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{{f5samples
{{f5samples
|id=FF:11891-125E1
|DRA_sample_Accession=CAGE@SAMD00005506
|name=Hep-2 cells treated with Streptococci strain 5448, biol_rep2
|accession_numbers=CAGE;DRX007786;DRR008658;DRZ000083;DRZ001468;DRZ011433;DRZ012818
|sample_id=11891
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001737,UBERON:0000064,UBERON:0004119,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000072,UBERON:0010317,UBERON:0000065,UBERON:0001004,UBERON:0001557
|rna_tube_id=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000255
|rna_box=125
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:305
|rna_position=E1
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0000625,FF:0000350,FF:0000632,FF:0104978,FF:0000638,FF:0100297,FF:0101120,FF:0011133
|sample_cell_lot=
|comment=
|sample_cell_catalog=
|created_by=
|sample_company=
|creation_date=
|rna_lot_number=1b
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr6:10415276..10415341,-!p2@TFAP2A!1.69!57.52!TFAP2A;;chr6:126240380..126240430,+!p2@NCOA7!1.54!85.41!NCOA7;;chr6:10415484..10415508,-!p3@TFAP2A!1.53!32.90!TFAP2A;;chr2:238592039..238592054,+!p4@LRRFIP1!1.49!29.63!LRRFIP1;;chr5:134369905..134369972,-!p1@PITX1!1.47!42.70!PITX1;;chr6:1312325..1312340,+!p1@FOXQ1!1.46!45.10!FOXQ1;;chr6:126240442..126240459,+!p4@NCOA7!1.39!29.85!NCOA7;;chr6:10412600..10412637,-!p1@TFAP2A!1.35!35.08!TFAP2A;;chr1:201979743..201979762,+!p1@ELF3!1.30!18.96!ELF3;;chr6:126240463..126240489,+!p6@NCOA7!1.29!20.70!NCOA7;;chr5:134369879..134369898,-!p2@PITX1!1.26!17.21!PITX1;;chr5:170736243..170736279,+!p1@TLX3!1.24!16.56!TLX3;;chr6:1389789..1389821,+!p1@FOXF2!1.22!21.57!FOXF2;;chr6:126240356..126240379,+!p7@NCOA7!1.20!18.30!NCOA7;;chr1:201979703..201979721,+!p2@ELF3!1.16!13.51!ELF3;;chr12:54380036..54380091,+!p4@HOXC10!1.16!13.51!HOXC10;;chr22:19748231..19748317,+!p1@TBX1!1.13!12.64!TBX1;;chr18:55102598..55102623,+!p1@ONECUT2!1.09!11.33!ONECUT2;;chr18:55102628..55102646,+!p2@ONECUT2!1.08!10.89!ONECUT2;;chrX:131624056..131624069,-!p2@MBNL3!1.07!14.60!MBNL3;;chr1:44513995..44514031,+!p1@KLF17!1.06!10.46!KLF17;;chr9:100615499..100615519,+!p1@FOXE1!1.04!10.02!FOXE1;;chr12:54380404..54380433,+!p3@HOXC10!1.02!9.59!HOXC10;;chr12:54332608..54332636,+!p1@HOXC13!1.02!9.37!HOXC13;;chr7:101917447..101917479,+!p4@CUX1!0.98!8.50!CUX1;;chr20:6748325..6748352,+!p1@BMP2!0.96!11.77!BMP2;;chr17:46682321..46682362,-!p1@HOXB6!0.96!8.06!HOXB6;;chr10:104155659..104155676,+!p4@NFKB2!0.95!10.02!NFKB2;;chr6:10412576..10412599,-!p5@TFAP2A!0.95!7.84!TFAP2A;;chr17:46687959..46688007,-!p2@HOXB7!0.94!10.68!HOXB7;;chr5:170736216..170736238,+!p2@TLX3!0.94!7.63!TLX3;;chr12:54378923..54378966,+!p1@HOXC10!0.94!7.63!HOXC10;;chr3:69915385..69915438,+!p3@MITF!0.94!7.63!MITF;;chr13:73633131..73633149,+!p1@KLF5!0.91!80.40!KLF5;;chr6:31126291..31126399,+!p1@TCF19!0.90!69.94!TCF19;;chr16:29818199..29818216,+!p11@MAZ!0.90!11.77!MAZ;;chr6:10412392..10412409,-!p4@TFAP2A!0.88!7.63!TFAP2A;;chr10:28034739..28034756,-!p1@MKX!0.88!6.54!MKX;;chr11:34663913..34663945,+!p6@EHF!0.88!6.54!EHF;;chr7:27224842..27224872,-!p1@HOXA11!0.84!5.88!HOXA11;;chr20:42295745..42295765,+!p1@MYBL2!0.81!96.74!MYBL2;;chr21:38071430..38071456,+!p1@SIM2!0.79!5.23!SIM2;;chr7:27239703..27239715,-!p1@HOXA13!0.79!5.23!HOXA13;;chr8:128748308..128748324,+!p2@MYC!0.78!153.82!MYC;;chr17:17726907..17726958,-!p2@SREBF1!0.78!34.21!SREBF1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.78!5.01!SEBOX;;chr6:10415263..10415274,-!p8@TFAP2A!0.78!5.01!TFAP2A;;chr7:101917482..101917507,+!p6@CUX1!0.78!5.01!CUX1;;chr12:3068544..3068597,+!p1@TEAD4!0.77!31.81!TEAD4;;chr10:51572408..51572454,+!p3@NCOA4!0.77!30.94!NCOA4;;chr12:80084737..80084763,-!p3@PAWR!0.76!19.17!PAWR;;chr5:321810..321877,+!p1@AHRR!0.76!16.56!AHRR;;chr7:101917407..101917443,+!p3@CUX1!0.76!4.79!CUX1;;chrX:70503529..70503549,+!p2@NONO!0.75!27.02!NONO;;chr2:178129853..178129860,-!p14@NFE2L2!0.75!4.58!NFE2L2;;chr1:8938709..8938720,-!p3@ENO1!0.74!243.81!ENO1;;chr3:128206762..128206781,-!p2@GATA2!0.74!30.72!GATA2;;chr12:7079780..7079791,-!p2@PHB2!0.74!25.71!PHB2;;chrX:131623044..131623089,-!p1@MBNL3!0.74!20.48!MBNL3;;chr17:7492684..7492778,-!p2@SOX15!0.74!10.24!SOX15;;chr20:42295713..42295738,+!p2@MYBL2!0.73!28.76!MYBL2;;chr12:54379029..54379057,+!p2@HOXC10!0.73!4.36!HOXC10;;chr14:37131058..37131139,+!p1@PAX9!0.73!4.36!PAX9;;chr2:45236540..45236577,-!p1@SIX2!0.73!4.36!SIX2;;chr6:1389989..1390019,+!p2@FOXF2!0.73!4.36!FOXF2;;chr2:172967621..172967637,-!p1@DLX2!0.71!11.98!DLX2;;chrX:131622958..131622978,-!p3@MBNL3!0.71!5.45!MBNL3;;chr3:69915369..69915381,+!p4@MITF!0.71!4.14!MITF;;chr11:34664014..34664045,+!p4@EHF!0.71!4.14!EHF;;chr17:46806067..46806097,-!p1@HOXB13!0.71!4.14!HOXB13;;chr1:23885981..23886002,-!p1@ID3!0.69!777.61!ID3;;chr12:52445218..52445237,+!p1@NR4A1!0.69!56.87!NR4A1;;chr9:99180617..99180658,-!p1@ZNF367!0.69!9.37!ZNF367;;chr15:67418119..67418162,+!p5@SMAD3!0.69!4.36!SMAD3;;chr1:45805872..45805900,+!p2@TOE1!0.68!10.02!TOE1;;chr19:45908292..45908374,-!p1@PPP1R13L!0.67!37.91!PPP1R13L;;chr16:29818160..29818188,+!p6@MAZ!0.67!19.39!MAZ;;chr2:46524897..46524911,+!p2@EPAS1!0.67!11.33!EPAS1;;chr22:42229210..42229229,+!p3@SREBF2!0.67!9.59!SREBF2;;chr3:138665969..138665993,-!p2@FOXL2!0.67!3.70!FOXL2;;chr19:12348371..12348386,-!p5@ZNF44!0.67!3.70!ZNF44;;chr1:151804244..151804310,-!p1@RORC!0.67!3.70!RORC;;chr8:55370487..55370503,+!p1@SOX17!0.67!3.70!SOX17;;chr12:2986275..2986363,-!p1@FOXM1!0.66!42.05!FOXM1;;chr17:41277372..41277418,-!p1@BRCA1!0.66!14.82!BRCA1;;chr8:67525443..67525459,-!p2@MYBL1!0.66!5.66!MYBL1;;chr16:54964740..54964789,+!p1@IRX5!0.66!5.45!IRX5;;chr3:141087393..141087426,+!p3@ZBTB38!0.65!15.91!ZBTB38;;chr1:935398..935465,-!p2@HES4!0.65!7.84!HES4;;chr3:12330560..12330579,+!p1@PPARG!0.65!4.14!PPARG;;chr3:138665937..138665968,-!p1@FOXL2!0.65!3.49!FOXL2;;chr17:46687935..46687950,-!p3@HOXB7!0.65!3.49!HOXB7;;chr7:27224795..27224840,-!p2@HOXA11!0.65!3.49!HOXA11;;chrX:131623026..13162303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|sample_dev_stage=
|ffid_belonging_in_development=UBERON:0008947,UBERON:0002532,UBERON:0006595,UBERON:0010316
|sample_tissue=
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=56
|sample_ethnicity=
|rna_rin=9.50000
|rna_od260/230=2.08000
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Line 67: Line 40:
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binding;5.01805934015171e-83!GO:0005634;nucleus;1.23147601127416e-82!GO:0043170;macromolecule metabolic process;2.52160711971033e-78!GO:0005515;protein binding;1.99810982943963e-67!GO:0044429;mitochondrial part;1.32563893322656e-62!GO:0006396;RNA processing;1.87449481715541e-62!GO:0043234;protein complex;2.90278220395189e-60!GO:0005840;ribosome;2.90278220395189e-60!GO:0006412;translation;1.76830336695999e-58!GO:0031090;organelle membrane;1.76830336695999e-58!GO:0031967;organelle envelope;5.38128803332924e-55!GO:0031975;envelope;9.0453333209988e-55!GO:0003735;structural constituent of ribosome;3.88704676519686e-52!GO:0044249;cellular biosynthetic process;3.92923817210173e-52!GO:0031981;nuclear lumen;5.24895116439602e-52!GO:0009058;biosynthetic process;1.89693802487601e-51!GO:0016043;cellular component organization and biogenesis;4.65272943482165e-48!GO:0033279;ribosomal subunit;9.94513581291317e-46!GO:0019538;protein metabolic process;1.71581183653709e-44!GO:0006259;DNA metabolic process;2.26404948173355e-43!GO:0043228;non-membrane-bound organelle;3.51349768762891e-43!GO:0043232;intracellular non-membrane-bound organelle;3.51349768762891e-43!GO:0015031;protein transport;3.76551830727825e-43!GO:0033036;macromolecule localization;1.35102197572769e-42!GO:0016071;mRNA metabolic process;2.61289997549716e-42!GO:0005829;cytosol;2.76005966322934e-42!GO:0009059;macromolecule biosynthetic process;3.82911935307152e-42!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.38018823722628e-41!GO:0008380;RNA splicing;3.15351764382335e-40!GO:0005740;mitochondrial envelope;3.74372653010803e-40!GO:0043283;biopolymer metabolic process;7.43760470733903e-40!GO:0044260;cellular macromolecule metabolic process;2.7109850340431e-39!GO:0045184;establishment of protein localization;2.95408853777177e-39!GO:0044267;cellular protein metabolic process;6.86563444359284e-39!GO:0008104;protein localization;1.40369936025154e-38!GO:0006397;mRNA processing;2.40200523338987e-38!