Personal tools

Difference between revisions of "FF:11454-119A5"

From FANTOM5_SSTAR

Jump to: navigation, search
 
(23 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
{{f5samples
 
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000486,UBERON:0000914,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0002050,UBERON:0002067,UBERON:0002097,UBERON:0002199,UBERON:0002329,UBERON:0002384,UBERON:0002416,UBERON:0002532,UBERON:0003059,UBERON:0003077,UBERON:0003102,UBERON:0003104,UBERON:0004016,UBERON:0004120,UBERON:0004290,UBERON:0004923,UBERON:0005291,UBERON:0005423,UBERON:0009142
+
|DRA_sample_Accession=CAGE@SAMD00005417
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000057,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002371,CL:0002551,CL:0002620
+
|accession_numbers=CAGE;DRX008258;DRR009130;DRZ000555;DRZ001940;DRZ011905;DRZ013290
 +
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002097,UBERON:0002199,UBERON:0002384,UBERON:0000479,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0004923,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003102,UBERON:0010317,UBERON:0002067,UBERON:0002416
 +
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002620,CL:0002551
 
|ancestors_in_disease_facet=
 
|ancestors_in_disease_facet=
 +
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000057,FF:0000250,FF:0000001,FF:0000062
 
|comment=
 
|comment=
 
|created_by=
 
|created_by=
 
|creation_date=
 
|creation_date=
 +
|data_phase=2
 +
|datafreeze_phase=2
 
|def=
 
|def=
|
+
|expression_enrichment_score=
 
|fonse_cell_line=
 
|fonse_cell_line=
 
|fonse_cell_line_closure=
 
|fonse_cell_line_closure=
Line 35: Line 42:
 
|fonse_treatment_closure=
 
|fonse_treatment_closure=
 
|has_quality=
 
|has_quality=
 +
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Dermal%252c%2520donor5.CNhs12055.11454-119A5.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Dermal%252c%2520donor5.CNhs12055.11454-119A5.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Dermal%252c%2520donor5.CNhs12055.11454-119A5.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Dermal%252c%2520donor5.CNhs12055.11454-119A5.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Dermal%252c%2520donor5.CNhs12055.11454-119A5.hg38.nobarcode.ctss.bed.gz
 
|id=FF:11454-119A5
 
|id=FF:11454-119A5
|is_a=EFO:0002091;;FF:0000002;;FF:0000062;;FF:0000210
+
|is_a=EFO:0002091;;FF:0000062
 +
|is_obsolete=
 +
|library_id=CNhs12055
 +
|library_id_phase_based=2:CNhs12055
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11454
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11454
 
|name=Fibroblast - Dermal, donor5
 
|name=Fibroblast - Dermal, donor5
 
|namespace=FANTOM5
 
|namespace=FANTOM5
Line 42: Line 61:
 
|profile_cagescan=,,,
 
|profile_cagescan=,,,
 
|profile_hcage=CNhs12055,LSID838,release011,COMPLETED
 
|profile_hcage=CNhs12055,LSID838,release011,COMPLETED
|profile_rnaseq=,,,
+
|profile_rnaseq=
 
|profile_srnaseq=,,,
 
|profile_srnaseq=,,,
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 +
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,-0.212203493447947,0.147701427826032,0,0,0,0,0,0,0,0,0,0,0,0.0651586387455666,0,0.338647428462356,0,0.147369494509197,0,0,0,0.196781092750337,0,0,0.124569528610739,0,0,0,0,0,0,0,0,0,0,0.171907396292758,0,0.0561531765461276,0.0169365635065124,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.329013375992186,0,0,0,-0.0969923612426051,0,0,0.119479628522012,0,0,0,0,0,0,0,0,0.0651586387455666,0,0,0,0,0,0,0,0,0,0.0934816315200053,0,0,0,0,0,-0.0115518997947441,0.0325793193727833,0,0,-0.0139750729964334,-0.125243704549489,0,0.0651586387455666,0.0325793193727833,0,-0.0980353512377064,0.00251374643944275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149611625482931,0,0,0,-0.121778579634628,-0.496710178663459,0,0,0,0,0,0
 +
|repeat_enrich_byname=0,0,0,0.0651586387455666,-0.0980353512377064,0,0,0.121804624294444,0.0651586387455666,0.0651586387455666,0.0651586387455666,0,0,0.0651586387455666,0,0,-0.0752714789928062,0,0.10015809682024,-0.143515142523472,0.0325793193727833,0,0.43848423543337,0,0.121804624294444,0,0,0,0,0,0,0,0.482070188703986,0,0.0147460871562517,0,0,0,0,0,0.0553073469826253,0,-0.065846433281955,-0.0683442610773682,0,0,0,0,-0.044831669191009,0,-0.120879483793741,0.246293207668769,0.000819002339337738,-0.138762698696502,-0.055712496781182,0,0,0,0.0219783314196897,0.105549253706499,0,0,0.0427268362442193,-0.033980124051462,0,0,-0.26923995725719,0,0.0168828164308109,0.0206170071293141,0,0.00425292968132746,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,-0.0322496076605747,0,0,0,0,-0.314535753629957,0,0,0.912083054117386,0.202301420998622,0.0533628134697176,-0.28080845957596,0,-0.302389727009913,-0.0284284008512548,-0.436080892128462,-0.0139750729964334,0.0245055469216197,0.254157171859547,0,0.058794825239517,0.15672207802389,0.0081643422278151,-0.0115518997947441,0.00480896665724245,0.13364109306983,-0.272344736147863,0,0,0,-0.0621256612016569,0,0,-0.0214018837564862,-0.077907382191986,-0.0378145910834512,0.00512797583571165,-0.0498238112647991,0.234795494992422,0.364859764132939,-0.199910334506993,0,0.261134011858859,0.0507430052957036,0.171907396292758,-0.0187874068247333,-0.0648182076818255,-0.250859364158117,-0.00563611752212823,0,-0.362172837516536,-0.0683442610773682,0,0.195118869177079,0.135165397334753,0,0,-0.0868067920606281,0,0,0,0.0130530361251167,0,0.163317657109622,-0.4743335042846,-0.232855561555545,0,-0.053555502625084,0.0984809525271982,-0.10020007298371,0,-0.0644880680203413,0.121804624294444,0.000273093883374875,-0.271159181226472,0,0.0588679457804138,0.284670366436325,-0.116456986301001,-0.250487409098979,0.00671181193374139,-0.195419190826526,0.0345362526170321,0.119786454979083,0.07515837095004,0.0333543902473141,0.766250384418805,0,-0.0291675336242877,-0.679498131621524,-0.0658490469351802,0.0657281499221715,0.0651586387455666,0.0562585811640413,0,-0.0626340573542707,0.0403752806557257,-0.137049226299513,0.118645818933322,0.134954940991562,0.255906721362643,0,-0.0891481606798281,-0.788130937773974,0,0,0.006454293340645,0,0.210412494546393,0.261042135536938,-0.211650427864589,0.205907020257415,0,-0.0733511011965748,0,0.0651586387455666,-0.135812194031706,-0.170317399018822,0,-0.273212231938482,-0.314463925195002,-0.112245602384511,-0.0508124346893675,0,0,-0.428877082257615,0,0.491970438810784,-0.187837432588637,0.0581997791566426,-0.105737727797808,0.697611397456056,0,-0.0760434900814722,0,0,-0.177527765965176,0.0651586387455666,0.338533908416992,0,0,-0.0853746086027304,0.2441514648909,0,0,0.0651586387455666,0.0507195288476275,0,0,0,0,0,0,0,-0.153197800588217,0.113879500503839,0,0.113809671480897,0,0,0,0,0,0,0,0,-0.0483457114678147,-0.0206992265375176,0.048889980616338,0,0,0,0,0.113289973438712,0.0915024269236705,0.0651586387455666,-0.131862706497632,0,0,0,0,-0.0209823510436448,0,0,0,0.0325793193727833,-0.057730457053664,-0.150007936524447,0,0,0,-0.0601311458666811,0,0,0,0,0.075573981968806,0,0,-0.213839542156987,0,-0.118575265314808,-0.0164232408012748,0,0.219209384310686,-0.0839742311520033,-0.817649901837678,0,0,-0.261347131789888,0,0,0.191004645612238,-0.0172115842200997,0.0651586387455666,0,0,0,0,0,0,0,0.359929803172493,0.0390279141808781,0,0,0,0,0,0,0,0,0,0,-0.124515666085633,0.165302061731091,0,0,0,0,0,0,0,0.0084732962938802,-0.0791901994787419,0,0,0.0325793193727833,0,0,0.0651586387455666,0,0,0.352410249773253,0,0,0,0,0,-0.0969923612426051,0,0,0,0,0.078579599916956,0,0,-0.212203493447947,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,-0.439095200373453,0,0.121804624294444,0,0,0,0,0,-0.102925901913332,0,0.216823255735109,0,0,0.102938882026132,0,0,0,0.505393670867395,0,-0.160318030086386,0,0,0,0,0,0,0.0325793193727833,0,0,0,0,0,0,0,0,0,0,0,0.060902312147222,0,0,0.68450033419492,0,0.168787806707929,0.0487045317189728,0,0,0.157099950055851,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0.0325793193727833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.00227872443230509,0,0,0,0,0,0,0,0.196781092750337,0,0.189665371342023,-0.0920328098005262,0,0,0,0,0.182943248747315,0,0.0978090166185043,-0.013272772061229,0.0684897138021917,0,0,0,0.0641474450367074,0.329013375992186,0,0,0,0.351313243810492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338647428462356,0,0,0,0,0,0,0,0,0,0,0,0,0.0325793193727833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121804624294444,0.0268909488718056,0,0,0,0,0,0,0,0.0651586387455666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214720520749756,0,0,0,-0.147927590911477,0,0,0,0,0,0,0,0,0.171907396292758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0651586387455666,0,0,0,0.0651586387455666,0,0,0,-0.28362424265595,0,0,0,0,0,0,0,0,0.171907396292758,0,0,0,0,0.0169365635065124,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121804624294444,0.0420849321831391,0,0,0,0,0.124270285631839,0,0,0,0,0,0,0,0,0,0,0.0651586387455666,0,0,0,0,0,0,0,0.0325793193727833,0,0,0.00391551010109653,0,0,0.119384108297974,0,0,0,0,0,0,0,0,0,0,0,0,0.00383845959544019,0,0,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0,0,0,0,0,0,0,0.873606419714929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.139584390818672,-0.496710178663459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.085953698146379,0,-0.246312448239843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0312053897745464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0325793193727833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0229903023212358,0,0,0,0,0,0,0,0,0.121804624294444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299223250965862,0,0,0,0.147369494509197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0651586387455666,0,0,-0.096334102139285,0,0,0.0325793193727833,0,0,0,0,0.0492113992957574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237397835175619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.054237112097996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0797419986649781,0,0,0,0,0,0,0,0,0,0,0,0,0.0325793193727833,0,0,0,0,0,0.119479628522012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124569528610739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164506687996093,0,0,0,-0.0499379825215864,0.0325793193727833,0,0,0,0,0,0,0,0,0,0.0447036066185719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192742874390541,0,0,0.129619927815642,0,-0.0950771675937697,0.021600506642509,0,0,0,0,0,0.0424450622791855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0240038761436898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0225459769333642,0,0,-0.180251432786905,0,0,0.0046490890499656,0,0.0149937769676695,0.0651586387455666,0.0651586387455666,0,-0.174992895090299,-0.392975848502586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0651586387455666,0,0.00829969258296743,0.0913039422864635,0,-0.313677615604857,0,0.0651586387455666,-0.492943278669286,0,0.0325793193727833,0,-0.0959594073735869
 
