0278315347535857!GO:0046365;monosaccharide catabolic process;0.0283228289346549!GO:0030659;cytoplasmic vesicle membrane;0.0283646731095558!GO:0006779;porphyrin biosynthetic process;0.0283669345950091!GO:0033014;tetrapyrrole biosynthetic process;0.0283669345950091!GO:0004563;beta-N-acetylhexosaminidase activity;0.0284994579258018!GO:0004448;isocitrate dehydrogenase activity;0.0288081299306254!GO:0031625;ubiquitin protein ligase binding;0.0288081299306254!GO:0004192;cathepsin D activity;0.0288081299306254!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0291627256335227!GO:0042158;lipoprotein biosynthetic process;0.0294305961904261!GO:0006497;protein amino acid lipidation;0.0295072960174759!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0295336381252042!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0295336381252042!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0295336381252042!GO:0044433;cytoplasmic vesicle part;0.0295336381252042!GO:0015035;protein disulfide oxidoreductase activity;0.0302535267925853!GO:0065007;biological regulation;0.0305017588737866!GO:0006790;sulfur metabolic process;0.0305985565157818!GO:0008033;tRNA processing;0.0306799158789121!GO:0043284;biopolymer biosynthetic process;0.0310992358717855!GO:0003899;DNA-directed RNA polymerase activity;0.0315960963827657!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0323675863918163!GO:0030880;RNA polymerase complex;0.0331848274908872!GO:0009081;branched chain family amino acid metabolic process;0.0335788035459862!GO:0051235;maintenance of localization;0.0339757123942967!GO:0009100;glycoprotein metabolic process;0.0340360237686033!GO:0005784;translocon complex;0.0340369488410215!GO:0000118;histone deacetylase complex;0.0340369488410215!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0341603743801662!GO:0008629;induction of apoptosis by intracellular signals;0.0341603743801662!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0341978730374172!GO:0010257;NADH dehydrogenase complex assembly;0.0341978730374172!GO:0033108;mitochondrial respiratory chain complex assembly;0.0341978730374172!GO:0032763;regulation of mast cell cytokine production;0.0343150567166244!GO:0032762;mast cell cytokine production;0.0343150567166244!GO:0030099;myeloid cell differentiation;0.0343224147879184!GO:0051338;regulation of transferase activity;0.0344232686608224!GO:0006310;DNA recombination;0.034764393532088!GO:0051881;regulation of mitochondrial membrane potential;0.034764393532088!GO:0015631;tubulin binding;0.0347668290974475!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0348244093786864!GO:0031970;organelle envelope lumen;0.0348339965462483!GO:0031903;microbody membrane;0.0348339965462483!GO:0005778;peroxisomal membrane;0.0348339965462483!GO:0000303;response to superoxide;0.0349457935331344!GO:0016860;intramolecular oxidoreductase activity;0.0352406783156882!GO:0016125;sterol metabolic process;0.0352804989300002!GO:0016251;general RNA polymerase II transcription factor activity;0.0352804989300002!GO:0005832;chaperonin-containing T-complex;0.0352811189578295!GO:0051056;regulation of small GTPase mediated signal transduction;0.0358525053812306!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0362619371628366!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0364389943476612!GO:0051087;chaperone binding;0.0364389943476612!GO:0043306;positive regulation of mast cell degranulation;0.0364389943476612!GO:0045921;positive regulation of exocytosis;0.0364389943476612!GO:0043302;positive regulation of leukocyte degranulation;0.0364389943476612!GO:0015929;hexosaminidase activity;0.0364389943476612!GO:0001516;prostaglandin biosynthetic process;0.0370357685343029!GO:0046457;prostanoid biosynthetic process;0.0370357685343029!GO:0008624;induction of apoptosis by extracellular signals;0.0371900976857712!GO:0004674;protein serine/threonine kinase activity;0.0382929481557068!GO:0044452;nucleolar part;0.0383298977637026!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0387977425612549!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0388521415395655!GO:0006302;double-strand break repair;0.0389831060051952!GO:0043299;leukocyte degranulation;0.0391619162644513!GO:0035258;steroid hormone receptor binding;0.0392059708754819!GO:0019320;hexose catabolic process;0.0392059708754819!GO:0033367;protein localization in mast cell secretory granule;0.0392059708754819!GO:0033365;protein localization in organelle;0.0392059708754819!GO:0033371;T cell secretory granule organization and biogenesis;0.0392059708754819!