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.5743791703726e-38!GO:0019866;organelle inner membrane;5.02919704523757e-38!GO:0031966;mitochondrial membrane;1.16712580573626e-37!GO:0010467;gene expression;5.32453740477905e-36!GO:0005743;mitochondrial inner membrane;1.0319026405995e-35!GO:0065003;macromolecular complex assembly;1.4935129584593e-35!GO:0006996;organelle organization and biogenesis;5.52304001100221e-35!GO:0046907;intracellular transport;1.54433105110236e-33!GO:0007049;cell cycle;8.58470584420944e-33!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.98631506375018e-31!GO:0022607;cellular component assembly;2.85066524566015e-30!GO:0005654;nucleoplasm;8.85813890321952e-30!GO:0005681;spliceosome;2.25991730863615e-29!GO:0000166;nucleotide binding;9.22666896375652e-29!GO:0006886;intracellular protein transport;1.14262603099432e-28!GO:0031980;mitochondrial lumen;1.07503161400105e-27!GO:0005759;mitochondrial matrix;1.07503161400105e-27!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.99418791554999e-26!GO:0016462;pyrophosphatase activity;2.09781728781102e-26!GO:0016817;hydrolase activity, acting on acid anhydrides;2.97081228924139e-26!GO:0006974;response to DNA damage stimulus;7.87946184672931e-26!GO:0005730;nucleolus;9.34519228650922e-26!GO:0006119;oxidative phosphorylation;1.36334151456452e-25!GO:0044445;cytosolic part;1.98660808363595e-25!GO:0017111;nucleoside-triphosphatase activity;2.31290096666918e-25!GO:0015934;large ribosomal subunit;1.34558246440358e-24!GO:0044455;mitochondrial membrane part;1.53262756891959e-24!GO:0022402;cell cycle process;3.98590141721165e-24!GO:0000278;mitotic cell cycle;4.11933312703394e-24!GO:0044451;nucleoplasm part;1.568551366007e-23!GO:0005694;chromosome;1.80942071100787e-23!GO:0015935;small ribosomal subunit;2.53769827588511e-22!GO:0012505;endomembrane system;3.91579479713816e-22!GO:0051186;cofactor metabolic process;5.51033722150408e-22!GO:0006281;DNA repair;1.02260760479524e-21!GO:0003676;nucleic acid binding;1.03568676139163e-21!GO:0005783;endoplasmic reticulum;1.17277573380214e-21!GO:0044427;chromosomal part;1.17277573380214e-21!GO:0006457;protein folding;1.50816977014739e-21!GO:0016874;ligase activity;2.46605639416215e-21!GO:0051649;establishment of cellular localization;3.47120679984136e-21!GO:0051641;cellular localization;4.70069560792258e-21!GO:0006260;DNA replication;2.66252294048503e-20!GO:0042254;ribosome biogenesis and assembly;7.1363986309376e-20!GO:0032553;ribonucleotide binding;8.02929617592403e-20!GO:0032555;purine ribonucleotide binding;8.02929617592403e-20!GO:0017076;purine nucleotide binding;1.10615663474505e-19!GO:0009719;response to endogenous stimulus;4.45599192618563e-19!GO:0005746;mitochondrial respiratory chain;5.12640979754258e-19!GO:0022618;protein-RNA complex assembly;5.59311758731171e-19!GO:0022403;cell cycle phase;7.25207136413656e-19!GO:0005761;mitochondrial ribosome;8.03581694269881e-19!GO:0000313;organellar ribosome;8.03581694269881e-19!GO:0044432;endoplasmic reticulum part;9.36845867793677e-19!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.47771932495134e-18!GO:0005524;ATP binding;9.8213568928557e-18!GO:0032559;adenyl ribonucleotide binding;1.24414490098284e-17!GO:0006732;coenzyme metabolic process;1.61194602043682e-17!GO:0044248;cellular catabolic process;1.95369529598174e-17!GO:0044265;cellular macromolecule catabolic process;2.11492876751546e-17!GO:0000087;M phase of mitotic cell cycle;2.57527129714733e-17!GO:0030554;adenyl nucleotide binding;2.87741694058823e-17!GO:0000502;proteasome complex (sensu Eukaryota);3.03606530684597e-17!GO:0016887;ATPase activity;3.64400020498743e-17!GO:0007067;mitosis;4.64621407645205e-17!GO:0050136;NADH dehydrogenase (quinone) activity;4.95383697599273e-17!GO:0003954;NADH dehydrogenase activity;4.95383697599273e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.95383697599273e-17!GO:0042623;ATPase activity, coupled;1.22754613957073e-16!GO:0008135;translation factor activity, nucleic acid binding;1.50946704251423e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.05694321118934e-16!GO:0051276;chromosome organization and biogenesis;3.82322644557735e-16!GO:0006512;ubiquitin cycle;4.58278962931233e-16!GO:0006399;tRNA metabolic process;5.5261641551721e-16!GO:0051301;cell division;1.1108436551884e-15!GO:0044453;nuclear membrane part;1.23888186945734e-15!GO:0006605;protein targeting;1.48961942625082e-15!GO:0005635;nuclear envelope;1.67259748380669e-15!GO:0042775;organelle ATP synthesis coupled electron transport;2.79206041469461e-15!GO:0042773;ATP synthesis coupled electron transport;2.79206041469461e-15!GO:0051082;unfolded protein binding;4.9309657078243e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;5.70692765187034e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.02843166419953e-15!GO:0030964;NADH dehydrogenase complex (quinone);6.02843166419953e-15!GO:0045271;respiratory chain complex I;6.02843166419953e-15!GO:0005747;mitochondrial respiratory chain complex I;6.02843166419953e-15!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.16586110658311e-15!GO:0031965;nuclear membrane;7.6464275637732e-15!GO:0000279;M phase;9.72170858265203e-15!GO:0019941;modification-dependent protein catabolic process;1.00663995271227e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.00663995271227e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;1.27219282596576e-14!GO:0000375;RNA splicing, via transesterification reactions;1.27219282596576e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.27219282596576e-14!GO:0044257;cellular protein catabolic process;1.43808460695402e-14!GO:0005789;endoplasmic reticulum membrane;1.63044878260062e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.80568983286444e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.40619242565787e-14!GO:0009057;macromolecule catabolic process;2.55615486682829e-14!GO:0048770;pigment granule;2.5754691531029e-14!GO:0042470;melanosome;2.5754691531029e-14!GO:0043285;biopolymer catabolic process;5.28349200041661e-14!GO:0008134;transcription factor binding;5.84422346551741e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.92403142534504e-14!GO:0006364;rRNA processing;1.0524489508654e-13!GO:0009055;electron carrier activity;1.15922047441849e-13!GO:0016072;rRNA metabolic process;2.93967713513013e-13!GO:0005643;nuclear pore;3.0277221342812e-13!GO:0000074;regulation of progression through cell cycle;4.15552765189268e-13!GO:0051726;regulation of cell cycle;4.65473462556364e-13!GO:0016070;RNA metabolic process;6.07345879000278e-13!GO:0003743;translation initiation factor activity;6.14401803804783e-13!GO:0009259;ribonucleotide metabolic process;6.78415728478644e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;7.38102250662e-13!GO:0000785;chromatin;8.16253001456065e-13!GO:0006413;translational initiation;1.7588752576691e-12!GO:0006913;nucleocytoplasmic transport;2.08503894488669e-12!GO:0048193;Golgi vesicle transport;2.32389426059496e-12!GO:0006163;purine nucleotide metabolic process;2.37063059205845e-12!GO:0006323;DNA packaging;2.40460093860271e-12!GO:0065002;intracellular protein transport across a membrane;3.24897292183897e-12!GO:0051188;cofactor biosynthetic process;4.00397007700443e-12!