|rna_box=119
 
|rna_box=119
 
|rna_catalog_number=SC2305
 
|rna_catalog_number=SC2305
Line 57: Line 79:
 
|rna_weight_ug=10
 
|rna_weight_ug=10
 
|sample_age=fetal
 
|sample_age=fetal
 +
|sample_category=primary cells
 
|sample_cell_catalog=N/A
 
|sample_cell_catalog=N/A
 
|sample_cell_line=
 
|sample_cell_line=
Line 69: Line 92:
 
|sample_ethnicity=unknown
 
|sample_ethnicity=unknown
 
|sample_experimental_condition=
 
|sample_experimental_condition=
 +
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.35407416312134e-280!GO:0043226;organelle;1.89004915872599e-231!GO:0043229;intracellular organelle;5.14884737662412e-231!GO:0043231;intracellular membrane-bound organelle;8.03815878165384e-226!GO:0043227;membrane-bound organelle;8.97323305994604e-226!GO:0005737;cytoplasm;2.65812438903088e-183!GO:0044422;organelle part;1.2988440854288e-170!GO:0044446;intracellular organelle part;6.72104046921088e-169!GO:0044444;cytoplasmic part;1.37338959477881e-126!GO:0032991;macromolecular complex;6.06555754489118e-118!GO:0044237;cellular metabolic process;2.08563120341486e-110!GO:0044238;primary metabolic process;3.23191442565974e-110!GO:0005634;nucleus;4.72892924801351e-109!GO:0030529;ribonucleoprotein complex;1.09624739124492e-104!GO:0043170;macromolecule metabolic process;1.42451436794119e-102!GO:0044428;nuclear part;4.04381141217529e-91!GO:0043233;organelle lumen;2.02785239615913e-87!GO:0031974;membrane-enclosed lumen;2.02785239615913e-87!GO:0003723;RNA binding;3.97832009525168e-82!GO:0005739;mitochondrion;3.59681221915189e-74!GO:0005515;protein binding;7.20205194679376e-72!GO:0043283;biopolymer metabolic process;2.01162609286463e-62!GO:0005840;ribosome;2.01162609286463e-62!GO:0006396;RNA processing;1.62543715646856e-60!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.84657759091331e-60!GO:0043234;protein complex;2.55995625226252e-58!GO:0006412;translation;3.11112325833816e-57!GO:0010467;gene expression;1.76349742116009e-56!GO:0003735;structural constituent of ribosome;8.14111612500156e-55!GO:0016043;cellular component organization and biogenesis;3.08366007643126e-54!GO:0031981;nuclear lumen;3.20086663451752e-53!GO:0044429;mitochondrial part;7.99701442212462e-51!GO:0019538;protein metabolic process;1.24988690869823e-50!GO:0031090;organelle membrane;1.84928025469311e-49!GO:0043228;non-membrane-bound organelle;4.50094367318587e-48!GO:0043232;intracellular non-membrane-bound organelle;4.50094367318587e-48!GO:0009058;biosynthetic process;3.52996622501108e-47!GO:0031967;organelle envelope;6.8369860861824e-47!GO:0033279;ribosomal subunit;9.9898255514805e-47!GO:0031975;envelope;1.86233938743091e-46!GO:0044249;cellular biosynthetic process;3.29589547941229e-45!GO:0044260;cellular macromolecule metabolic process;4.89472605583588e-45!GO:0016071;mRNA metabolic process;5.8198558592846e-45!GO:0044267;cellular protein metabolic process;1.05648050190594e-44!GO:0006259;DNA metabolic process;3.40993006357203e-43!GO:0006996;organelle organization and biogenesis;1.06878192995863e-42!GO:0009059;macromolecule biosynthetic process;3.28478741831591e-42!GO:0008380;RNA splicing;1.11344094964339e-41!GO:0015031;protein transport;3.22357244486717e-41!GO:0033036;macromolecule localization;7.29263980219987e-41!GO:0005829;cytosol;3.58835782067856e-40!GO:0003676;nucleic acid binding;7.76321466584506e-39!GO:0006397;mRNA processing;9.3257405762461e-39!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.69715732582346e-38!GO:0065003;macromolecular complex assembly;1.97015674384105e-37!GO:0045184;establishment of protein localization;3.72719243333985e-37!GO:0008104;protein localization;5.25286786475512e-37!GO:0046907;intracellular transport;6.54955434367018e-36!GO:0007049;cell cycle;2.65231600190781e-34!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.07874572147938e-33!GO:0022607;cellular component assembly;2.08449876832763e-33!GO:0005654;nucleoplasm;4.01855977124717e-32!GO:0005740;mitochondrial envelope;2.78411057821525e-31!GO:0006886;intracellular protein transport;1.35326906203897e-29!GO:0005681;spliceosome;2.09475968541892e-29!GO:0031966;mitochondrial membrane;3.16993134703673e-29!GO:0019866;organelle inner membrane;1.44191857240046e-28!GO:0000166;nucleotide binding;1.48254600483394e-28!GO:0022402;cell cycle process;4.03473162351486e-27!GO:0016070;RNA metabolic process;6.98572884332305e-27!GO:0000278;mitotic cell cycle;1.28578703325385e-26!GO:0005743;mitochondrial inner membrane;2.34147084949761e-26!GO:0006974;response to DNA damage stimulus;3.68726971830259e-26!GO:0044451;nucleoplasm part;9.12243977331454e-26!GO:0044445;cytosolic part;1.1055809041535e-25!GO:0005694;chromosome;1.25449900390317e-25!GO:0015934;large ribosomal subunit;5.10433847926717e-24!GO:0031980;mitochondrial lumen;7.34562259405975e-24!GO:0005759;mitochondrial matrix;7.34562259405975e-24!GO:0015935;small ribosomal subunit;7.38927423700312e-24!GO:0044427;chromosomal part;4.01648094969703e-23!GO:0016462;pyrophosphatase activity;1.01778911066125e-22!GO:0006119;oxidative phosphorylation;1.39858072622381e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.39858072622381e-22!GO:0051649;establishment of cellular localization;1.43041088152987e-22!GO:0022403;cell cycle phase;1.73831662851221e-22!GO:0051641;cellular localization;1.81761342784581e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;2.25301638953946e-22!GO:0006281;DNA repair;3.91767696059711e-22!GO:0017111;nucleoside-triphosphatase activity;3.99874359424109e-22!GO:0005730;nucleolus;6.00933848097525e-22!GO:0000087;M phase of mitotic cell cycle;8.1536303177592e-22!GO:0007067;mitosis;2.30918897761363e-21!GO:0044455;mitochondrial membrane part;2.47250506014488e-21!GO:0012505;endomembrane system;8.50702707034764e-21!GO:0006457;protein folding;9.12651588056918e-21!GO:0022618;protein-RNA complex assembly;4.18427723440522e-20!GO:0051301;cell division;5.42622272637222e-20!GO:0016874;ligase activity;7.1904675071623e-20!GO:0017076;purine nucleotide binding;1.4043238827408e-19!GO:0032553;ribonucleotide binding;1.4043238827408e-19!GO:0032555;purine ribonucleotide binding;1.4043238827408e-19!GO:0000279;M phase;2.86644395469095e-19!GO:0051276;chromosome organization and biogenesis;2.99961855652257e-19!GO:0009719;response to endogenous stimulus;6.75777091512537e-19!GO:0042254;ribosome biogenesis and assembly;9.59236293734859e-19!GO:0006260;DNA replication;4.07305806533146e-18!GO:0005761;mitochondrial ribosome;9.08667536253669e-18!GO:0000313;organellar ribosome;9.08667536253669e-18!GO:0005746;mitochondrial respiratory chain;1.0433515077272e-17!GO:0005524;ATP binding;1.0433515077272e-17!GO:0006512;ubiquitin cycle;1.36824162188882e-17!GO:0048770;pigment granule;1.58445964032371e-17!GO:0042470;melanosome;1.58445964032371e-17!GO:0008135;translation factor activity, nucleic acid binding;1.86189811110181e-17!GO:0032559;adenyl ribonucleotide binding;2.57853348426008e-17!GO:0030554;adenyl nucleotide binding;4.08711198389417e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.62957879573144e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.09140755609177e-17!GO:0044265;cellular macromolecule catabolic process;7.33137062921497e-17!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.85590057857937e-16!GO:0005635;nuclear envelope;2.38918699493744e-16!GO:0051186;cofactor metabolic process;2.51785818624738e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;3.81593688270026e-16!GO:0043285;biopolymer catabolic process;4.0218073073237e-16!GO:0006511;ubiquitin-dependent protein catabolic process;4.95811015161853e-16!GO:0050136;NADH dehydrogenase (quinone) activity;5.0572549134163e-16!GO:0003954;NADH dehydrogenase activity;5.0572549134163e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.0572549134163e-16!GO:0019941;modification-dependent protein catabolic process;5.59781722401209e-16!GO:0043632;modification-dependent macromolecule catabolic process;5.59781722401209e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;8.47547365702202e-16!GO:0000375;RNA splicing, via transesterification reactions;8.47547365702202e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.47547365702202e-16!GO:0044257;cellular protein catabolic process;1.03377422123881e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.45836079611907e-15!GO:0031965;nuclear membrane;2.44200257727641e-15!GO:0005783;endoplasmic reticulum;2.49167822362169e-15!GO:0044453;nuclear membrane part;4.30251791458841e-15!GO:0009057;macromolecule catabolic process;4.68914062656277e-15!GO:0006605;protein targeting;5.70346664065515e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;1.03646216195491e-14!GO:0044432;endoplasmic reticulum part;2.31284553782618e-14!GO:0042775;organelle ATP synthesis coupled electron transport;2.46190407261866e-14!GO:0042773;ATP synthesis coupled electron transport;2.46190407261866e-14!GO:0030964;NADH dehydrogenase complex (quinone);2.92218755014656e-14!GO:0045271;respiratory chain complex I;2.92218755014656e-14!GO:0005747;mitochondrial respiratory chain complex I;2.92218755014656e-14!GO:0051082;unfolded protein