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0392059708754819!GO:0033375;protease localization in T cell secretory granule;0.0392059708754819!GO:0042629;mast cell granule;0.0392059708754819!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0392059708754819!GO:0033364;mast cell secretory granule organization and biogenesis;0.0392059708754819!GO:0033380;granzyme B localization in T cell secretory granule;0.0392059708754819!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0392059708754819!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0392059708754819!GO:0033368;protease localization in mast cell secretory granule;0.0392059708754819!GO:0033366;protein localization in secretory granule;0.0392059708754819!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0392059708754819!GO:0033374;protein localization in T cell secretory granule;0.0392059708754819!GO:0008538;proteasome activator activity;0.0398233068159254!GO:0006783;heme biosynthetic process;0.040059426436447!GO:0009116;nucleoside metabolic process;0.0402301407232727!GO:0009110;vitamin biosynthetic process;0.0407468754631606!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0408296909515982!GO:0019863;IgE binding;0.0409965533003978!GO:0015630;microtubule cytoskeleton;0.0410291306499335!GO:0042253;granulocyte macrophage colony-stimulating factor biosynthetic process;0.0413054264582454!GO:0032604;granulocyte macrophage colony-stimulating factor production;0.0413054264582454!GO:0006352;transcription initiation;0.0422272371601361!GO:0001836;release of cytochrome c from mitochondria;0.0425232415295845!GO:0043506;regulation of JNK activity;0.0426249160991765!GO:0050749;apolipoprotein E receptor binding;0.0426692660004917!GO:0003725;double-stranded RNA binding;0.0435557947389995!GO:0006506;GPI anchor biosynthetic process;0.0435725358985867!GO:0001573;ganglioside metabolic process;0.0440222283534686!GO:0051085;chaperone cofactor-dependent protein folding;0.0440222283534686!GO:0031349;positive regulation of defense response;0.0441873090466269!GO:0050729;positive regulation of inflammatory response;0.0441873090466269!GO:0046578;regulation of Ras protein signal transduction;0.0445315182408304!GO:0006013;mannose metabolic process;0.0447679956432051!GO:0031529;ruffle organization and biogenesis;0.0449746191777254!GO:0030911;TPR domain binding;0.0451991065617094!GO:0016481;negative regulation of transcription;0.0461408492887157!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0472398078886029!GO:0004860;protein kinase inhibitor activity;0.0472398078886029!GO:0042611;MHC protein complex;0.0472795726903247!GO:0051092;activation of NF-kappaB transcription factor;0.0473676119876289!GO:0016363;nuclear matrix;0.0476568822635565!GO:0000305;response to oxygen radical;0.0478691773630571!GO:0019058;viral infectious cycle;0.0480361444960859!GO:0033033;negative regulation of myeloid cell apoptosis;0.0480361444960859!GO:0001803;regulation of type III hypersensitivity;0.0480361444960859!GO:0032733;positive regulation of interleukin-10 production;0.0480361444960859!GO:0033025;regulation of mast cell apoptosis;0.0480361444960859!GO:0001805;positive regulation of type III hypersensitivity;0.0480361444960859!GO:0033023;mast cell homeostasis;0.0480361444960859!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0480361444960859!GO:0033032;regulation of myeloid cell apoptosis;0.0480361444960859!GO:0001802;type III hypersensitivity;0.0480361444960859!GO:0033028;myeloid cell apoptosis;0.0480361444960859!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0480361444960859!GO:0033026;negative regulation of mast cell apoptosis;0.0480361444960859!GO:0033024;mast cell apoptosis;0.0480361444960859!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0487281197559076!GO:0000428;DNA-directed RNA polymerase complex;0.0487281197559076!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0487281197559076!GO:0012510;trans-Golgi network transport vesicle membrane;0.0487281197559076!GO:0060090;molecular adaptor activity;0.0488545360834167!GO:0043126;regulation of 1-phosphatidylinositol 4-kinase activity;0.0494318678228487!GO:0046813;virion attachment, binding of host cell surface receptor;0.0494318678228487!GO:0043128;positive regulation of 1-phosphatidylinositol 4-kinase activity;0.0494318678228487!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.049657218078072!GO:0016311;dephosphorylation;0.0497584664946368
 