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.16919322712825e-12!GO:0051169;nuclear transport;6.834616075629e-12!GO:0050657;nucleic acid transport;7.58612817729775e-12!GO:0051236;establishment of RNA localization;7.58612817729775e-12!GO:0050658;RNA transport;7.58612817729775e-12!GO:0006403;RNA localization;9.194858943555e-12!GO:0012501;programmed cell death;1.33380016707354e-11!GO:0016604;nuclear body;1.446945949872e-11!GO:0004386;helicase activity;1.55635204884899e-11!GO:0006915;apoptosis;2.34374456261668e-11!GO:0030163;protein catabolic process;2.67475147538176e-11!GO:0006333;chromatin assembly or disassembly;2.71143107138727e-11!GO:0009150;purine ribonucleotide metabolic process;2.79913340114248e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.34778600096633e-11!GO:0009260;ribonucleotide biosynthetic process;3.6273527713091e-11!GO:0046930;pore complex;3.79731718188794e-11!GO:0008026;ATP-dependent helicase activity;4.61040151123594e-11!GO:0006164;purine nucleotide biosynthetic process;5.14512319844514e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.20260878204588e-11!GO:0005794;Golgi apparatus;8.71450463238791e-11!GO:0065004;protein-DNA complex assembly;9.06808150734613e-11!GO:0016491;oxidoreductase activity;1.09666914161837e-10!GO:0009117;nucleotide metabolic process;1.18423642163131e-10!GO:0006446;regulation of translational initiation;2.2333571412997e-10!GO:0007005;mitochondrion organization and biogenesis;2.39543969771744e-10!GO:0006461;protein complex assembly;2.76335541930685e-10!GO:0016192;vesicle-mediated transport;3.108039677173e-10!GO:0009199;ribonucleoside triphosphate metabolic process;3.33685626671237e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.44874330686751e-10!GO:0008219;cell death;3.69346492008782e-10!GO:0016265;death;3.69346492008782e-10!GO:0009141;nucleoside triphosphate metabolic process;4.03716628417579e-10!GO:0009060;aerobic respiration;4.39301185497313e-10!GO:0006261;DNA-dependent DNA replication;4.5517234291612e-10!GO:0008565;protein transporter activity;4.89663692074607e-10!GO:0009056;catabolic process;4.93066759907044e-10!GO:0051028;mRNA transport;4.96210724213049e-10!GO:0009108;coenzyme biosynthetic process;5.61410648070766e-10!GO:0009152;purine ribonucleotide biosynthetic process;5.97645315238792e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.48924475125265e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.70024562331637e-10!GO:0004812;aminoacyl-tRNA ligase activity;6.70024562331637e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.70024562331637e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.36498796709631e-10!GO:0009144;purine nucleoside triphosphate metabolic process;8.36498796709631e-10!GO:0043412;biopolymer modification;8.84270997355478e-10!GO:0006366;transcription from RNA polymerase II promoter;1.19640870544205e-09!GO:0030532;small nuclear ribonucleoprotein complex;1.24823673348516e-09!GO:0016779;nucleotidyltransferase activity;1.26787096974869e-09!GO:0015986;ATP synthesis coupled proton transport;1.26787096974869e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.26787096974869e-09!GO:0043038;amino acid activation;1.52622663463612e-09!GO:0006418;tRNA aminoacylation for protein translation;1.52622663463612e-09!GO:0043039;tRNA aminoacylation;1.52622663463612e-09!GO:0008639;small protein conjugating enzyme activity;1.67759891650609e-09!GO:0045333;cellular respiration;1.90924454827692e-09!GO:0009142;nucleoside triphosphate biosynthetic process;2.41725835903289e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.41725835903289e-09!GO:0003697;single-stranded DNA binding;2.52143359224632e-09!GO:0046034;ATP metabolic process;2.73896178317947e-09!GO:0016787;hydrolase activity;3.14634667161162e-09!GO:0017038;protein import;3.17582896051279e-09!GO:0043566;structure-specific DNA binding;4.35418254652679e-09!GO:0006334;nucleosome assembly;5.03203398624436e-09!GO:0004842;ubiquitin-protein ligase activity;5.39493181544063e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.47703263624058e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.47703263624058e-09!GO:0016607;nuclear speck;6.96343425219843e-09!GO:0019829;cation-transporting ATPase activity;7.81127254125653e-09!GO:0019787;small conjugating protein ligase activity;8.08880798541628e-09!GO:0031497;chromatin assembly;1.36644032828042e-08!GO:0006754;ATP biosynthetic process;1.74663642601422e-08!GO:0006753;nucleoside phosphate metabolic process;1.74663642601422e-08!GO:0006752;group transfer coenzyme metabolic process;1.97503823105451e-08!GO:0005793;ER-Golgi intermediate compartment;2.37304972428462e-08!GO:0006099;tricarboxylic acid cycle;2.54899026984202e-08!GO:0046356;acetyl-CoA catabolic process;2.54899026984202e-08!GO:0005819;spindle;2.69714250330258e-08!GO:0051329;interphase of mitotic cell cycle;2.76618203906514e-08!GO:0000775;chromosome, pericentric region;2.85523951077038e-08!GO:0016881;acid-amino acid ligase activity;2.87783369606106e-08!GO:0003712;transcription cofactor activity;3.14410419880096e-08!GO:0006084;acetyl-CoA metabolic process;3.22867416588207e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.15282549295116e-08!GO:0016469;proton-transporting two-sector ATPase complex;4.42454504633134e-08!GO:0051325;interphase;5.26248723536972e-08!GO:0042981;regulation of apoptosis;6.67292846039157e-08!GO:0016740;transferase activity;6.93452262292551e-08!GO:0043067;regulation of programmed cell death;7.02609161260846e-08!GO:0006464;protein modification process;8.71546458825611e-08!GO:0008033;tRNA processing;1.16167571127174e-07!GO:0006091;generation of precursor metabolites and energy;1.37129631024258e-07!GO:0005657;replication fork;1.87965488377389e-07!GO:0051187;cofactor catabolic process;2.11747672269792e-07!GO:0045259;proton-transporting ATP synthase complex;3.49557762113039e-07!GO:0003899;DNA-directed RNA polymerase activity;3.57262770452697e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.71532478554525e-07!GO:0005762;mitochondrial large ribosomal subunit;4.01282236130513e-07!GO:0000315;organellar large ribosomal subunit;4.01282236130513e-07!GO:0005768;endosome;4.12778795436851e-07!GO:0009109;coenzyme catabolic process;4.35137802394304e-07!GO:0043623;cellular protein complex assembly;4.42362056811546e-07!GO:0005667;transcription factor complex;5.80261912189492e-07!GO:0006888;ER to Golgi vesicle-mediated transport;6.51986858850807e-07!GO:0005839;proteasome core complex (sensu Eukaryota);6.74980206311365e-07!GO:0030120;vesicle coat;6.84126320858792e-07!GO:0030662;coated vesicle membrane;6.84126320858792e-07!GO:0008094;DNA-dependent ATPase activity;7.30437787557908e-07!GO:0043069;negative regulation of programmed cell death;7.49473920787617e-07!GO:0016568;chromatin modification;7.79896243925344e-07!GO:0015630;microtubule cytoskeleton;7.8158979298087e-07!GO:0000075;cell cycle checkpoint;8.90866982751877e-07!GO:0043687;post-translational protein modification;9.19728784775143e-07!GO:0032446;protein modification by small protein conjugation;9.53552414446768e-07!GO:0006916;anti-apoptosis;1.09553790729141e-06!GO:0043066;negative regulation of apoptosis;1.17749243618512e-06!GO:0009165;nucleotide biosynthetic process;1.33551808733902e-06!GO:0008654;phospholipid biosynthetic process;1.34811216604338e-06!GO:0016853;isomerase activity;1.50686091239943e-06!GO:0000245;spliceosome assembly;1.66070933556814e-06!GO:0048475;coated membrane;1.71921347404663e-06!GO:0030117;membrane coat;1.71921347404663e-06!GO:0016567;protein ubiquitination;1.74420234402358e-06!GO:0007051;spindle organization and biogenesis;1.75366965942008e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.79158808873336e-06!GO:0051427;hormone receptor binding;2.10737850893094e-06!GO:0051170;nuclear import;2.25866638775533e-06!GO:0044452;nucleolar part;2.51959454407629e-06!GO:0003724;RNA helicase activity;2.76725505144714e-06!GO:0000079;regulation of cyclin-dependent protein kinase activity;2.76725505144714e-06!GO:0004298;threonine endopeptidase activity;3.56636665285683e-06!GO:0019752;carboxylic acid metabolic process;3.63916298965689e-06!GO:0006082;organic acid metabolic process;3.65916771774049e-06!GO:0051246;regulation of protein metabolic process;3.93406203179141e-06!GO:0000314;organellar small ribosomal subunit;4.50185918040807e-06!GO:0005763;mitochondrial small ribosomal subunit;4.50185918040807e-06!GO:0048523;negative regulation of cellular process;4.64663184298736e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.65820451462869e-06!GO:0035257;nuclear hormone receptor binding;5.15790789694711e-06!GO:0051168;nuclear export;5.70427551585508e-06!GO:0046483;heterocycle metabolic process;5.94966513089416e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.82266345553901e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;7.27928392514456e-06!GO:0006613;cotranslational protein targeting to membrane;7.27928392514456e-06!GO:0006606;protein