binding;3.73613262193837e-14!GO:0006323;DNA packaging;4.31332092956208e-14!GO:0008134;transcription factor binding;4.32887371938115e-14!GO:0030163;protein catabolic process;6.3379734174757e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.9720959815454e-14!GO:0003743;translation initiation factor activity;8.43593796325595e-14!GO:0006399;tRNA metabolic process;8.68468526635184e-14!GO:0048193;Golgi vesicle transport;1.37992479771142e-13!GO:0044248;cellular catabolic process;1.41567142817933e-13!GO:0043412;biopolymer modification;2.96436528631282e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.99173496326223e-13!GO:0016887;ATPase activity;6.90085298864923e-13!GO:0042623;ATPase activity, coupled;7.90116412017648e-13!GO:0006413;translational initiation;9.13284861239631e-13!GO:0006732;coenzyme metabolic process;1.24367647735074e-12!GO:0005794;Golgi apparatus;1.41026374489288e-12!GO:0016604;nuclear body;1.44179370566643e-12!GO:0005643;nuclear pore;1.50958380755982e-12!GO:0006364;rRNA processing;1.61775809671627e-12!GO:0000074;regulation of progression through cell cycle;2.8707522644932e-12!GO:0051726;regulation of cell cycle;3.02800999714176e-12!GO:0065004;protein-DNA complex assembly;4.19383570603573e-12!GO:0000785;chromatin;5.68293993706681e-12!GO:0016072;rRNA metabolic process;6.09694417267081e-12!GO:0004386;helicase activity;8.5686037150818e-12!GO:0005793;ER-Golgi intermediate compartment;1.02029232845226e-11!GO:0006464;protein modification process;1.69568059294638e-11!GO:0009055;electron carrier activity;1.76089015438941e-11!GO:0006333;chromatin assembly or disassembly;2.17776893857924e-11!GO:0006913;nucleocytoplasmic transport;2.28259048170164e-11!GO:0065002;intracellular protein transport across a membrane;2.38209929644614e-11!GO:0009259;ribonucleotide metabolic process;4.32788391013606e-11!GO:0015630;microtubule cytoskeleton;4.32943596311719e-11!GO:0050657;nucleic acid transport;5.2721975698349e-11!GO:0051236;establishment of RNA localization;5.2721975698349e-11!GO:0050658;RNA transport;5.2721975698349e-11!GO:0051169;nuclear transport;5.91836705459217e-11!GO:0006403;RNA localization;6.06403857741915e-11!GO:0006446;regulation of translational initiation;6.48836549795073e-11!GO:0046930;pore complex;8.82440288300608e-11!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.0681031908324e-10!GO:0004812;aminoacyl-tRNA ligase activity;1.0681031908324e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.0681031908324e-10!GO:0006163;purine nucleotide metabolic process;1.21355647512607e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.74323583692975e-10!GO:0008026;ATP-dependent helicase activity;2.10500467897354e-10!GO:0043038;amino acid activation;3.02925097498706e-10!GO:0006418;tRNA aminoacylation for protein translation;3.02925097498706e-10!GO:0043039;tRNA aminoacylation;3.02925097498706e-10!GO:0043687;post-translational protein modification;4.52878714391662e-10!GO:0006461;protein complex assembly;4.96868639679435e-10!GO:0005789;endoplasmic reticulum membrane;5.60325965654907e-10!GO:0000775;chromosome, pericentric region;5.7538315523587e-10!GO:0009150;purine ribonucleotide metabolic process;5.77806994817268e-10!GO:0016607;nuclear speck;7.68855714855883e-10!GO:0016192;vesicle-mediated transport;8.27290189755808e-10!GO:0006334;nucleosome assembly;8.85150457182279e-10!GO:0009260;ribonucleotide biosynthetic process;9.4446911296784e-10!GO:0006164;purine nucleotide biosynthetic process;1.01836611492295e-09!GO:0008565;protein transporter activity;1.23863378744023e-09!GO:0008639;small protein conjugating enzyme activity;1.3920558657422e-09!GO:0030532;small nuclear ribonucleoprotein complex;1.44497375077166e-09!GO:0005819;spindle;1.73152347094305e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.75948035272178e-09!GO:0050794;regulation of cellular process;1.76068444308118e-09!GO:0003697;single-stranded DNA binding;1.87344655538731e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.39647898731056e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.21603755267201e-09!GO:0009060;aerobic respiration;3.26429611533786e-09!GO:0004842;ubiquitin-protein ligase activity;3.33995308133601e-09!GO:0051028;mRNA transport;3.46246842734685e-09!GO:0031497;chromatin assembly;3.80151037946743e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.84179819747756e-09!GO:0003712;transcription cofactor activity;5.27631900548634e-09!GO:0016779;nucleotidyltransferase activity;5.3909664984817e-09!GO:0043566;structure-specific DNA binding;5.50321790025202e-09!GO:0006261;DNA-dependent DNA replication;5.50321790025202e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.74001735840817e-09!GO:0009199;ribonucleoside triphosphate metabolic process;6.80285773956539e-09!GO:0009141;nucleoside triphosphate metabolic process;8.44885329297002e-09!GO:0045333;cellular respiration;8.4738077878533e-09!GO:0019787;small conjugating protein ligase activity;9.32130387607259e-09!GO:0006888;ER to Golgi vesicle-mediated transport;1.16358703741863e-08!GO:0005813;centrosome;1.23067746938465e-08!GO:0017038;protein import;1.32734406946636e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.52165833762355e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.6206847185986e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.6206847185986e-08!GO:0016740;transferase activity;1.96381892149115e-08!GO:0051188;cofactor biosynthetic process;2.4711946261428e-08!GO:0006366;transcription from RNA polymerase II promoter;2.96545357856939e-08!GO:0016881;acid-amino acid ligase activity;4.22555526274218e-08!GO:0005815;microtubule organizing center;4.31397783480947e-08!GO:0006099;tricarboxylic acid cycle;4.58678062303348e-08!GO:0046356;acetyl-CoA catabolic process;4.58678062303348e-08!GO:0007005;mitochondrion organization and biogenesis;6.03125772255283e-08!GO:0009117;nucleotide metabolic process;7.38966579162844e-08!GO:0005667;transcription factor complex;7.39204855577462e-08!GO:0012501;programmed cell death;9.77128215836142e-08!GO:0015986;ATP synthesis coupled proton transport;9.94655694866008e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.94655694866008e-08!GO:0009142;nucleoside triphosphate biosynthetic process;9.9869766063421e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.9869766063421e-08!GO:0030120;vesicle coat;1.01816316569629e-07!GO:0030662;coated vesicle membrane;1.01816316569629e-07!GO:0046034;ATP metabolic process;1.15886666939002e-07!GO:0003899;DNA-directed RNA polymerase activity;1.15906479491167e-07!GO:0006084;acetyl-CoA metabolic process;1.18096097652988e-07!GO:0051329;interphase of mitotic cell cycle;1.29140382226033e-07!GO:0009109;coenzyme catabolic process;1.29140382226033e-07!GO:0009056;catabolic process;1.33887941167804e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.34049454713921e-07!GO:0016568;chromatin modification;1.37447917746733e-07!GO:0006915;apoptosis;1.60463489381579e-07!GO:0051187;cofactor catabolic process;2.03198246717012e-07!GO:0019829;cation-transporting ATPase activity;2.17331168309349e-07!GO:0005657;replication fork;2.24502981871796e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.38018008260741e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.38018008260741e-07!GO:0007051;spindle organization and biogenesis;2.94350991252033e-07!GO:0048475;coated membrane;3.09348759093934e-07!GO:0030117;membrane coat;3.09348759093934e-07!GO:0051325;interphase;3.54727233890531e-07!GO:0008094;DNA-dependent ATPase activity;3.90878284414228e-07!GO:0000245;spliceosome assembly;4.31380183460202e-07!GO:0019222;regulation of metabolic process;4.52889117249343e-07!GO:0015078;hydrogen ion transmembrane transporter activity;7.14706347271119e-07!GO:0032446;protein modification by small protein conjugation;7.72992446243832e-07!GO:0048523;negative regulation of cellular process;8.21864714660278e-07!GO:0016469;proton-transporting two-sector ATPase complex;9.22795005483116e-07!GO:0005762;mitochondrial large ribosomal subunit;9.36964551494744e-07!GO:0000315;organellar large ribosomal subunit;9.36964551494744e-07!GO:0003924;GTPase activity;9.6782653823222e-07!GO:0051246;regulation of protein metabolic process;1.05165905496161e-06!GO:0000075;cell cycle checkpoint;1.10522197498046e-06!GO:0008219;cell death;1.2145774998467e-06!GO:0016265;death;1.2145774998467e-06!GO:0016567;protein ubiquitination;1.29140647519787e-06!GO:0009108;coenzyme biosynthetic process;1.46901516494303e-06!GO:0005788;endoplasmic reticulum lumen;1.49282468242155e-06!GO:0006754;ATP biosynthetic process;1.59205925721896e-06!GO:0006753;nucleoside phosphate metabolic process;1.59205925721896e-06!GO:0045259;proton-transporting ATP synthase complex;1.70570653246525e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.36937727431794e-06!GO:0043623;cellular protein complex assembly;2.50503373965994e-06!GO:0016491;oxidoreductase activity;2.64151772437087e-06!GO:0000151;ubiquitin ligase complex;2.76151803906615e-06!GO:0044431;Golgi apparatus part;3.10112972912117e-06!GO:0006752;group transfer coenzyme metabolic