|sample_id=11384
 
|sample_id=11384
 
|sample_note=
 
|sample_note=
Line 76: Line 105:
 
|sample_tissue=blood
 
|sample_tissue=blood
 
|top_motifs=TLX2:2.41080619267;FOXP3:2.28708409989;SREBF1,2:1.81946799347;ESRRA:1.64666076189;SPI1:1.26950237975;IRF7:1.20592347616;ESR1:1.15988234441;STAT1,3:0.999881764101;SPIB:0.999486858799;NANOG{mouse}:0.988475758512;NR6A1:0.982627504848;ARID5B:0.979385615915;NKX2-2,8:0.893419190991;IKZF2:0.779137590521;PAX5:0.775693153857;ETS1,2:0.768546703555;ELF1,2,4:0.747716907612;EN1,2:0.708635538627;TFCP2:0.703737041248;NFE2L2:0.702810610616;FOXD3:0.679570497005;STAT2,4,6:0.676788465209;IRF1,2:0.655916484006;ALX1:0.648719379131;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.635976243657;MYOD1:0.578847308981;SPZ1:0.567990735529;STAT5{A,B}:0.561565456412;EP300:0.530405193212;ZBTB16:0.479656665817;RXRA_VDR{dimer}:0.461122919727;GLI1..3:0.431060799912;DMAP1_NCOR{1,2}_SMARC:0.429065040517;PPARG:0.422050608107;RORA:0.375135004256;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.344937594095;PAX2:0.341575242078;HES1:0.327401163864;AR:0.239684403317;GZF1:0.233293987423;NFIL3:0.206441798222;SMAD1..7,9:0.206257772901;NFE2L1:0.189266899813;HMGA1,2:0.174022654968;NKX3-2:0.156669225454;LMO2:0.15074459158;HLF:0.145186096968;HNF4A_NR2F1,2:0.137183562652;FOXQ1:0.128744745697;TGIF1:0.0957802024534;FOSL2:0.0667953299588;PAX6:0.0503645833249;ZNF148:0.0438913778832;XCPE1{core}:0.0388768111454;RUNX1..3:0.0371279615064;TOPORS:0.036008578546;VSX1,2:0.0126950983801;HOXA9_MEIS1:0.00860364134785;NFKB1_REL_RELA:0.00263844632853;MTF1:-0.0115532678842;TFAP4:-0.0271665093254;YY1:-0.0412890226981;FOXA2:-0.060918585613;UFEwm:-0.0620096985179;TEF:-0.0705001478553;MYFfamily:-0.0738322216883;FOXN1:-0.0773014028768;NKX6-1,2:-0.0775059791065;OCT4_SOX2{dimer}:-0.0790257076237;ATF2:-0.0825410947588;TFAP2{A,C}:-0.105122984636;NFE2:-0.107787017602;PAX8:-0.116707239842;EGR1..3:-0.132308314699;EBF1:-0.146357120452;CDX1,2,4:-0.161043993511;PAX1,9:-0.161571142148;ZBTB6:-0.171424899405;ONECUT1,2:-0.175541244621;FOXP1:-0.200364723944;SP1:-0.202081969488;GATA6:-0.209818707494;ZEB1:-0.210936210362;ATF5_CREB3:-0.212886737705;XBP1:-0.229758876039;NHLH1,2:-0.243318824371;HAND1,2:-0.245765635079;KLF4:-0.263645269709;PAX4:-0.291558615581;CUX2:-0.298812913083;ZFP161:-0.305440630704;HSF1,2:-0.309890694972;HIC1:-0.315476861396;MYB:-0.