import into nucleus;8.4529259961879e-06!GO:0000786;nucleosome;8.58799917123776e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;9.4376589427317e-06!GO:0003924;GTPase activity;9.5903758884209e-06!GO:0006302;double-strand break repair;1.1389848248821e-05!GO:0005788;endoplasmic reticulum lumen;1.19916503618621e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.24965487510643e-05!GO:0015399;primary active transmembrane transporter activity;1.24965487510643e-05!GO:0003682;chromatin binding;1.27086595607236e-05!GO:0000151;ubiquitin ligase complex;1.40320068119112e-05!GO:0045454;cell redox homeostasis;2.20579203325233e-05!GO:0006414;translational elongation;2.33789552471882e-05!GO:0015980;energy derivation by oxidation of organic compounds;2.4954514220816e-05!GO:0006626;protein targeting to mitochondrion;2.64843056414046e-05!GO:0046474;glycerophospholipid biosynthetic process;2.69037401455994e-05!GO:0008168;methyltransferase activity;3.15575821917911e-05!GO:0031324;negative regulation of cellular metabolic process;3.17236548739012e-05!GO:0005813;centrosome;3.22312268249121e-05!GO:0016741;transferase activity, transferring one-carbon groups;3.75025599293011e-05!GO:0006839;mitochondrial transport;4.03334252121419e-05!GO:0003713;transcription coactivator activity;4.77326676775085e-05!GO:0043681;protein import into mitochondrion;5.64832098045444e-05!GO:0019867;outer membrane;5.82334109379788e-05!GO:0030867;rough endoplasmic reticulum membrane;6.19846878416973e-05!GO:0005815;microtubule organizing center;6.29181986774446e-05!GO:0005770;late endosome;6.70157361045788e-05!GO:0044440;endosomal part;6.89596532430115e-05!GO:0010008;endosome membrane;6.89596532430115e-05!GO:0051052;regulation of DNA metabolic process;6.97369829246036e-05!GO:0045786;negative regulation of progression through cell cycle;7.71706439605432e-05!GO:0043021;ribonucleoprotein binding;8.02904903214777e-05!GO:0031968;organelle outer membrane;8.09731464411139e-05!GO:0005753;mitochondrial proton-transporting ATP synthase complex;8.12241773779326e-05!GO:0007088;regulation of mitosis;8.15635358643247e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;8.17061941479309e-05!GO:0016126;sterol biosynthetic process;8.35624471748161e-05!GO:0003690;double-stranded DNA binding;8.55070130989765e-05!GO:0051789;response to protein stimulus;8.88625363914951e-05!GO:0006986;response to unfolded protein;8.88625363914951e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;9.49442040753252e-05!GO:0003684;damaged DNA binding;9.56179871156325e-05!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;9.63809309664415e-05!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;9.66680223819475e-05!GO:0005525;GTP binding;9.76280571046779e-05!GO:0008186;RNA-dependent ATPase activity;9.78460217291123e-05!GO:0005773;vacuole;9.78686522911044e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000102263963231466!GO:0016859;cis-trans isomerase activity;0.000102503202226272!GO:0046489;phosphoinositide biosynthetic process;0.000103208071774446!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000104397368204061!GO:0009892;negative regulation of metabolic process;0.000106682066232358!GO:0006793;phosphorus metabolic process;0.000111887054907975!GO:0006796;phosphate metabolic process;0.000111887054907975!GO:0008610;lipid biosynthetic process;0.000112159536308596!GO:0000776;kinetochore;0.000124172060703874!GO:0050662;coenzyme binding;0.000137312878969306!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000139334571853062!GO:0048519;negative regulation of biological process;0.000147118526724021!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000152741731658329!GO:0048471;perinuclear region of cytoplasm;0.000160512305689284!GO:0004527;exonuclease activity;0.000167315960859168!GO:0005791;rough endoplasmic reticulum;0.000171418531888852!GO:0007059;chromosome segregation;0.000179662478211986!GO:0004518;nuclease activity;0.000208801297356383!GO:0006310;DNA recombination;0.000209522126862376!GO:0043284;biopolymer biosynthetic process;0.000213792271463891!GO:0000059;protein import into nucleus, docking;0.000239359520196874!GO:0044431;Golgi apparatus part;0.00026174018473593!GO:0006695;cholesterol biosynthetic process;0.000269976073109789!GO:0004004;ATP-dependent RNA helicase activity;0.000274586165907522!GO:0006612;protein targeting to membrane;0.00028086119860094!GO:0006383;transcription from RNA polymerase III promoter;0.000288391421517431!GO:0005741;mitochondrial outer membrane;0.000288466022723248!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000298582676960569!GO:0000323;lytic vacuole;0.000316102306960049!GO:0005764;lysosome;0.000316102306960049!GO:0030880;RNA polymerase complex;0.000318417236857749!GO:0016363;nuclear matrix;0.000330366923723188!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000369964566382542!GO:0005798;Golgi-associated vesicle;0.000376002791853747!GO:0008361;regulation of cell size;0.000382633484233399!GO:0043492;ATPase activity, coupled to movement of substances;0.000382831296685341!GO:0006520;amino acid metabolic process;0.000389027849939796!GO:0001558;regulation of cell growth;0.000394214263502642!GO:0048037;cofactor binding;0.000403756145344825!GO:0019843;rRNA binding;0.000413437918393485!GO:0016049;cell growth;0.000413437918393485!GO:0016310;phosphorylation;0.000423417137649795!GO:0033116;ER-Golgi intermediate compartment membrane;0.000427428309331203!GO:0009112;nucleobase metabolic process;0.000427509044826836!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000434023514463874!GO:0003678;DNA helicase activity;0.000434367740278901!GO:0042802;identical protein binding;0.000442851055160911!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000453191061184963!GO:0016563;transcription activator activity;0.00048641560647012!GO:0030176;integral to endoplasmic reticulum membrane;0.000491860271819087!GO:0051920;peroxiredoxin activity;0.000492316611124766!GO:0044262;cellular carbohydrate metabolic process;0.000495731595742452!GO:0016564;transcription repressor activity;0.000501656515610339!GO:0005048;signal sequence binding;0.000508162589226357!GO:0043596;nuclear replication fork;0.000535024804812864!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000547231172867827!GO:0005684;U2-dependent spliceosome;0.000547231172867827!GO:0031252;leading edge;0.000581361992398217!GO:0003729;mRNA binding;0.000585037561187829!GO:0006275;regulation of DNA replication;0.000585037561187829!GO:0007006;mitochondrial membrane organization and biogenesis;0.000601530926507473!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000603044394911856!GO:0006650;glycerophospholipid metabolic process;0.000615793595230006!GO:0015992;proton transport;0.000622323061009521!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000641927438692054!GO:0006818;hydrogen transport;0.000732504330799452!GO:0006284;base-excision repair;0.000753306713171638!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.000781484402849399!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000781484402849399!GO:0000428;DNA-directed RNA polymerase complex;0.000781484402849399!GO:0065009;regulation of a molecular function;0.000795656870715094!GO:0031988;membrane-bound vesicle;0.000815439201798557!GO:0005885;Arp2/3 protein complex;0.000815439201798557!GO:0031072;heat shock protein binding;0.000817778551381085!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000829074028385118!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000829074028385118!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000829074028385118!GO:0035258;steroid hormone receptor binding;0.000867670355358623!GO:0006506;GPI anchor biosynthetic process;0.00086785613858594!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.000891379683325164!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.000891379683325164!GO:0051087;chaperone binding;0.000954403651816307!GO:0032561;guanyl ribonucleotide binding;0.000966938303856191!GO:0019001;guanyl nucleotide binding;0.000966938303856191!GO:0006270;DNA replication initiation;0.00098797444016377!GO:0032508;DNA duplex unwinding;0.00101203388155931!GO:0032392;DNA geometric change;0.00101203388155931!GO:0016023;cytoplasmic membrane-bound vesicle;0.00102424536635258!GO:0051540;metal cluster binding;0.00103302408879038!GO:0051536;iron-sulfur cluster binding;0.00103302408879038!GO:0030132;clathrin coat of coated pit;0.00103999056855199!