process;3.55865417116529e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;5.02557950036222e-06!GO:0051170;nuclear import;5.47172451431236e-06!GO:0050789;regulation of biological process;5.59701625002555e-06!GO:0005768;endosome;5.92295765411552e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;6.31840228599109e-06!GO:0019843;rRNA binding;6.62587208435631e-06!GO:0016853;isomerase activity;7.74577355406199e-06!GO:0016859;cis-trans isomerase activity;8.12706684244061e-06!GO:0005839;proteasome core complex (sensu Eukaryota);8.14106214760729e-06!GO:0000314;organellar small ribosomal subunit;8.73144749532752e-06!GO:0005763;mitochondrial small ribosomal subunit;8.73144749532752e-06!GO:0006613;cotranslational protein targeting to membrane;9.19242431106545e-06!GO:0006793;phosphorus metabolic process;9.52937285681589e-06!GO:0006796;phosphate metabolic process;9.52937285681589e-06!GO:0006091;generation of precursor metabolites and energy;9.52937285681589e-06!GO:0008654;phospholipid biosynthetic process;9.66935933651553e-06!GO:0007010;cytoskeleton organization and biogenesis;1.03423335451178e-05!GO:0006606;protein import into nucleus;1.14373607065614e-05!GO:0016126;sterol biosynthetic process;1.4947506439287e-05!GO:0000786;nucleosome;1.58711459626636e-05!GO:0051427;hormone receptor binding;1.59267558560969e-05!GO:0003724;RNA helicase activity;1.68220234232757e-05!GO:0005798;Golgi-associated vesicle;1.68355795544792e-05!GO:0006302;double-strand break repair;1.94986854321012e-05!GO:0048519;negative regulation of biological process;2.16022484976874e-05!GO:0016787;hydrolase activity;2.26550441137035e-05!GO:0007059;chromosome segregation;2.5151194835771e-05!GO:0000776;kinetochore;2.65160637311104e-05!GO:0003684;damaged DNA binding;2.7770583889765e-05!GO:0031252;leading edge;3.25253743606395e-05!GO:0016563;transcription activator activity;3.31327200641569e-05!GO:0045454;cell redox homeostasis;3.31327200641569e-05!GO:0044440;endosomal part;3.5764568449709e-05!GO:0010008;endosome membrane;3.5764568449709e-05!GO:0035257;nuclear hormone receptor binding;3.5764568449709e-05!GO:0015980;energy derivation by oxidation of organic compounds;3.72705923077157e-05!GO:0008033;tRNA processing;3.77339328281177e-05!GO:0031324;negative regulation of cellular metabolic process;3.77339328281177e-05!GO:0006310;DNA recombination;3.83203352425952e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.88620761403465e-05!GO:0043021;ribonucleoprotein binding;3.91178260385e-05!GO:0004298;threonine endopeptidase activity;4.23595667472576e-05!GO:0045786;negative regulation of progression through cell cycle;4.2594950768323e-05!GO:0044452;nucleolar part;5.26803781397388e-05!GO:0006916;anti-apoptosis;5.2821162862622e-05!GO:0016741;transferase activity, transferring one-carbon groups;5.3542546701551e-05!GO:0008168;methyltransferase activity;5.51830656530953e-05!GO:0016363;nuclear matrix;5.56582847879756e-05!GO:0005525;GTP binding;5.56582847879756e-05!GO:0000139;Golgi membrane;5.57542293444766e-05!GO:0031323;regulation of cellular metabolic process;6.0796029195444e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;6.51033990966194e-05!GO:0003713;transcription coactivator activity;6.87886566078395e-05!GO:0030867;rough endoplasmic reticulum membrane;7.05259245377022e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.66322301042174e-05!GO:0051168;nuclear export;8.13612373061249e-05!GO:0016310;phosphorylation;8.14095381381912e-05!GO:0006383;transcription from RNA polymerase III promoter;8.38509911290584e-05!GO:0031968;organelle outer membrane;9.20638531976618e-05!GO:0005769;early endosome;9.28018465449086e-05!GO:0051052;regulation of DNA metabolic process;0.000103039415933549!GO:0009165;nucleotide biosynthetic process;0.00010312613856726!GO:0016564;transcription repressor activity;0.000107663321647393!GO:0019867;outer membrane;0.000109082158688463!GO:0006350;transcription;0.000135421737803838!GO:0006626;protein targeting to mitochondrion;0.000136537087812334!GO:0000059;protein import into nucleus, docking;0.000159767124018087!GO:0043681;protein import into mitochondrion;0.000177140869472385!GO:0043069;negative regulation of programmed cell death;0.000188198178522287!GO:0003682;chromatin binding;0.000194971329038413!GO:0031988;membrane-bound vesicle;0.000197515298819305!GO:0003714;transcription corepressor activity;0.000198895516030745!GO:0004527;exonuclease activity;0.000200829363498295!GO:0003690;double-stranded DNA binding;0.000209304355251745!GO:0005048;signal sequence binding;0.000211004791016129!GO:0005874;microtubule;0.000220953813323271!GO:0019899;enzyme binding;0.000225929928859684!GO:0043066;negative regulation of apoptosis;0.000230848080103938!GO:0030880;RNA polymerase complex;0.000235141803811136!GO:0005791;rough endoplasmic reticulum;0.000251410771150839!GO:0042981;regulation of apoptosis;0.000253535210435981!GO:0006695;cholesterol biosynthetic process;0.000261836070694249!GO:0009892;negative regulation of metabolic process;0.000262042831630653!GO:0003678;DNA helicase activity;0.000264319493623694!GO:0016023;cytoplasmic membrane-bound vesicle;0.000269136451105596!GO:0007093;mitotic cell cycle checkpoint;0.000278283703393771!GO:0005905;coated pit;0.000278477104631706!GO:0046474;glycerophospholipid biosynthetic process;0.000285505276337407!GO:0007088;regulation of mitosis;0.00029445686768002!GO:0043067;regulation of programmed cell death;0.000294983311160091!GO:0051789;response to protein stimulus;0.000303168184240268!GO:0006986;response to unfolded protein;0.000303168184240268!GO:0007052;mitotic spindle organization and biogenesis;0.000356953488771569!GO:0004576;oligosaccharyl transferase activity;0.000377797460167211!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000382549534702718!GO:0032561;guanyl ribonucleotide binding;0.000384890962891174!GO:0019001;guanyl nucleotide binding;0.000384890962891174!GO:0006612;protein targeting to membrane;0.00039215525806381!GO:0003729;mRNA binding;0.000397557900676244!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000414358376775196!GO:0008250;oligosaccharyl transferase complex;0.000417725743005508!GO:0051252;regulation of RNA metabolic process;0.000430622174261756!GO:0031982;vesicle;0.00043089066201494!GO:0005741;mitochondrial outer membrane;0.000434256234225995!GO:0007006;mitochondrial membrane organization and biogenesis;0.000434256234225995!GO:0030036;actin cytoskeleton organization and biogenesis;0.000438489253027021!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000443527797171429!GO:0005885;Arp2/3 protein complex;0.000463609618988605!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0004738268904509!GO:0006839;mitochondrial transport;0.000473930714445654!GO:0030133;transport vesicle;0.000475624555220332!GO:0005770;late endosome;0.000505811663777467!GO:0033116;ER-Golgi intermediate compartment membrane;0.000509347250884132!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000556965122446467!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000559490919487875!GO:0000428;DNA-directed RNA polymerase complex;0.000559490919487875!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000567802868259944!GO:0031410;cytoplasmic vesicle;0.000656955702852004!GO:0030663;COPI coated vesicle membrane;0.000675668560179801!GO:0030126;COPI vesicle coat;0.000675668560179801!GO:0006414;translational elongation;0.00068097344997677!GO:0015631;tubulin binding;0.000689155643049583!GO:0016481;negative regulation of transcription;0.000691927528823074!GO:0005684;U2-dependent spliceosome;0.000710447272819403!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000715066719503497!GO:0008186;RNA-dependent ATPase activity;0.000746590497888464!GO:0006402;mRNA catabolic process;0.000815904585365572!GO:0008610;lipid biosynthetic process;0.000886098416935213!GO:0010468;regulation of gene expression;0.000889304058764278!GO:0035258;steroid hormone receptor binding;0.000937560796090645!GO:0007017;microtubule-based process;0.000946149799012978!GO:0031072;heat shock protein binding;0.00095300664897829!GO:0000922;spindle pole;0.00095300664897829!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000970263830275889!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000977634218009519!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000977634218009519!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000977634218009519!GO:0051920;peroxiredoxin activity;0.000983913184123368!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000994499454537282!GO:0000049;tRNA binding;0.00100843752323115!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00101171699300301!GO:0042802;identical protein binding;0.00117547967891001!GO:0005876;spindle microtubule;0.00119699745734864!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00120187765424649!GO:0051540;metal cluster binding;0.00120955316248407!GO:0051536;iron-sulfur cluster binding;0.00120955316248407!GO:0018196;peptidyl-asparagine modification;0.00126105112605832!