317466029844;GCM1,2:-0.317602905638;POU3F1..4:-0.328122478923;POU5F1:-0.350591927889;NKX2-3_NKX2-5:-0.36047231092;RFX2..5_RFXANK_RFXAP:-0.378348529845;FOS_FOS{B,L1}_JUN{B,D}:-0.394385385069;FOXO1,3,4:-0.398773475531;BACH2:-0.401089121935;HOX{A4,D4}:-0.402998231789;NR5A1,2:-0.40960799949;SRF:-0.429236929919;TFAP2B:-0.433365310772;TBP:-0.437331203675;SNAI1..3:-0.470094849825;FOX{D1,D2}:-0.472725832037;HNF1A:-0.480818433353;BPTF:-0.481866856187;PITX1..3:-0.482916707144;NR3C1:-0.485049377507;PRDM1:-0.490987319465;LHX3,4:-0.49315824057;HOX{A6,A7,B6,B7}:-0.498275641923;PRRX1,2:-0.509890191413;PDX1:-0.510708655422;TAL1_TCF{3,4,12}:-0.516752109684;GFI1B:-0.533356071861;CEBPA,B_DDIT3:-0.533894933401;MYBL2:-0.542709166969;MAFB:-0.543121012466;GTF2A1,2:-0.555575792351;MTE{core}:-0.570330976439;POU6F1:-0.577909859649;ELK1,4_GABP{A,B1}:-0.584433353178;ZNF143:-0.586031350302;MEF2{A,B,C,D}:-0.618458158202;EVI1:-0.627292223156;ATF4:-0.629977992477;HMX1:-0.644417402557;PAX3,7:-0.665316373738;HIF1A:-0.671312993022;FOX{F1,F2,J1}:-0.683074614877;TP53:-0.686514820115;CRX:-0.690741671904;REST:-0.692202253777;POU1F1:-0.694192968685;NRF1:-0.703098635744;SOX2:-0.707033835606;FOXM1:-0.708444127766;ZNF423:-0.719455644068;NR1H4:-0.724071816025;RREB1:-0.729102271079;AIRE:-0.732984016873;MAZ:-0.815808276742;AHR_ARNT_ARNT2:-0.84199681877;TEAD1:-0.863378144303;NFIX:-0.864728472009;NFY{A,B,C}:-0.865209352463;ALX4:-0.872550122273;GATA4:-0.882205618108;bHLH_family:-0.882375354301;FOX{I1,J2}:-0.922721125749;GTF2I:-0.945165394346;RXR{A,B,G}:-0.954493160673;MED-1{core}:-0.963056181842;T:-0.966091427633;ATF6:-0.971483757748;TLX1..3_NFIC{dimer}:-1.00400671191;HBP1_HMGB_SSRP1_UBTF:-1.00893922402;TFDP1:-1.03586373411;JUN:-1.07682848849;CDC5L:-1.09143126611;BREu{core}:-1.09408612269;GFI1:-1.1024859555;IKZF1:-1.12085750816;ADNP_IRX_SIX_ZHX:-1.14909514727;E2F1..5:-1.193344834;PATZ1:-1.22779027566;POU2F1..3:-1.26200567289;SOX{8,9,10}:-1.26891136429;ZIC1..3:-1.28344529338;NANOG:-1.30265345492;CREB1:-1.31700838799;SOX5:-1.3188165851;NKX3-1:-1.38483468966;SOX17:-1.41287134166;HOX{A5,B5}:-1.41908295773;NFATC1..3:-1.46904054388;ZNF384:-1.52605314112;TBX4,5:-1.54370925084;ZNF238:-1.59402025182;FOXL1:-1.62369895587;MZF1:-1.6375563285;RFX1:-1.6409906535;PBX1:-1.66751691547;LEF1_TCF7_TCF7L1,2:-1.70981074177;DBP:-1.80998328773;RBPJ:-2.14288804547;NKX2-1,4:-2.33859231174
 