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00104455030166395!GO:0006007;glucose catabolic process;0.00106297957278923!GO:0006118;electron transport;0.00107697362135217!GO:0006611;protein export from nucleus;0.00110882168380456!GO:0007052;mitotic spindle organization and biogenesis;0.00113787170729883!GO:0046467;membrane lipid biosynthetic process;0.00120527441696874!GO:0003711;transcription elongation regulator activity;0.00123390336803944!GO:0006405;RNA export from nucleus;0.00125167456739446!GO:0000082;G1/S transition of mitotic cell cycle;0.0012888186250079!GO:0051287;NAD binding;0.00136092190696372!GO:0000049;tRNA binding;0.00137461889058058!GO:0009116;nucleoside metabolic process;0.00139084375047924!GO:0006505;GPI anchor metabolic process;0.00146882451395757!GO:0048487;beta-tubulin binding;0.0014895024405901!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00150245029505977!GO:0000139;Golgi membrane;0.00157670916414284!GO:0048500;signal recognition particle;0.00158298608943791!GO:0042770;DNA damage response, signal transduction;0.00161640934049969!GO:0008312;7S RNA binding;0.00162307320934066!GO:0005905;coated pit;0.00167656847491511!GO:0006401;RNA catabolic process;0.00168389446683637!GO:0008180;signalosome;0.00191063200018246!GO:0051252;regulation of RNA metabolic process;0.00202947146145784!GO:0030384;phosphoinositide metabolic process;0.00206678022877057!GO:0007093;mitotic cell cycle checkpoint;0.00210362165751886!GO:0016044;membrane organization and biogenesis;0.0021232505743959!GO:0006268;DNA unwinding during replication;0.00214194204999484!GO:0006767;water-soluble vitamin metabolic process;0.00214790153802026!GO:0030118;clathrin coat;0.00232518143840096!GO:0008632;apoptotic program;0.00236069451776689!GO:0005769;early endosome;0.00239503514306611!GO:0009451;RNA modification;0.00240882289820537!GO:0006950;response to stress;0.00252941370770588!GO:0016272;prefoldin complex;0.00252941370770588!GO:0048522;positive regulation of cellular process;0.002551889373181!GO:0008408;3'-5' exonuclease activity;0.00265292804817792!GO:0003746;translation elongation factor activity;0.00268700257600842!GO:0006497;protein amino acid lipidation;0.00269411807984848!GO:0003714;transcription corepressor activity;0.00269411807984848!GO:0005876;spindle microtubule;0.00271335825297611!GO:0030663;COPI coated vesicle membrane;0.00277505445209904!GO:0030126;COPI vesicle coat;0.00277505445209904!GO:0005637;nuclear inner membrane;0.00287661744108375!GO:0043601;nuclear replisome;0.00294033062642811!GO:0030894;replisome;0.00294033062642811!GO:0000178;exosome (RNase complex);0.00306279657219973!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00306625114010744!GO:0000096;sulfur amino acid metabolic process;0.00314747496197497!GO:0008022;protein C-terminus binding;0.00332112863525079!GO:0022890;inorganic cation transmembrane transporter activity;0.00356308993427231!GO:0040008;regulation of growth;0.00360844862739001!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00368366065927385!GO:0045047;protein targeting to ER;0.00368366065927385!GO:0000086;G2/M transition of mitotic cell cycle;0.00380158774878486!GO:0042393;histone binding;0.00380959494659853!GO:0006144;purine base metabolic process;0.00389539656094805!GO:0006595;polyamine metabolic process;0.00390417776202393!GO:0006519;amino acid and derivative metabolic process;0.0039286018480195!GO:0031982;vesicle;0.004003881731284!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00416148592015697!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00424108499022222!GO:0004532;exoribonuclease activity;0.00439023149994723!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00439023149994723!GO:0007243;protein kinase cascade;0.00439904152776288!GO:0006733;oxidoreduction coenzyme metabolic process;0.00487514963370153!GO:0006402;mRNA catabolic process;0.00503709906217315!GO:0045792;negative regulation of cell size;0.00509348961712937!GO:0016481;negative regulation of transcription;0.00516045448625669!GO:0006891;intra-Golgi vesicle-mediated transport;0.00521672452160294!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00522500321337457!GO:0015002;heme-copper terminal oxidase activity;0.00522500321337457!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00522500321337457!GO:0004129;cytochrome-c oxidase activity;0.00522500321337457!GO:0006352;transcription initiation;0.00529031915494589!GO:0006778;porphyrin metabolic process;0.00544282782243762!GO:0033013;tetrapyrrole metabolic process;0.00544282782243762!GO:0030308;negative regulation of cell growth;0.00545155144253796!GO:0005758;mitochondrial intermembrane space;0.00553357648094477!GO:0031410;cytoplasmic vesicle;0.00558103429790332!GO:0008320;protein transmembrane transporter activity;0.00560830291228573!GO:0016125;sterol metabolic process;0.00568409364426461!GO:0006066;alcohol metabolic process;0.00568409364426461!GO:0004526;ribonuclease P activity;0.00569494744199071!GO:0006509;membrane protein ectodomain proteolysis;0.00587237865951192!GO:0033619;membrane protein proteolysis;0.00587237865951192!GO:0004549;tRNA-specific ribonuclease activity;0.00640865339647704!GO:0008629;induction of apoptosis by intracellular signals;0.00647560926907383!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.006477671194902!GO:0016408;C-acyltransferase activity;0.00648533121381107!GO:0008139;nuclear localization sequence binding;0.00649940196353232!GO:0030137;COPI-coated vesicle;0.00681140492310712!GO:0031570;DNA integrity checkpoint;0.00681140492310712!GO:0000287;magnesium ion binding;0.00687764184863762!GO:0009124;nucleoside monophosphate biosynthetic process;0.00687764184863762!GO:0009123;nucleoside monophosphate metabolic process;0.00687764184863762!GO:0008637;apoptotic mitochondrial changes;0.00721686073198894!GO:0000228;nuclear chromosome;0.00739222637846619!GO:0015631;tubulin binding;0.00780749256689021!GO:0008652;amino acid biosynthetic process;0.00795519233908295!GO:0006400;tRNA modification;0.00799338997875257!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00799338997875257!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00804681846374183!GO:0030658;transport vesicle membrane;0.00808730490949655!GO:0050790;regulation of catalytic activity;0.00808730490949655!GO:0006807;nitrogen compound metabolic process;0.00808730490949655!GO:0031124;mRNA 3'-end processing;0.00809226368837158!GO:0046983;protein dimerization activity;0.00829349207151889!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00845445541673697!GO:0046982;protein heterodimerization activity;0.00860556577837769!GO:0016407;acetyltransferase activity;0.00862189065975747!GO:0006096;glycolysis;0.00880141844268254!GO:0019899;enzyme binding;0.00896266112435187!GO:0005832;chaperonin-containing T-complex;0.0093814474893255!GO:0042158;lipoprotein biosynthetic process;0.00946427188217551!GO:0051539;4 iron, 4 sulfur cluster binding;0.00964472805152513!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.00973840730380945!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00973840730380945!GO:0003725;double-stranded RNA binding;0.00975850456881387!GO:0006289;nucleotide-excision repair;0.00990808251540445!GO:0009303;rRNA transcription;0.0100451284747433!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0100483476347899!GO:0030119;AP-type membrane coat adaptor complex;0.0100728903724924!GO:0043065;positive regulation of apoptosis;0.0102023546297953!GO:0007021;tubulin folding;0.0102134425870606!GO:0000922;spindle pole;0.0102402605354875!GO:0004540;ribonuclease activity;0.0103086430474662!GO:0005874;microtubule;0.0103592681867386!GO:0022884;macromolecule transmembrane transporter activity;0.0105742204730005!