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00126105112605832!GO:0046467;membrane lipid biosynthetic process;0.00127457005850306!GO:0030137;COPI-coated vesicle;0.00145630452194036!GO:0048500;signal recognition particle;0.00148594073120727!GO:0032508;DNA duplex unwinding;0.00149000787589275!GO:0032392;DNA geometric change;0.00149000787589275!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00152146431607025!GO:0006352;transcription initiation;0.00159797161481629!GO:0000082;G1/S transition of mitotic cell cycle;0.00161329270098552!GO:0006289;nucleotide-excision repair;0.00161740631273082!GO:0000228;nuclear chromosome;0.00164210670592847!GO:0043596;nuclear replication fork;0.00168565189390425!GO:0030029;actin filament-based process;0.00174604747756508!GO:0004004;ATP-dependent RNA helicase activity;0.00202219608538321!GO:0004518;nuclease activity;0.00203190444481992!GO:0000910;cytokinesis;0.0020706779809552!GO:0008312;7S RNA binding;0.0021011008027502!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00210574223950245!GO:0006401;RNA catabolic process;0.0021629137245264!GO:0008139;nuclear localization sequence binding;0.00221529296351745!GO:0006275;regulation of DNA replication;0.00234108071084485!GO:0030658;transport vesicle membrane;0.00234141892626185!GO:0009112;nucleobase metabolic process;0.0024036454014181!GO:0006268;DNA unwinding during replication;0.00253025886846616!GO:0051287;NAD binding;0.0025834857357094!GO:0043284;biopolymer biosynthetic process;0.00258979798912384!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00269699780033056!GO:0051087;chaperone binding;0.00275135747051165!GO:0003677;DNA binding;0.0029133607044196!GO:0031570;DNA integrity checkpoint;0.00307114049290738!GO:0008180;signalosome;0.00308369371838559!GO:0009116;nucleoside metabolic process;0.00310408923364965!GO:0031124;mRNA 3'-end processing;0.00312470476227872!GO:0005637;nuclear inner membrane;0.00315733956719819!GO:0030132;clathrin coat of coated pit;0.00319154722362126!GO:0031901;early endosome membrane;0.00320553713466305!GO:0043488;regulation of mRNA stability;0.00322585598645211!GO:0043487;regulation of RNA stability;0.00322585598645211!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00343748346079177!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00343748346079177!GO:0030521;androgen receptor signaling pathway;0.0035537105349997!GO:0006891;intra-Golgi vesicle-mediated transport;0.00371742446657005!GO:0030134;ER to Golgi transport vesicle;0.0037363400166454!GO:0004674;protein serine/threonine kinase activity;0.00374407767844583!GO:0046489;phosphoinositide biosynthetic process;0.00374669061074828!GO:0006595;polyamine metabolic process;0.00375595563620931!GO:0008652;amino acid biosynthetic process;0.00380752074258072!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00382484555770924!GO:0045047;protein targeting to ER;0.00382484555770924!GO:0051539;4 iron, 4 sulfur cluster binding;0.00388491739127254!GO:0016272;prefoldin complex;0.00394909677600401!GO:0050662;coenzyme binding;0.00406579327149024!GO:0006520;amino acid metabolic process;0.00407467126033842!GO:0006284;base-excision repair;0.00407467126033842!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00409286068966931!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00413046524125138!GO:0019752;carboxylic acid metabolic process;0.00415939304394084!GO:0006405;RNA export from nucleus;0.00437511326184063!GO:0006082;organic acid metabolic process;0.00439256731808079!GO:0006220;pyrimidine nucleotide metabolic process;0.0044362826939701!GO:0046483;heterocycle metabolic process;0.00466698579647561!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00467200173383522!GO:0032774;RNA biosynthetic process;0.00483960438369533!GO:0030127;COPII vesicle coat;0.00487177125681987!GO:0012507;ER to Golgi transport vesicle membrane;0.00487177125681987!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00495451336145657!GO:0006611;protein export from nucleus;0.00497375918498002!GO:0003711;transcription elongation regulator activity;0.005014353061442!GO:0017166;vinculin binding;0.00519476503071322!GO:0048471;perinuclear region of cytoplasm;0.00528174872992038!GO:0008092;cytoskeletal protein binding;0.00539505637075085!GO:0008361;regulation of cell size;0.00540845505194691!GO:0001726;ruffle;0.00545589378472371!GO:0006144;purine base metabolic process;0.00552302018387508!GO:0030118;clathrin coat;0.0057920314995453!GO:0032984;macromolecular complex disassembly;0.00595391463992872!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.005997716986616!GO:0042770;DNA damage response, signal transduction;0.005997716986616!GO:0030041;actin filament polymerization;0.00616152839768859!GO:0006351;transcription, DNA-dependent;0.0061808720237227!GO:0004003;ATP-dependent DNA helicase activity;0.0062137763324741!GO:0016049;cell growth;0.00653313565277299!GO:0000792;heterochromatin;0.00661258933169258!GO:0043601;nuclear replisome;0.00662033658023606!GO:0030894;replisome;0.00662033658023606!GO:0030660;Golgi-associated vesicle membrane;0.00662033658023606!GO:0000178;exosome (RNase complex);0.00668645392232806!GO:0003746;translation elongation factor activity;0.00670055769304007!GO:0065007;biological regulation;0.00674351310482646!GO:0007346;regulation of progression through mitotic cell cycle;0.0068087627876889!GO:0000725;recombinational repair;0.00728001342811583!GO:0000724;double-strand break repair via homologous recombination;0.00728001342811583!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00730787632575734!GO:0005096;GTPase activator activity;0.0073803932167962!GO:0009303;rRNA transcription;0.00770361760538683!GO:0016251;general RNA polymerase II transcription factor activity;0.00794415610209233!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00813516145576565!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00836965415855017!GO:0005832;chaperonin-containing T-complex;0.00838033261238833!GO:0005100;Rho GTPase activator activity;0.00838033261238833!GO:0005758;mitochondrial intermembrane space;0.00841643243572194!GO:0007050;cell cycle arrest;0.00841643243572194!GO:0043022;ribosome binding;0.00848245571450724!GO:0043624;cellular protein complex disassembly;0.00873872005693743!GO:0048487;beta-tubulin binding;0.00875249614607337!GO:0000339;RNA cap binding;0.00894845465910763!GO:0000096;sulfur amino acid metabolic process;0.00942279220556315!GO:0043241;protein complex disassembly;0.00946719048325722!GO:0030027;lamellipodium;0.00955640240907002!GO:0008047;enzyme activator activity;0.00968037293983247!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00988413248187299!GO:0019206;nucleoside kinase activity;0.0100380685807909!GO:0006270;DNA replication initiation;0.0102669617521392!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0103245666707258!GO:0016044;membrane organization and biogenesis;0.0105160432847898!GO:0032200;telomere organization and biogenesis;0.0106949338937618!GO:0000723;telomere maintenance;0.0106949338937618!GO:0000070;mitotic sister chromatid segregation;0.0109315213861824!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0109331479930921!GO:0015399;primary active transmembrane transporter activity;0.0109331479930921!GO:0000077;DNA damage checkpoint;0.0109847469851739!GO:0031970;organelle envelope lumen;0.0109978961637162!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0110200467972176!GO:0015002;heme-copper terminal oxidase activity;0.0110200467972176!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0110200467972176!GO:0004129;cytochrome-c oxidase activity;0.0110200467972176!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0111387631958311!GO:0000819;sister chromatid segregation;0.0111963082218351!GO:0016408;C-acyltransferase activity;0.0112331409839635!GO:0008408;3'-5' exonuclease activity;0.011367341560507!GO:0008022;protein C-terminus binding;0.0114853592665263!GO:0030176;integral to endoplasmic reticulum membrane;0.0115056388686148!GO:0065009;regulation of a molecular function;0.0116016944713763!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0122778243796309!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0122779814268721!GO:0015992;proton transport;0.0122910148773199!GO:0000287;magnesium ion binding;0.0125088669006879!GO:0004532;exoribonuclease activity;0.0125310272827171!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0125310272827171!GO:0006740;NADPH regeneration;0.012546800807464!GO:0006098;pentose-phosphate shunt;0.012546800807464!GO:0031123;RNA 3'-end processing;0.012620720835976!GO:0006950;response to stress;0.012620720835976!GO:0006818;hydrogen transport;0.0127048954148435!GO:0050681;androgen receptor binding;0.0127286048466433!GO:0048037;cofactor binding;0.0129090730919306!GO:0045941;positive regulation of transcription;0.0130909208546622!GO:0009451;RNA modification;0.013358085771454!GO:0044454;nuclear chromosome part;0.0135837573152696!GO:0045449;regulation of transcription;0.0138886712472091!GO:0007021;tubulin folding;0.0139180201307752!GO:0016407;acetyltransferase activity;0.0139180201307752!GO:0005869;dynactin complex;0.0143882976052562!GO:0006378;mRNA polyadenylation;0.0149223751855878!GO:0006541;glutamine metabolic process;0.0152532604077019!GO:0044262;cellular carbohydrate metabolic process;0.0154173189856886!GO:0000209;protein polyubiquitination;0.0155035836044231!