|top_motifs=TLX2:2.41080619267;FOXP3:2.28708409989;SREBF1,2:1.81946799347;ESRRA:1.64666076189;SPI1:1.26950237975;IRF7:1.20592347616;ESR1:1.15988234441;STAT1,3:0.999881764101;SPIB:0.999486858799;NANOG{mouse}:0.988475758512;NR6A1:0.982627504848;ARID5B:0.979385615915;NKX2-2,8:0.893419190991;IKZF2:0.779137590521;PAX5:0.775693153857;ETS1,2:0.768546703555;ELF1,2,4:0.747716907612;EN1,2:0.708635538627;TFCP2:0.703737041248;NFE2L2:0.702810610616;FOXD3:0.679570497005;STAT2,4,6:0.676788465209;IRF1,2:0.655916484006;ALX1:0.648719379131;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.635976243657;MYOD1:0.578847308981;SPZ1:0.567990735529;STAT5{A,B}:0.561565456412;EP300:0.530405193212;ZBTB16:0.479656665817;RXRA_VDR{dimer}:0.461122919727;GLI1..3:0.431060799912;DMAP1_NCOR{1,2}_SMARC:0.429065040517;PPARG:0.422050608107;RORA:0.375135004256;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.344937594095;PAX2:0.341575242078;HES1:0.327401163864;AR:0.239684403317;GZF1:0.233293987423;NFIL3:0.206441798222;SMAD1..7,9:0.206257772901;NFE2L1:0.189266899813;HMGA1,2:0.174022654968;NKX3-2:0.156669225454;LMO2:0.15074459158;HLF:0.145186096968;HNF4A_NR2F1,2:0.137183562652;FOXQ1:0.128744745697;TGIF1:0.0957802024534;FOSL2:0.0667953299588;PAX6:0.0503645833249;ZNF148:0.0438913778832;XCPE1{core}:0.0388768111454;RUNX1..3:0.0371279615064;TOPORS:0.036008578546;VSX1,2:0.0126950983801;HOXA9_MEIS1:0.00860364134785;NFKB1_REL_RELA:0.00263844632853;MTF1:-0.0115532678842;TFAP4:-0.0271665093254;YY1:-0.0412890226981;FOXA2:-0.060918585613;UFEwm:-0.0620096985179;TEF:-0.0705001478553;MYFfamily:-0.0738322216883;FOXN1:-0.0773014028768;NKX6-1,2:-0.0775059791065;OCT4_SOX2{dimer}:-0.0790257076237;ATF2:-0.0825410947588;TFAP2{A,C}:-0.105122984636;NFE2:-0.107787017602;PAX8:-0.116707239842;EGR1..3:-0.132308314699;EBF1:-0.146357120452;CDX1,2,4:-0.161043993511;PAX1,9:-0.161571142148;ZBTB6:-0.171424899405;ONECUT1,2:-0.175541244621;FOXP1:-0.200364723944;SP1:-0.202081969488;GATA6:-0.209818707494;ZEB1:-0.210936210362;ATF5_CREB3:-0.212886737705;XBP1:-0.229758876039;NHLH1,2:-0.243318824371;HAND1,2:-0.245765635079;KLF4:-0.263645269709;PAX4:-0.291558615581;CUX2:-0.298812913083;ZFP161:-0.305440630704;HSF1,2:-0.309890694972;HIC1:-0.315476861396;MYB:-0.317466029844;GCM1,2:-0.317602905638;POU3F1..4:-0.328122478923;POU5F1:-0.350591927889;NKX2-3_NKX2-5:-0.36047231092;RFX2..5_RFXANK_