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0105742204730005!GO:0051338;regulation of transferase activity;0.0105742204730005!GO:0044255;cellular lipid metabolic process;0.0106209618805911!GO:0050794;regulation of cellular process;0.0106894636417159!GO:0043022;ribosome binding;0.0108701289967286!GO:0030125;clathrin vesicle coat;0.0109804519102861!GO:0030665;clathrin coated vesicle membrane;0.0109804519102861!GO:0007050;cell cycle arrest;0.0109839213653866!GO:0043154;negative regulation of caspase activity;0.0110165601902884!GO:0016251;general RNA polymerase II transcription factor activity;0.0110212385233926!GO:0000339;RNA cap binding;0.0112215305517213!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0115147916039645!GO:0050681;androgen receptor binding;0.0119696232261963!GO:0030521;androgen receptor signaling pathway;0.0120229780831972!GO:0007010;cytoskeleton organization and biogenesis;0.0120535138623817!GO:0004523;ribonuclease H activity;0.0121017349495374!GO:0043624;cellular protein complex disassembly;0.0121239503421418!GO:0006740;NADPH regeneration;0.0121239503421418!GO:0006098;pentose-phosphate shunt;0.0121239503421418!GO:0009119;ribonucleoside metabolic process;0.0122093730822338!GO:0043433;negative regulation of transcription factor activity;0.0122335247753706!GO:0030131;clathrin adaptor complex;0.0123566284151889!GO:0043068;positive regulation of programmed cell death;0.0125346698250844!GO:0004003;ATP-dependent DNA helicase activity;0.0128437832776236!GO:0000175;3'-5'-exoribonuclease activity;0.0129920556930421!GO:0005862;muscle thin filament tropomyosin;0.0132537571524014!GO:0030659;cytoplasmic vesicle membrane;0.0136362875640185!GO:0046966;thyroid hormone receptor binding;0.0136362875640185!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0137633868406982!GO:0006779;porphyrin biosynthetic process;0.0137633868406982!GO:0033014;tetrapyrrole biosynthetic process;0.0137633868406982!GO:0030660;Golgi-associated vesicle membrane;0.0137778002369647!GO:0043414;biopolymer methylation;0.0139246013048201!GO:0043549;regulation of kinase activity;0.0141426725000117!GO:0046365;monosaccharide catabolic process;0.0142737378260487!GO:0043488;regulation of mRNA stability;0.0143080771367815!GO:0043487;regulation of RNA stability;0.0143080771367815!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0143080771367815!GO:0005996;monosaccharide metabolic process;0.0143080771367815!GO:0032259;methylation;0.0143838815249555!GO:0000725;recombinational repair;0.0149434755995927!GO:0000724;double-strand break repair via homologous recombination;0.0149434755995927!GO:0007034;vacuolar transport;0.0150792955121279!GO:0030133;transport vesicle;0.0150895535221865!GO:0009308;amine metabolic process;0.0150968456885793!GO:0009161;ribonucleoside monophosphate metabolic process;0.0151793440169452!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0151793440169452!GO:0031902;late endosome membrane;0.0156825154815107!GO:0019318;hexose metabolic process;0.0158012686237532!GO:0006417;regulation of translation;0.0159839059619884!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0160885061361762!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0163575904115644!GO:0045039;protein import into mitochondrial inner membrane;0.0163575904115644!GO:0006338;chromatin remodeling;0.0163575904115644!GO:0006378;mRNA polyadenylation;0.0164093200213197!GO:0004860;protein kinase inhibitor activity;0.0165369830588047!GO:0042168;heme metabolic process;0.0166906129633929!GO:0007017;microtubule-based process;0.0169175573602954!GO:0048146;positive regulation of fibroblast proliferation;0.0174808784251672!GO:0031970;organelle envelope lumen;0.0179683161476892!GO:0003702;RNA polymerase II transcription factor activity;0.0180980475961466!GO:0005663;DNA replication factor C complex;0.0187505054021066!GO:0016788;hydrolase activity, acting on ester bonds;0.018809770515943!GO:0008234;cysteine-type peptidase activity;0.0189796977608783!GO:0044438;microbody part;0.0190374977877194!GO:0044439;peroxisomal part;0.0190374977877194!GO:0050178;phenylpyruvate tautomerase activity;0.0195711171419673!GO:0048144;fibroblast proliferation;0.0197274896524156!GO:0048145;regulation of fibroblast proliferation;0.0197274896524156!GO:0046519;sphingoid metabolic process;0.0200688444676977!GO:0017166;vinculin binding;0.0207863325847819!GO:0008538;proteasome activator activity;0.0208099942917432!GO:0031529;ruffle organization and biogenesis;0.0208540908670145!GO:0000070;mitotic sister chromatid segregation;0.0210112946203313!GO:0046164;alcohol catabolic process;0.0213192505617753!GO:0045859;regulation of protein kinase activity;0.0214107868852195!GO:0000030;mannosyltransferase activity;0.0214107868852195!GO:0007346;regulation of progression through mitotic cell cycle;0.0214685788982936!GO:0006979;response to oxidative stress;0.0216939197484795!GO:0006006;glucose metabolic process;0.0218341782703493!GO:0005669;transcription factor TFIID complex;0.0224687461504372!GO:0030508;thiol-disulfide exchange intermediate activity;0.0225595189367008!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0226996698594912!GO:0051059;NF-kappaB binding;0.0227140894633029!GO:0019320;hexose catabolic process;0.0227472175679422!GO:0032984;macromolecular complex disassembly;0.0227472175679422!GO:0006360;transcription from RNA polymerase I promoter;0.0229514435679197!GO:0031123;RNA 3'-end processing;0.0233667865120895!GO:0016197;endosome transport;0.0237983402257955!GO:0006354;RNA elongation;0.0240211122728646!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0241740835103387!GO:0045926;negative regulation of growth;0.0241928464175662!GO:0008250;oligosaccharyl transferase complex;0.0249689540316568!GO:0000819;sister chromatid segregation;0.0251427970316098!GO:0009003;signal peptidase activity;0.0255141529441684!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0256540778487668!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0257892556414432!GO:0006672;ceramide metabolic process;0.0260136493788796!GO:0000726;non-recombinational repair;0.0261974069081962!GO:0031903;microbody membrane;0.0266134525817672!GO:0005778;peroxisomal membrane;0.0266134525817672!GO:0051053;negative regulation of DNA metabolic process;0.0275169737706212!GO:0012506;vesicle membrane;0.0276317618308783!GO:0031326;regulation of cellular biosynthetic process;0.0276317618308783!GO:0000077;DNA damage checkpoint;0.0276498402010076!GO:0005869;dynactin complex;0.027800570988798!GO:0043189;H4/H2A histone acetyltransferase complex;0.027800570988798!GO:0006220;pyrimidine nucleotide metabolic process;0.0278026326544248!GO:0003923;GPI-anchor transamidase activity;0.028294489416014!GO:0016255;attachment of GPI anchor to protein;0.028294489416014!GO:0042765;GPI-anchor transamidase complex;0.028294489416014!GO:0006643;membrane lipid metabolic process;0.0283791375502615!GO:0008092;cytoskeletal protein binding;0.0285647569008114!GO:0044433;cytoplasmic vesicle part;0.0285863578022268!GO:0004659;prenyltransferase activity;0.0286078947732014!GO:0006730;one-carbon compound metabolic process;0.0290227007125057!GO:0005774;vacuolar membrane;0.029063455192103!GO:0005732;small nucleolar ribonucleoprotein complex;0.0292266915899388!GO:0006769;nicotinamide metabolic process;0.0293454303370705!GO:0043241;protein complex disassembly;0.0297281263847023!GO:0008203;cholesterol metabolic process;0.0298670455331995!GO:0006541;glutamine metabolic process;0.030581571440242!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0310600097946432!GO:0010257;NADH dehydrogenase complex assembly;0.0310600097946432!GO:0033108;mitochondrial respiratory chain complex assembly;0.0310600097946432!GO:0004576;oligosaccharyl transferase activity;0.0310600097946432!GO:0006596;polyamine biosynthetic process;0.0311090268735787!GO:0046822;regulation of nucleocytoplasmic transport;0.0313858773702033!GO:0004861;cyclin-dependent protein kinase inhibitor activity;0.0316678557539527!GO:0009889;regulation of biosynthetic process;0.031767104950976!GO:0001836;release of cytochrome c from mitochondria;0.031767104950976!GO:0006376;mRNA splice site selection;0.0320071836424088!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0320071836424088!GO:0006213;pyrimidine nucleoside metabolic process;0.0322746082052417!