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0156348958373336!GO:0006007;glucose catabolic process;0.0158021037465185!GO:0030145;manganese ion binding;0.0158702205650569!GO:0048522;positive regulation of cellular process;0.0160324785690848!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0162935690052574!GO:0016584;nucleosome positioning;0.0166560747953852!GO:0031625;ubiquitin protein ligase binding;0.0170742942702749!GO:0005862;muscle thin filament tropomyosin;0.0172948239834382!GO:0006650;glycerophospholipid metabolic process;0.0172948239834382!GO:0030496;midbody;0.0172948239834382!GO:0042393;histone binding;0.0172948239834382!GO:0051128;regulation of cellular component organization and biogenesis;0.0172948239834382!GO:0043189;H4/H2A histone acetyltransferase complex;0.0174903211734851!GO:0000084;S phase of mitotic cell cycle;0.0177057679530054!GO:0001558;regulation of cell growth;0.0177703283807772!GO:0004177;aminopeptidase activity;0.0183489867557348!GO:0035267;NuA4 histone acetyltransferase complex;0.0185841879153254!GO:0009124;nucleoside monophosphate biosynthetic process;0.0185864677250863!GO:0009123;nucleoside monophosphate metabolic process;0.0185864677250863!GO:0030518;steroid hormone receptor signaling pathway;0.0189527315138334!GO:0016125;sterol metabolic process;0.0189722793024125!GO:0006338;chromatin remodeling;0.01921886612952!GO:0000152;nuclear ubiquitin ligase complex;0.0195791299994354!GO:0030833;regulation of actin filament polymerization;0.0200377043454399!GO:0006509;membrane protein ectodomain proteolysis;0.0206212801823664!GO:0033619;membrane protein proteolysis;0.0206212801823664!GO:0006778;porphyrin metabolic process;0.0207698398293571!GO:0033013;tetrapyrrole metabolic process;0.0207698398293571!GO:0008299;isoprenoid biosynthetic process;0.0207698398293571!GO:0046112;nucleobase biosynthetic process;0.0219487499104097!GO:0046128;purine ribonucleoside metabolic process;0.0219487499104097!GO:0042278;purine nucleoside metabolic process;0.0219487499104097!GO:0022411;cellular component disassembly;0.0221185281005115!GO:0000781;chromosome, telomeric region;0.0224605602395177!GO:0005669;transcription factor TFIID complex;0.0226059555503193!GO:0006376;mRNA splice site selection;0.0226395649374694!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0226395649374694!GO:0030508;thiol-disulfide exchange intermediate activity;0.0228111545317458!GO:0008154;actin polymerization and/or depolymerization;0.0228422161128798!GO:0005663;DNA replication factor C complex;0.0229349647106933!GO:0051053;negative regulation of DNA metabolic process;0.0231925882058922!GO:0004523;ribonuclease H activity;0.0233526841861288!GO:0006497;protein amino acid lipidation;0.0233933689267389!GO:0005773;vacuole;0.0238839368627281!GO:0045893;positive regulation of transcription, DNA-dependent;0.0245636885577071!GO:0030125;clathrin vesicle coat;0.0249031245289804!GO:0030665;clathrin coated vesicle membrane;0.0249031245289804!GO:0030032;lamellipodium biogenesis;0.0250291118027564!GO:0030119;AP-type membrane coat adaptor complex;0.0253529723999183!GO:0006607;NLS-bearing substrate import into nucleus;0.0261102459279864!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0261714397608805!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0264676022114482!GO:0010257;NADH dehydrogenase complex assembly;0.0264676022114482!GO:0033108;mitochondrial respiratory chain complex assembly;0.0264676022114482!GO:0000793;condensed chromosome;0.0267298013238294!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0267298013238294!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0267298013238294!GO:0006779;porphyrin biosynthetic process;0.0270677047327224!GO:0033014;tetrapyrrole biosynthetic process;0.0270677047327224!GO:0000123;histone acetyltransferase complex;0.0271479678820756!GO:0022890;inorganic cation transmembrane transporter activity;0.0273606369884843!GO:0045892;negative regulation of transcription, DNA-dependent;0.0274129838001335!GO:0006506;GPI anchor biosynthetic process;0.0277668003103553!GO:0048146;positive regulation of fibroblast proliferation;0.0277963674744587!GO:0008017;microtubule binding;0.0280477372525182!GO:0009262;deoxyribonucleotide metabolic process;0.0280922227966954!GO:0031529;ruffle organization and biogenesis;0.0280922227966954!GO:0006118;electron transport;0.0281423231765943!GO:0016197;endosome transport;0.0281423231765943!GO:0000726;non-recombinational repair;0.0282827441857931!GO:0007004;telomere maintenance via telomerase;0.0282827441857931!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0284258438540299!GO:0004448;isocitrate dehydrogenase activity;0.0284258438540299!GO:0033673;negative regulation of kinase activity;0.0284258438540299!GO:0006469;negative regulation of protein kinase activity;0.0284258438540299!GO:0016581;NuRD complex;0.0284258438540299!GO:0008632;apoptotic program;0.0288122919564664!GO:0008287;protein serine/threonine phosphatase complex;0.0298000875138418!GO:0031371;ubiquitin conjugating enzyme complex;0.0299382692486318!GO:0000118;histone deacetylase complex;0.030501829370734!GO:0045045;secretory pathway;0.0309905868443676!GO:0051098;regulation of binding;0.031181146237083!GO:0006979;response to oxidative stress;0.0316179703215814!GO:0048144;fibroblast proliferation;0.0321709610156488!GO:0048145;regulation of fibroblast proliferation;0.0321709610156488!GO:0051320;S phase;0.0324175105087244!GO:0006400;tRNA modification;0.0325649288577677!GO:0003756;protein disulfide isomerase activity;0.0325649288577677!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0325649288577677!GO:0051348;negative regulation of transferase activity;0.0327608685448015!GO:0030911;TPR domain binding;0.0332874446723763!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0333061505843128!GO:0045039;protein import into mitochondrial inner membrane;0.0333061505843128!GO:0006505;GPI anchor metabolic process;0.0333197242551808!GO:0019783;small conjugating protein-specific protease activity;0.0334594167876222!GO:0003887;DNA-directed DNA polymerase activity;0.0334594167876222!GO:0005875;microtubule associated complex;0.0344088119086352!GO:0006892;post-Golgi vesicle-mediated transport;0.0352055832618887!GO:0006739;NADP metabolic process;0.0362218942271177!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0362386913873745!GO:0005784;translocon complex;0.0362709908074911!GO:0006221;pyrimidine nucleotide biosynthetic process;0.0363048436745871!GO:0004843;ubiquitin-specific protease activity;0.0367912100670318!GO:0008243;plasminogen activator activity;0.036800399983146!GO:0008276;protein methyltransferase activity;0.0369600210920458!GO:0009161;ribonucleoside monophosphate metabolic process;0.0370461849132195!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0370461849132195!GO:0030659;cytoplasmic vesicle membrane;0.0371682093645319!GO:0006984;ER-nuclear signaling pathway;0.0377937093521161!GO:0004722;protein serine/threonine phosphatase activity;0.0387898443347334!GO:0008234;cysteine-type peptidase activity;0.0388406997483526!GO:0009119;ribonucleoside metabolic process;0.0397797099564432!GO:0005881;cytoplasmic microtubule;0.0399755365493744!GO:0006360;transcription from RNA polymerase I promoter;0.0405787543606853!GO:0008097;5S rRNA binding;0.0411818861923051!GO:0016417;S-acyltransferase activity;0.0415504490756248!GO:0050178;phenylpyruvate tautomerase activity;0.0420409938569489!GO:0030131;clathrin adaptor complex;0.0424259895870872!GO:0005680;anaphase-promoting complex;0.0427411082081832!GO:0017134;fibroblast growth factor binding;0.0440868995795338!GO:0005099;Ras GTPase activator activity;0.0444471428709796!GO:0006266;DNA ligation;0.0449797899776197!GO:0009225;nucleotide-sugar metabolic process;0.0455013235048314!GO:0030503;regulation of cell redox homeostasis;0.0457284745464446!GO:0000097;sulfur amino acid biosynthetic process;0.0457284745464446!GO:0031577;spindle checkpoint;0.0461493849665546!GO:0008143;poly(A) binding;0.046283650997443!GO:0000175;3'-5'-exoribonuclease activity;0.0465859272419373!GO:0030433;ER-associated protein catabolic process;0.046759714942841!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.046759714942841!GO:0004239;methionyl aminopeptidase activity;0.0473631162624911!GO:0030384;phosphoinositide metabolic process;0.0477851559898159!GO:0007243;protein kinase cascade;0.0479984591500232!GO:0008629;induction of apoptosis by intracellular signals;0.0481631603446406!GO:0043130;ubiquitin binding;0.0482969442123251!GO:0032182;small conjugating protein binding;0.0482969442123251!GO:0003985;acetyl-CoA C-acetyltransferase activity;0.0486253262028147!GO:0042026;protein refolding;0.0491452303455414!GO:0006733;oxidoreduction coenzyme metabolic process;0.0492928633092326!GO:0016311;dephosphorylation;0.0494015290744369!GO:0042168;heme metabolic process;0.0495217854578043
 