RFXAP:-0.378348529845;FOS_FOS{B,L1}_JUN{B,D}:-0.394385385069;FOXO1,3,4:-0.398773475531;BACH2:-0.401089121935;HOX{A4,D4}:-0.402998231789;NR5A1,2:-0.40960799949;SRF:-0.429236929919;TFAP2B:-0.433365310772;TBP:-0.437331203675;SNAI1..3:-0.470094849825;FOX{D1,D2}:-0.472725832037;HNF1A:-0.480818433353;BPTF:-0.481866856187;PITX1..3:-0.482916707144;NR3C1:-0.485049377507;PRDM1:-0.490987319465;LHX3,4:-0.49315824057;HOX{A6,A7,B6,B7}:-0.498275641923;PRRX1,2:-0.509890191413;PDX1:-0.510708655422;TAL1_TCF{3,4,12}:-0.516752109684;GFI1B:-0.533356071861;CEBPA,B_DDIT3:-0.533894933401;MYBL2:-0.542709166969;MAFB:-0.543121012466;GTF2A1,2:-0.555575792351;MTE{core}:-0.570330976439;POU6F1:-0.577909859649;ELK1,4_GABP{A,B1}:-0.584433353178;ZNF143:-0.586031350302;MEF2{A,B,C,D}:-0.618458158202;EVI1:-0.627292223156;ATF4:-0.629977992477;HMX1:-0.644417402557;PAX3,7:-0.665316373738;HIF1A:-0.671312993022;FOX{F1,F2,J1}:-0.683074614877;TP53:-0.686514820115;CRX:-0.690741671904;REST:-0.692202253777;POU1F1:-0.694192968685;NRF1:-0.703098635744;SOX2:-0.707033835606;FOXM1:-0.708444127766;ZNF423:-0.719455644068;NR1H4:-0.724071816025;RREB1:-0.729102271079;AIRE:-0.732984016873;MAZ:-0.815808276742;AHR_ARNT_ARNT2:-0.84199681877;TEAD1:-0.863378144303;NFIX:-0.864728472009;NFY{A,B,C}:-0.865209352463;ALX4:-0.872550122273;GATA4:-0.882205618108;bHLH_family:-0.882375354301;FOX{I1,J2}:-0.922721125749;GTF2I:-0.945165394346;RXR{A,B,G}:-0.954493160673;MED-1{core}:-0.963056181842;T:-0.966091427633;ATF6:-0.971483757748;TLX1..3_NFIC{dimer}:-1.00400671191;HBP1_HMGB_SSRP1_UBTF:-1.00893922402;TFDP1:-1.03586373411;JUN:-1.07682848849;CDC5L:-1.09143126611;BREu{core}:-1.09408612269;GFI1:-1.1024859555;IKZF1:-1.12085750816;ADNP_IRX_SIX_ZHX:-1.14909514727;E2F1..5:-1.193344834;PATZ1:-1.22779027566;POU2F1..3:-1.26200567289;SOX{8,9,10}:-1.26891136429;ZIC1..3:-1.28344529338;NANOG:-1.30265345492;CREB1:-1.31700838799;SOX5:-1.3188165851;NKX3-1:-1.38483468966;SOX17:-1.41287134166;HOX{A5,B5}:-1.41908295773;NFATC1..3:-1.46904054388;ZNF384:-1.52605314112;TBX4,5:-1.54370925084;ZNF238:-1.59402025182;FOXL1:-1.62369895587;MZF1:-1.6375563285;RFX1:-1.6409906535;PBX1:-1.66751691547;LEF1_TCF7_TCF7L1,2:-1.70981074177;DBP:-1.80998328773;RBPJ:-2.14288804547;NKX2-1,4:-2.33859231174
 +
|xref=
 +
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11384-118B7;search_select_hide=table117:FF:11384-118B7
 