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0324536518816247!GO:0051716;cellular response to stimulus;0.032753797810924!GO:0009066;aspartate family amino acid metabolic process;0.032753797810924!GO:0006739;NADP metabolic process;0.032753797810924!GO:0050811;GABA receptor binding;0.032753797810924!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0329196020858581!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0329196020858581!GO:0000152;nuclear ubiquitin ligase complex;0.0330038683796366!GO:0045045;secretory pathway;0.0336306569621481!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0336628055082323!GO:0022411;cellular component disassembly;0.0342094101594037!GO:0016790;thiolester hydrolase activity;0.0345029583920711!GO:0000781;chromosome, telomeric region;0.0346197425503662!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0348006924017345!GO:0004448;isocitrate dehydrogenase activity;0.0348411225368823!GO:0008536;Ran GTPase binding;0.0350051220347743!GO:0007040;lysosome organization and biogenesis;0.0355149572769118!GO:0046112;nucleobase biosynthetic process;0.0358195385400346!GO:0031625;ubiquitin protein ligase binding;0.0358709399400209!GO:0044454;nuclear chromosome part;0.0361918316359411!GO:0000910;cytokinesis;0.0361918316359411!GO:0030677;ribonuclease P complex;0.0361918316359411!GO:0030134;ER to Golgi transport vesicle;0.0364047503506716!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0365877436891313!GO:0046128;purine ribonucleoside metabolic process;0.0367235432937788!GO:0042278;purine nucleoside metabolic process;0.0367235432937788!GO:0035267;NuA4 histone acetyltransferase complex;0.0372944177367165!GO:0032200;telomere organization and biogenesis;0.0372944177367165!GO:0000723;telomere maintenance;0.0372944177367165!GO:0007041;lysosomal transport;0.0373477341271625!GO:0019783;small conjugating protein-specific protease activity;0.037476345490837!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0380732048829347!GO:0005784;translocon complex;0.0387798577086067!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0396269794281235!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0403291775801941!GO:0031406;carboxylic acid binding;0.0403565724864167!GO:0030027;lamellipodium;0.0403939662820741!GO:0045893;positive regulation of transcription, DNA-dependent;0.0406660843117176!GO:0006783;heme biosynthetic process;0.0412579968088961!GO:0003985;acetyl-CoA C-acetyltransferase activity;0.0415117968556217!GO:0030127;COPII vesicle coat;0.0415836587012501!GO:0012507;ER to Golgi transport vesicle membrane;0.0415836587012501!GO:0030032;lamellipodium biogenesis;0.0416659533091489!GO:0019206;nucleoside kinase activity;0.0418125102912347!GO:0004843;ubiquitin-specific protease activity;0.0423640973519023!GO:0016417;S-acyltransferase activity;0.0427096472352083!GO:0000792;heterochromatin;0.0427626868947046!GO:0005971;ribonucleoside-diphosphate reductase complex;0.0429629585419007!GO:0008426;protein kinase C inhibitor activity;0.0431117510621403!GO:0009396;folic acid and derivative biosynthetic process;0.043148837242917!GO:0015036;disulfide oxidoreductase activity;0.0433041021316221!GO:0005658;alpha DNA polymerase:primase complex;0.0434909955793648!GO:0030433;ER-associated protein catabolic process;0.0435189608192934!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0435189608192934!GO:0030503;regulation of cell redox homeostasis;0.0443571223208201!GO:0030911;TPR domain binding;0.0447245771752718!GO:0005777;peroxisome;0.0449462726053003!GO:0042579;microbody;0.0449462726053003!GO:0008017;microtubule binding;0.0449462726053003!GO:0003756;protein disulfide isomerase activity;0.0449603873993653!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0449603873993653!GO:0005754;mitochondrial proton-transporting ATP synthase, catalytic core;0.044960582313545!GO:0000275;mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);0.044960582313545!GO:0045267;proton-transporting ATP synthase, catalytic core;0.044960582313545!GO:0031371;ubiquitin conjugating enzyme complex;0.044960582313545!GO:0006629;lipid metabolic process;0.0451052707409634!GO:0016860;intramolecular oxidoreductase activity;0.0452173722203093!GO:0009967;positive regulation of signal transduction;0.0454797818127936!GO:0009225;nucleotide-sugar metabolic process;0.0455887731975783!GO:0045936;negative regulation of phosphate metabolic process;0.0456682891421797!GO:0019362;pyridine nucleotide metabolic process;0.045790478028574!GO:0004748;ribonucleoside-diphosphate reductase activity;0.045885205273434!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.045885205273434!GO:0016453;C-acetyltransferase activity;0.046299959987544!GO:0000097;sulfur amino acid biosynthetic process;0.0468104516194516!GO:0004536;deoxyribonuclease activity;0.0472767198491032!GO:0008287;protein serine/threonine phosphatase complex;0.0472767198491032!GO:0006518;peptide metabolic process;0.047374740117256!GO:0001726;ruffle;0.0474793718927807!GO:0001522;pseudouridine synthesis;0.0475665719213489!GO:0009067;aspartate family amino acid biosynthetic process;0.0475705456296408!GO:0009081;branched chain family amino acid metabolic process;0.047713578269779!GO:0008299;isoprenoid biosynthetic process;0.0481034561711792!GO:0006458;'de novo' protein folding;0.0481034561711792!GO:0051084;'de novo' posttranslational protein folding;0.0481034561711792!GO:0018196;peptidyl-asparagine modification;0.0481034561711792!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0481034561711792!GO:0006644;phospholipid metabolic process;0.0483218358147205!GO:0008601;protein phosphatase type 2A regulator activity;0.0484311525098276!GO:0042769;DNA damage response, detection of DNA damage;0.048650161149849!GO:0016791;phosphoric monoester hydrolase activity;0.0486978315775447!GO:0051128;regulation of cellular component organization and biogenesis;0.0487027954368489
|sample_id=11891
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=
|top_motifs=ESRRA:1.81748395725;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.79285064137;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.61347357106;HES1:1.61100618428;E2F1..5:1.57919546816;PPARG:1.50618086821;FOXM1:1.47030653359;ELK1,4_GABP{A,B1}:1.21476733065;HIF1A:1.18095701727;NR5A1,2:1.1629818906;FOXQ1:1.16225315738;bHLH_family:0.974236031262;HOX{A6,A7,B6,B7}:0.868978044402;NR6A1:0.850773417963;NRF1:0.84814066537;PAX1,9:0.833979207962;YY1:0.769191752183;NKX3-2:0.759650661298;MYB:0.698228942488;NFY{A,B,C}:0.653945843184;ZNF143:0.650673118898;HNF4A_NR2F1,2:0.608207086305;SNAI1..3:0.603558290676;FOXN1:0.582658290354;PAX8:0.576062360257;GCM1,2:0.541875890336;PAX5:0.536303357533;POU1F1:0.53387260431;TEAD1:0.529519508713;NKX3-1:0.496538768465;TFDP1:0.462983284401;ZNF148:0.438930552822;IRF7:0.409793904686;NFE2L1:0.395535777728;ZEB1:0.379512486637;TBX4,5:0.379421589502;FOXD3:0.364527725829;MYOD1:0.355600789306;ARID5B:0.349514193514;VSX1,2:0.344665490519;HOX{A5,B5}:0.319400404721;LEF1_TCF7_TCF7L1,2:0.318934916543;RXR{A,B,G}:0.317269870726;FOXL1:0.305979507818;TP53:0.279442892833;BREu{core}:0.269953657765;EP300:0.269865428494;UFEwm:0.263191776701;IKZF1:0.209584114365;MYBL2:0.185157853894;GZF1:0.166361705417;CUX2:0.165893400371;CREB1:0.15743277155;GTF2A1,2:0.151918313738;PAX3,7:0.124577552893;RORA:0.122668909648;SOX{8,9,10}:0.0781176938541;ZNF423:0.0763368302251;MTF1:0.0750267151765;TEF:0.0616113036675;GFI1:0.0454593073714;HOXA9_MEIS1:0.0314343335654;FOX{I1,J2}:0.0110723580465;NFE2:0.0103248362435;PAX2:0.00305482674719;HLF:0.00203188199769;HSF1,2:-0.000919897107634;ALX4:-0.00180239809222;HNF1A:-0.00490371090153;NFE2L2:-0.00617331063664;GFI1B:-0.0063356840373;RFX2..5_RFXANK_RFXAP:-0.00911209057487;ZNF384:-0.0154689514627;PDX1:-0.0211724061678;BACH2:-0.0228586495835;LHX3,4:-0.0257362645379;FOS_FOS{B,L1}_JUN{B,D}:-0.0413996693145;EN1,2:-0.0467013258183;OCT4_SOX2{dimer}:-0.0501563837985;FOX{F1,F2,J1}:-0.0603533453311;ZBTB16:-0.0709638778629;NKX6-1,2:-0.0884538460921;AHR_ARNT_ARNT2:-0.0895445124317;ONECUT1,2:-0.0914988610864;ATF5_CREB3:-0.0962317161561;CEBPA,B_DDIT3:-0.0980383077389;POU2F1..3:-0.105782021555;NR1H4:-0.120005138553;PITX1..3:-0.153314508149;HOX{A4,D4}:-0.165118025245;TFAP2{A,C}:-0.167077002073;T:-0.178757