|sample_id=11454
 
|sample_id=11454
 
|sample_note=
 
|sample_note=
Line 76: Line 100:
 
|sample_tissue=skin
 
|sample_tissue=skin
 
|top_motifs=TFDP1:1.67595613984;PAX8:1.52957468842;NKX3-1:1.52211650036;GFI1:1.26125689755;E2F1..5:1.26037034626;NR3C1:0.989433927156;NFY{A,B,C}:0.969734912176;POU1F1:0.956314739142;NKX2-2,8:0.948645997771;TOPORS:0.863409971478;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.848443719654;MYB:0.842195534786;ZNF238:0.835710371665;PDX1:0.792172630582;ALX4:0.76707529735;HOXA9_MEIS1:0.757452863353;PAX3,7:0.737948671584;EN1,2:0.724934472606;GFI1B:0.723154958952;ZNF143:0.681420339247;GZF1:0.657519405889;SOX17:0.642109026414;NRF1:0.584521376513;T:0.582326872584;YY1:0.550275450567;HBP1_HMGB_SSRP1_UBTF:0.548274392951;ELK1,4_GABP{A,B1}:0.543008316039;HES1:0.54232371422;PBX1:0.535380569614;ONECUT1,2:0.531789176807;POU2F1..3:0.530729642103;SPZ1:0.529887274459;HOX{A5,B5}:0.522148767923;UFEwm:0.470432393341;FOXD3:0.463618101567;ZIC1..3:0.43686748303;RXR{A,B,G}:0.400019746213;AHR_ARNT_ARNT2:0.394111890587;NANOG{mouse}:0.380080127144;PRRX1,2:0.378771519768;XBP1:0.366522793361;XCPE1{core}:0.344591610622;MZF1:0.344167918721;PITX1..3:0.338527826877;PAX4:0.336451427635;TEAD1:0.318567368327;KLF4:0.310115052244;BACH2:0.303968751187;BREu{core}:0.301794605291;TAL1_TCF{3,4,12}:0.276322199195;PAX1,9:0.276176376378;TFAP2{A,C}:0.271191552636;NFIX:0.233687351837;AIRE:0.222694578108;NKX6-1,2:0.219129674771;LEF1_TCF7_TCF7L1,2:0.208184252049;NKX2-3_NKX2-5:0.208121100242;FOS_FOS{B,L1}_JUN{B,D}:0.200447486997;PAX5:0.189610877809;AR:0.185959021643;NR1H4:0.180111745285;FOXP1:0.178146598319;PRDM1:0.17058378757;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.168108355693;NR5A1,2:0.152657720689;TLX1..3_NFIC{dimer}:0.148121690691;TFAP4:0.146625939149;TBX4,5:0.136871269402;NKX3-2:0.130806531005;bHLH_family:0.129930846605;CREB1:0.122647677122;CEBPA,B_DDIT3:0.102670741473;MYBL2:0.099601770375;NKX2-1,4:0.0961489363831;ZBTB16:0.085591269858;CDC5L:0.081903253721;TP53:0.0791332718203;HOX{A4,D4}:0.0645289564368;GCM1,2:0.0490320575131;STAT5{A,B}:0.0457150051;HIC1:0.0435328629813;EVI1:0.0405867977815;NFE2L2:0.0399095867708;POU3F1..4:0.0397545477187;FOXL1:0.0352278166727;LHX3,4:0.0350950037743;ALX1:0.0222128317813;TEF:0.019528061077;SOX{8,9,10}:0.0172752246972;GATA4:0.00859048165708;NFE2L1:0.00620360277469;HLF:0.00332701553886;SRF:-0.00510209697104;TFAP2B:-0.00562373423941;CRX:-0.0156575287286;CDX1,2,4:-0.019110834766;GTF2I:-0.0287078963057;ELF1,2,4:-0.0311271575403;NANOG:-0.0387152231652;ESR1:-0.0420796113886;FOSL2:-0.0539508392749;STAT1,3:-0.0704702340037;HNF1A:-0.0806488397988;HIF1A:-0.0825895524006;RXRA_VDR{dimer}:-0.0842456339039;TGIF1:-0.08647389092;NFATC1..3:-0.0987524864028;HNF4A_NR2F1,2:-0.104671315492;ATF6:-0.105376596928;IKZF1:-0.12286943148;IKZF2:-0.123748885736;ZFP161:-0.126566878463;FOXQ1:-0.147191870694;NFE2:-0.149162096347;VSX1,2:-0.153807953071;GTF2A1,2:-0.158682318123;SOX5:-0.162086279596;NR6A1:-0.164430655922;FOX{I1,J2}:-0.179739096432;HSF1,2:-0.189661807421;ZBTB6:-0.207081238588;DBP:-0.210074169771;MTF1:-0.238923961135;PATZ1:-0.239542948555;HOX{A6,A7,B6,B7}:-0.240247046289;RFX1:-0.254022300936;TBP:-0.254181724434;FOXA2:-0.255126144534;RFX2..5_RFXANK_RFXAP:-0.272206668643;POU5F1:-0.293227319276;RUNX1..3:-0.295836290275;MEF2{A,B,C,D}:-0.310581609822;TFCP2:-0.313933518883;ATF4:-0.317982215651;OCT4_SOX2{dimer}:-0.318115532225;SP1:-0.324046624919;NFKB1_REL_RELA:-0.329899606223;MED-1{core}:-0.337579896277;ARID5B:-0.340710911285;ESRRA:-0.344124435043;HAND1,2:-0.345014386414;SPI1:-0.348146370654;GATA6:-0.349214122623;ZNF384:-0.353315181513;DMAP1_NCOR{1,2}_SMARC:-0.366101072889;FOXM1:-0.384346910752;REST:-0.384917352692;ATF5_CREB3:-0.398347145734;EGR1..3:-0.403973340842;MTE{core}:-0.408874346677;NHLH1,2:-0.44698601003;MYFfamily:-0.471724613346;POU6F1:-0.479805279043;STAT2,4,6:-0.481144585739;MAZ:-0.483317563784;SOX2:-0.490892871926;JUN:-0.4928227733;ATF2:-0.499233146332;RREB1:-0.506068393302;ADNP_IRX_SIX_ZHX:-0.506346912117;SPIB:-0.508138238748;GLI1..3:-0.510132762711;CUX2:-0.51346621633;PPARG:-0.519033138202;PAX2:-0.523060186011;ETS1,2:-0.52525855483;ZNF423:-0.562761491839;EBF1:-0.563749639814;ZNF148:-0.587840840186;BPTF:-0.607276626056;MAFB:-0.608721423021;FOXO1,3,4:-0.647267734395;FOX{F1,F2,J1}:-0.694506320343;HMGA1,2:-0.695818156789;SMAD1..7,9:-0.704743582173;EP300:-0.713722242241;RBPJ:-0.757716736918;SNAI1..3:-0.758394277942;HMX1:-0.764299589795;FOXN1:-0.772269338774;IRF7:-0.776045695487;PAX6:-0.820834342268;IRF1,2:-0.858162864979;MYOD1:-0.874294329367;NFIL3:-0.890267151939;FOXP3:-0.894624653839;ZEB1:-0.9061851099;LMO2:-0.952043320263;RORA:-0.978261796982;SREBF1,2:-1.04213168879;FOX{D1,D2}:-1.12688877085;TLX2:-1.48108567146
 