}}
 
}}

Latest revision as of 08:56, 4 June 2020

Name:Dendritic Cells - monocyte immature derived, donor3
Species:Human (Homo sapiens)
Library ID:CNhs12000
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stage65 years old adult
sexmale
age65
cell typedendritic cell, myeloid, immature
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberDC722
catalog number3H100-70-5
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00006016
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12000 CAGE DRX008214 DRR009086
Accession ID Hg19

Library idBAMCTSS
CNhs12000 DRZ000511 DRZ001896
Accession ID Hg38

Library idBAMCTSS
CNhs12000 DRZ011861 DRZ013246
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00006016
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10002.GTGGCC sRNA-Seq DRX037007 DRR041373
Accession ID Hg19

Library idBAMCTSS
SRhi10002.GTGGCC DRZ007015


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.144
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.0616
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.35
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.0542
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.579
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0542
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0.579
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0528
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0335
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.145
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage1.256
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0542
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.29
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.493
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0542
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.537
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.447
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.187
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD84.207907e-5
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0585
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0542
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.561
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0.102
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.972
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.636
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.341
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0.895
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.221
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0.0542
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.0542
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.194
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.629
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.0271
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12000

Jaspar motifP-value
MA0002.20.0274
MA0003.10.0908
MA0004.10.486
MA0006.10.422
MA0007.10.261
MA0009.10.264
MA0014.10.255
MA0017.19.37662e-4
MA0018.23.51345e-4
MA0019.10.756
MA0024.16.24789e-4
MA0025.10.021
MA0027.10.686
MA0028.10.53
MA0029.10.805
MA0030.10.00815
MA0031.10.0574
MA0035.20.626
MA0038.10.00782
MA0039.20.167
MA0040.10.43
MA0041.10.114
MA0042.10.51
MA0043.10.00734
MA0046.10.268
MA0047.20.586
MA0048.10.869
MA0050.10.00616
MA0051.10.067
MA0052.10.302
MA0055.10.695
MA0057.10.257
MA0058.10.127
MA0059.10.239
MA0060.15.34439e-7
MA0061.10.171
MA0062.20.0498
MA0065.20.00325
MA0066.10.191
MA0067.10.686
MA0068.10.00196
MA0069.10.189
MA0070.10.466
MA0071.10.0557
MA0072.10.486
MA0073.10.486
MA0074.10.26
MA0076.10.338
MA0077.10.164
MA0078.10.324
MA0079.20.216
MA0080.26.06821e-16
MA0081.10.0031
MA0083.10.432
MA0084.10.0147
MA0087.10.311
MA0088.10.314
MA0090.10.0561
MA0091.10.194
MA0092.10.219
MA0093.10.441
MA0099.20.899
MA0100.10.809
MA0101.10.882
MA0102.20.684
MA0103.10.261
MA0104.21
MA0105.10.0419
MA0106.10.629
MA0107.11
MA0108.24.24775e-7
MA0111.10.323
MA0112.27.61366e-5
MA0113.10.108
MA0114.10.0167
MA0115.10.415
MA0116.14.77151e-4
MA0117.10.822
MA0119.10.688
MA0122.10.295
MA0124.10.495
MA0125.10.338
MA0131.10.463
MA0135.10.173
MA0136.12.96979e-12
MA0137.20.0198
MA0138.20.887
MA0139.10.348
MA0140.10.474
MA0141.10.00132
MA0142.10.967
MA0143.10.849
MA0144.10.0361
MA0145.10.0686
MA0146.10.0126
MA0147.10.942
MA0148.10.289
MA0149.10.177
MA0150.10.126
MA0152.10.106
MA0153.10.0299
MA0154.10.00558
MA0155.10.659
MA0156.17.63104e-5
MA0157.10.385
MA0159.10.012
MA0160.10.00458
MA0162.10.46
MA0163.11.20757e-4
MA0164.10.903
MA0258.10.0018
MA0259.10.503



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12000

Novel motifP-value
10.0319
100.035
1000.76
1010.162
1020.541
1030.104
1040.244
1050.649
1060.00737
1070.176
1080.849
1090.0178
110.0448
1100.166
1110.008
1120.0202
1130.609
1140.00333
1150.67
1160.354
1170.0426
1180.348
1190.0193
120.403
1200.189
1210.84
1220.397
1230.225
1240.545
1250.337
1260.393
1270.0939
1280.0258
1290.431
130.0936
1300.484
1310.703
1320.875
1330.885
1340.669
1350.0126
1360.195
1370.114
1380.336
1390.0412
140.273
1400.123
1410.982
1420.464
1430.108
1440.432
1450.395
1460.921
1470.35
1480.0097
1490.19
150.211
1500.482
1510.546
1520.0432
1530.524
1540.821
1550.189
1560.766
1570.727
1580.892
1590.481
160.203
1600.366
1610.254
1620.87
1630.408
1640.06
1650.216
1660.555
1670.667
1680.911
1690.00329
170.145
180.287
190.131
20.798
200.792
210.163
220.168
230.272
240.0261
250.73
260.0747
270.181
280.628
290.293
30.0215
300.92
310.589
320.73
330.324
340.418
350.677
360.216
370.0687
380.18
390.673
40.89
400.128
410.597
420.483
430.0676
442.34117e-4
450.819
460.127
470.151
480.185
490.179
50.596
500.85
510.49
520.187
530.515
540.257
550.0682
560.701
570.431
580.205
590.0787
60.788
600.0819
610.277
620.143
630.322
640.261
650.0859
660.693
670.22
680.889
690.332
70.288
700.0474
710.0602
720.257
730.0175
740.486
750.0501
760.387
770.106
780.0226
790.109
80.0602
800.57
810.175
820.0923
830.966
840.378
850.0198
860.0403
870.0307
880.216
890.0646
90.349
900.0837
910.72
920.272
930.798
940.0835
950.135
960.153
970.917
980.124
990.752



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12000


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0000990 (conventional dendritic cell)
0000255 (eukaryotic cell)
0000451 (dendritic cell)
0000840 (immature conventional dendritic cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000044 (human monocyte immature derived dendritic cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)