516687;NR3C1:-0.180857223505;NANOG:-0.187257207873;ZBTB6:-0.187608706661;TBP:-0.189584583957;PRRX1,2:-0.193096864906;MEF2{A,B,C,D}:-0.209500134823;TLX1..3_NFIC{dimer}:-0.218912974493;LMO2:-0.219274870723;CDC5L:-0.228346264509;POU3F1..4:-0.231504248064;HAND1,2:-0.237849337423;EBF1:-0.243963356607;IKZF2:-0.26833977539;STAT2,4,6:-0.272770351576;TFCP2:-0.295924630694;ELF1,2,4:-0.29774647453;ATF4:-0.298524468625;NFKB1_REL_RELA:-0.299466159717;CRX:-0.300955951526;RXRA_VDR{dimer}:-0.304977723388;STAT5{A,B}:-0.312182413129;HBP1_HMGB_SSRP1_UBTF:-0.324588826705;ZFP161:-0.332906492734;CDX1,2,4:-0.333329029344;PBX1:-0.336194621676;ATF6:-0.356743975762;FOSL2:-0.366746661244;NFIL3:-0.376822486107;TFAP2B:-0.381514840133;HIC1:-0.385902628388;KLF4:-0.40234258545;JUN:-0.414977925481;BPTF:-0.437961469326;ESR1:-0.446629032336;IRF1,2:-0.449102578657;GATA6:-0.454911149459;GTF2I:-0.46141937904;DBP:-0.471440469203;SPIB:-0.473782738841;SP1:-0.49445857634;SREBF1,2:-0.500869714054;EVI1:-0.506808205993;NKX2-1,4:-0.508807050202;RFX1:-0.514312246602;GLI1..3:-0.532308270677;HMGA1,2:-0.549733469299;POU5F1:-0.55881919379;PAX4:-0.559289484949;FOXP3:-0.570861639327;SRF:-0.590833935563;ADNP_IRX_SIX_ZHX:-0.600207247757;SOX5:-0.609288366114;NKX2-2,8:-0.611836055675;PAX6:-0.628611802172;SOX17:-0.63039012522;EGR1..3:-0.632584065912;SPI1:-0.633513870442;REST:-0.639027852901;MAFB:-0.642594315061;POU6F1:-0.647921016725;NHLH1,2:-0.65006448073;RBPJ:-0.659003068497;ZIC1..3:-0.671679146648;RUNX1..3:-0.674372740461;MED-1{core}:-0.680420031166;FOXP1:-0.680532512746;SOX2:-0.697027513228;MTE{core}:-0.699214313347;FOXA2:-0.709995200098;ETS1,2:-0.720704886792;TFAP4:-0.726627392024;AIRE:-0.726921920329;ALX1:-0.733859956843;AR:-0.774396414708;ZNF238:-0.7796695623;NFATC1..3:-0.795221064959;NKX2-3_NKX2-5:-0.82284312059;TAL1_TCF{3,4,12}:-0.843707009563;XCPE1{core}:-0.847372257481;MAZ:-0.848104290621;ATF2:-0.893845521577;XBP1:-0.916479033755;FOX{D1,D2}:-0.949449617094;STAT1,3:-0.980527158714;MYFfamily:-0.986307935911;RREB1:-0.996912014516;NFIX:-0.999294865787;DMAP1_NCOR{1,2}_SMARC:-1.02335465848;TOPORS:-1.02474396718;GATA4:-1.02822929682;SMAD1..7,9:-1.0400436417;FOXO1,3,4:-1.05844864851;PRDM1:-1.15365297043;TLX2:-1.2103409419;MZF1:-1.27234322531;TGIF1:-1.30903376119;PATZ1:-1.33862185655;HMX1:-1.43032143689;NANOG{mouse}:-1.83559204556;SPZ1:-1.89297119813
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11891-125E1;search_select_hide=table117:FF:11891-125E1
}}
}}

Latest revision as of 18:27, 4 June 2020

Name:Hep-2 cells treated with Streptococci strain 5448, biol_rep2
Species:Human (Homo sapiens)
Library ID:CNhs13496
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexmale
age56
cell typeunclassifiable
cell lineHep-2
companyNA
collaborationChristine Wells (University of Queensland)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number1b
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005506
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13496 CAGE DRX007786 DRR008658
Accession ID Hg19

Library idBAMCTSS
CNhs13496 DRZ000083 DRZ001468
Accession ID Hg38

Library idBAMCTSS
CNhs13496 DRZ011433 DRZ012818
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0359
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0.779
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.469
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.0856
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0.0428
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0176
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.183
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.213
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.00614
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.0151
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.0856
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.711
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.359
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-0.0163
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.809
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.476
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.525
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0.0856
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13496

Jaspar motifP-value
MA0002.20.11
MA0003.10.908
MA0004.10.0913
MA0006.10.455
MA0007.10.266
MA0009.10.631
MA0014.10.734
MA0017.10.417
MA0018.20.884
MA0019.10.66
MA0024.16.01466e-9
MA0025.10.209
MA0027.10.908
MA0028.13.86065e-6
MA0029.10.79
MA0030.10.326
MA0031.10.216
MA0035.20.326
MA0038.10.881
MA0039.20.00919
MA0040.10.559
MA0041.10.261
MA0042.10.332
MA0043.10.276
MA0046.10.256
MA0047.20.708
MA0048.10.0744
MA0050.10.0259
MA0051.10.889
MA0052.10.0066
MA0055.11.04409e-4
MA0057.10.197
MA0058.10.0493
MA0059.10.00923
MA0060.10.0378
MA0061.10.0329
MA0062.20.00583
MA0065.20.0246
MA0066.10.634
MA0067.10.317
MA0068.18.72918e-4
MA0069.10.48
MA0070.10.471
MA0071.10.0412
MA0072.10.429
MA0073.10.265
MA0074.10.669
MA0076.15.90352e-5
MA0077.10.611
MA0078.10.524
MA0079.20.433
MA0080.29.47497e-8
MA0081.10.37
MA0083.10.0278
MA0084.10.168
MA0087.10.662
MA0088.10.0503
MA0090.10.00478
MA0091.10.694
MA0092.10.705
MA0093.10.0538
MA0099.20.162
MA0100.10.26
MA0101.10.235
MA0102.20.412
MA0103.10.0189
MA0104.24.93283e-4
MA0105.10.331
MA0106.10.716
MA0107.10.0787
MA0108.20.471
MA0111.10.81
MA0112.20.0686
MA0113.10.754
MA0114.10.0286
MA0115.10.0456
MA0116.10.738
MA0117.10.923
MA0119.10.917
MA0122.10.928
MA0124.10.883
MA0125.10.218
MA0131.10.418
MA0135.10.771
MA0136.10.00203
MA0137.20.0404
MA0138.20.0571
MA0139.10.842
MA0140.10.875
MA0141.10.00265
MA0142.10.612
MA0143.10.141
MA0144.10.445
MA0145.10.709
MA0146.10.258
MA0147.12.36108e-4
MA0148.10.217
MA0149.10.0311
MA0150.10.633
MA0152.10.358
MA0153.10.00684
MA0154.10.449
MA0155.10.232
MA0156.10.153
MA0157.10.21
MA0159.10.0983
MA0160.10.0149
MA0162.10.217
MA0163.10.397
MA0164.10.389
MA0258.10.807
MA0259.10.0143



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13496

Novel motifP-value
10.117
100.117
1000.035
1010.176
1020.686
1030.784
1040.838
1050.245
1060.013
1070.182
1080.537
1096.7025e-4
110.84
1100.333
1110.517
1120.232
1130.00269
1140.774
1150.837
1160.421
1170.263
1180.227
1190.995
120.546
1200.0601
1210.318
1220.132
1230.161
1240.842
1250.736
1260.799
1270.112
1281.14153e-4
1290.472
137.60177e-5
1300.319
1310.473
1320.379
1330.134
1340.851
1350.192
1360.00261
1370.225
1380.79
1390.0428
140.439
1400.184
1410.537
1420.673
1430.261
1440.356
1450.149
1460.962
1470.624
1480.55
1490.542
150.507
1500.717
1510.736
1520.771
1530.525
1540.339
1550.632
1560.0379
1570.0843
1580.138
1590.147
160.859
1600.375
1610.529
1620.657
1630.18
1640.0251
1650.848
1660.0349
1670.295
1680.27
1690.327
170.818
180.177
190.755
20.535
200.141
210.634
220.935
230.00734
240.782
250.186
260.738
270.964
280.815
290.0336
30.458
300.557
310.527
320.0429
330.164
340.222
350.607
360.113
370.462
380.694
390.934
40.269
400.00964
410.197
420.978
430.407
440.063
450.191
460.468
470.403
480.424
490.213
50.235
500.906
510.593
520.318
530.0743
540.419
550.0375
560.977
570.538
580.945
590.904
60.956
600.497
610.0817
620.737
630.678
640.807
650.497
660.489
670.218
680.561
690.894
70.0112
700.252
710.0641
720.936
730.372
740.0698
750.188
760.25
770.759
780.315
790.552
80.118
800.0785
810.243
820.0469
830.751
840.274
850.0366
860.665
870.00414
880.82
890.764
90.54
900.0107
910.0451
920.118
930.234
940.328
950.0118
960.366
970.793
980.869
990.613



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13496


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001737 (larynx)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000072 (segment of respiratory tract)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0001004 (respiratory system)
0001557 (upper respiratory tract)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000632 (group A streptococci treatment sample)
0104978 (HEp-2 cell sample)
0000638 (Streptococcus strain 5448 treatment sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0011133 (human Hep-2 cells treated with Streptococci strain 5448 sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)

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