|top_motifs=TFDP1:1.67595613984;PAX8:1.52957468842;NKX3-1:1.52211650036;GFI1:1.26125689755;E2F1..5:1.26037034626;NR3C1:0.989433927156;NFY{A,B,C}:0.969734912176;POU1F1:0.956314739142;NKX2-2,8:0.948645997771;TOPORS:0.863409971478;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.848443719654;MYB:0.842195534786;ZNF238:0.835710371665;PDX1:0.792172630582;ALX4:0.76707529735;HOXA9_MEIS1:0.757452863353;PAX3,7:0.737948671584;EN1,2:0.724934472606;GFI1B:0.723154958952;ZNF143:0.681420339247;GZF1:0.657519405889;SOX17:0.642109026414;NRF1:0.584521376513;T:0.582326872584;YY1:0.550275450567;HBP1_HMGB_SSRP1_UBTF:0.548274392951;ELK1,4_GABP{A,B1}:0.543008316039;HES1:0.54232371422;PBX1:0.535380569614;ONECUT1,2:0.531789176807;POU2F1..3:0.530729642103;SPZ1:0.529887274459;HOX{A5,B5}:0.522148767923;UFEwm:0.470432393341;FOXD3:0.463618101567;ZIC1..3:0.43686748303;RXR{A,B,G}:0.400019746213;AHR_ARNT_ARNT2:0.394111890587;NANOG{mouse}:0.380080127144;PRRX1,2:0.378771519768;XBP1:0.366522793361;XCPE1{core}:0.344591610622;MZF1:0.344167918721;PITX1..3:0.338527826877;PAX4:0.336451427635;TEAD1:0.318567368327;KLF4:0.310115052244;BACH2:0.303968751187;BREu{core}:0.301794605291;TAL1_TCF{3,4,12}:0.276322199195;PAX1,9:0.276176376378;TFAP2{A,C}:0.271191552636;NFIX:0.233687351837;AIRE:0.222694578108;NKX6-1,2:0.219129674771;LEF1_TCF7_TCF7L1,2:0.208184252049;NKX2-3_NKX2-5:0.208121100242;FOS_FOS{B,L1}_JUN{B,D}:0.200447486997;PAX5:0.189610877809;AR:0.185959021643;NR1H4:0.180111745285;FOXP1:0.178146598319;PRDM1:0.17058378757;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.168108355693;NR5A1,2:0.152657720689;TLX1..3_NFIC{dimer}:0.148121690691;TFAP4:0.146625939149;TBX4,5:0.136871269402;NKX3-2:0.130806531005;bHLH_family:0.129930846605;CREB1:0.122647677122;CEBPA,B_DDIT3:0.102670741473;MYBL2:0.099601770375;NKX2-1,4:0.0961489363831;ZBTB16:0.085591269858;CDC5L:0.081903253721;TP53:0.0791332718203;HOX{A4,D4}:0.0645289564368;GCM1,2:0.0490320575131;STAT5{A,B}:0.0457150051;HIC1:0.0435328629813;EVI1:0.0405867977815;NFE2L2:0.0399095867708;POU3F1..4:0.0397545477187;FOXL1:0.0352278166727;LHX3,4:0.0350950037743;ALX1:0.0222128317813;TEF:0.019528061077;SOX{8,9,10}:0.0172752246972;GATA4:0.00859048165708;NFE2L1:0.00620360277469;HLF:0.00332701553886;SRF:-0.00510209697104;TFAP2B:-0.00562373423941;CRX:-0.0156575287286;CDX1,2,4:-0.019110834766;GTF2I:-0.0287078963057;ELF1,2,4:-0.0311271575403;NANOG:-0.0387152231652;ESR1:-0.0420796113886;FOSL2:-0.0539508392749;STAT1,3:-0.0704702340037;HNF1A:-0.0806488397988;HIF1A:-0.0825895524006;RXRA_VDR{dimer}:-0.0842456339039;TGIF1:-0.08647389092;NFATC1..3:-0.0987524864028;HNF4A_NR2F1,2:-0.104671315492;ATF6:-0.105376596928;IKZF1:-0.12286943148;IKZF2:-0.123748885736;ZFP161:-0.126566878463;FOXQ1:-0.147191870694;NFE2:-0.149162096347;VSX1,2:-0.153807953071;GTF2A1,2:-0.158682318123;SOX5:-0.162086279596;NR6A1:-0.164430655922;FOX{I1,J2}:-0.179739096432;HSF1,2:-0.189661807421;ZBTB6:-0.207081238588;DBP:-0.210074169771;MTF1:-0.238923961135;PATZ1:-0.239542948555;HOX{A6,A7,B6,B7}:-0.240247046289;RFX1:-0.254022300936;TBP:-0.254181724434;FOXA2:-0.255126144534;RFX2..5_RFXANK_RFXAP:-0.272206668643;POU5F1:-0.293227319276;RUNX1..3:-0.295836290275;MEF2{A,B,C,D}:-0.310581609822;TFCP2:-0.313933518883;ATF4:-0.317982215651;OCT4_SOX2{dimer}:-0.318115532225;SP1:-0.324046624919;NFKB1_REL_RELA:-0.329899606223;MED-1{core}:-0.337579896277;ARID5B:-0.340710911285;ESRRA:-0.344124435043;HAND1,2:-0.345014386414;SPI1:-0.348146370654;GATA6:-0.349214122623;ZNF384:-0.353315181513;DMAP1_NCOR{1,2}_SMARC:-0.366101072889;FOXM1:-0.384346910752;REST:-0.384917352692;ATF5_CREB3:-0.398347145734;EGR1..3:-0.403973340842;MTE{core}:-0.408874346677;NHLH1,2:-0.44698601003;MYFfamily:-0.471724613346;POU6F1:-0.479805279043;STAT2,4,6:-0.481144585739;MAZ:-0.483317563784;SOX2:-0.490892871926;JUN:-0.4928227733;ATF2:-0.499233146332;RREB1:-0.506068393302;ADNP_IRX_SIX_ZHX:-0.506346912117;SPIB:-0.508138238748;GLI1..3:-0.510132762711;CUX2:-0.51346621633;PPARG:-0.519033138202;PAX2:-0.523060186011;ETS1,2:-0.52525855483;ZNF423:-0.562761491839;EBF1:-0.563749639814;ZNF148:-0.587840840186;BPTF:-0.607276626056;MAFB:-0.608721423021;FOXO1,3,4:-0.647267734395;FOX{F1,F2,J1}:-0.694506320343;HMGA1,2:-0.695818156789;SMAD1..7,9:-0.704743582173;EP300:-0.713722242241;RBPJ:-0.757716736918;SNAI1..3:-0.758394277942;HMX1:-0.764299589795;FOXN1:-0.772269338774;IRF7:-0.776045695487;PAX6:-0.820834342268;IRF1,2:-0.858162864979;MYOD1:-0.874294329367;NFIL3:-0.890267151939;FOXP3:-0.894624653839;ZEB1:-0.9061851099;LMO2:-0.952043320263;RORA:-0.978261796982;SREBF1,2:-1.04213168879;FOX{D1,D2}:-1.12688877085;TLX2:-1.48108567146
 +
|xref=
 +
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11454-119A5;search_select_hide=table117:FF:11454-119A5
 
}}
 
}}

Latest revision as of 09:02, 4 June 2020

Name:Fibroblast - Dermal, donor5
Species:Human (Homo sapiens)
Library ID:CNhs12055
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueskin
dev stagefetus
sexunknown
agefetal
cell typefibroblast
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number4823
catalog numberSC2305
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005417
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12055 CAGE DRX008258 DRR009130
Accession ID Hg19

Library idBAMCTSS
CNhs12055 DRZ000555 DRZ001940
Accession ID Hg38

Library idBAMCTSS
CNhs12055 DRZ011905 DRZ013290
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.113
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.533
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0267
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.118
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.325
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.418
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.223
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.157
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.697
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0204
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.563
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0652
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.0935
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.122
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.444
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.122
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.39
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12055

Jaspar motifP-value
MA0002.20.0465
MA0003.10.339
MA0004.10.574
MA0006.10.507
MA0007.10.49
MA0009.10.383
MA0014.10.903
MA0017.10.0998
MA0018.20.131
MA0019.10.356
MA0024.12.28299e-9
MA0025.10.337
MA0027.10.628
MA0028.10.0059
MA0029.10.447
MA0030.10.0182
MA0031.10.0155
MA0035.20.0358
MA0038.10.00153
MA0039.20.462
MA0040.10.575
MA0041.10.241
MA0042.10.312
MA0043.10.0123
MA0046.10.949
MA0047.20.65
MA0048.11.77699e-4
MA0050.17.99237e-8
MA0051.14.93849e-6
MA0052.10.919
MA0055.11.42895e-4
MA0057.10.486
MA0058.10.797
MA0059.10.2
MA0060.11.14632e-10
MA0061.10.00522
MA0062.20.277
MA0065.20.0547
MA0066.10.779
MA0067.10.18
MA0068.10.294
MA0069.10.613
MA0070.10.383
MA0071.10.656
MA0072.10.884
MA0073.10.785
MA0074.10.56
MA0076.10.00959
MA0077.10.72
MA0078.10.913
MA0079.20.134
MA0080.26.13827e-12
MA0081.10.112
MA0083.10.639
MA0084.10.152
MA0087.10.524
MA0088.19.4015e-4
MA0090.10.606
MA0091.10.403
MA0092.10.528
MA0093.10.63
MA0099.20.891
MA0100.10.0501
MA0101.10.0566
MA0102.27.67054e-4
MA0103.11.13031e-4
MA0104.20.0314
MA0105.10.0447
MA0106.10.204
MA0107.10.00318
MA0108.20.156
MA0111.10.688
MA0112.20.0162
MA0113.10.938
MA0114.10.197
MA0115.10.959
MA0116.10.144
MA0117.10.813
MA0119.10.758
MA0122.10.32
MA0124.10.483
MA0125.10.225
MA0131.10.159
MA0135.10.715
MA0136.15.32639e-7
MA0137.20.079
MA0138.20.848
MA0139.10.303
MA0140.10.298
MA0141.10.903
MA0142.10.342
MA0143.10.501
MA0144.10.0518
MA0145.10.0261
MA0146.10.339
MA0147.10.0427
MA0148.10.434
MA0149.10.981
MA0150.10.185
MA0152.10.0283
MA0153.10.279
MA0154.10.00886
MA0155.10.126
MA0156.10.0247
MA0157.10.0469
MA0159.10.0138
MA0160.10.273
MA0162.10.336
MA0163.10.841
MA0164.10.655
MA0258.10.0375
MA0259.10.0767



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12055

Novel motifP-value
10.716
100.178
1000.573
1010.608
1020.445
1030.0276
1040.792
1050.575
1060.00355
1070.194
1080.225
1090.888
110.973
1100.421
1110.948
1120.0535
1130.0106
1140.228
1150.866
1160.389
1170.8
1180.683
1190.0973
120.512
1200.178
1210.655
1220.119
1230.402
1240.156
1250.654
1260.841
1270.605
1280.0322
1290.0943
130.937
1300.00733
1310.53
1320.865
1330.989
1340.517
1350.0492
1360.237
1370.0455
1380.0972
1393.41692e-5
140.0827
1400.8
1410.791
1420.541
1430.59
1440.519
1450.425
1460.707
1470.457
1480.412
1490.236
150.264
1500.79
1510.207
1520.13
1530.47
1540.457
1550.0536
1560.547
1570.0976
1580.0288
1590.0319
160.635
1600.479
1610.879
1620.677
1630.563
1640.773
1650.138
1660.958
1670.643
1680.48
1690.0911
170.404
180.686
190.777
20.51
200.196
210.137
220.268
230.036
240.656
250.775
260.328
270.521
280.334
290.916
30.722
300.403
310.451
320.816
330.478
340.327
350.477
360.664
370.545
380.345
390.725
40.11
400.48
410.256
420.865
430.22
440.628
450.045
460.486
470.954
480.618
490.263
50.122
500.571
510.61
520.186
530.341
540.608
550.737
560.764
570.778
580.131
590.378
60.697
600.0331
610.989
620.243
630.975
640.708
650.155
660.0758
670.791
680.707
690.663
70.424
700.00671
710.983
720.176
730.501
740.225
750.473
760.955
770.777
780.71
790.696
80.81
800.0634
810.375
820.0081
830.213
840.967
850.013
860.464
870.129
880.322
890.169
90.692
900.627
910.46
920.252
930.724
940.951
950.242
960.303
970.88
980.225
990.0632



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12055


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002620 (skin fibroblast)
0002551 (fibroblast of dermis)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002097 (skin of body)
0002199 (integument)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0004923 (organ component layer)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003102 (surface structure)
0010317 (germ layer / neural crest derived structure)
0002067 (dermis)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000250 (human fibroblast of skin sample)
0000001 (sample)
0000062 (human dermal fibroblast sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)