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(Created page with "{{f5samples |id=FF:12642-134G5 |name=Aortic smooth muscle cell response to FGF2, 00hr00min, biol_rep1 (LK1) |sample_id=12642 |rna_tube_id= |rna_box=134 |rna_position=G5 ...")
 
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{{f5samples
 
{{f5samples
 
|id=FF:12642-134G5
 
|id=FF:12642-134G5
|name=Aortic smooth muscle cell response to FGF2, 00hr00min, biol_rep1 (LK1)
+
|name=Aortic smooth muscle cell response to FGF2, 00hr00min, biol rep1 (LK1)
|sample_id=12642
+
|sample_id=10262
|rna_tube_id=
+
|rna_tube_id=104D1
 
|rna_box=134
 
|rna_box=134
|rna_position=G5
+
|disease=
|sample_cell_lot=
 
|sample_cell_catalog=
 
|sample_company=
 
|rna_lot_number=
 
|rna_catalog_number=
 
|sample_species=Human (Homo sapiens)
 
|sample_strain=
 
|sample_dev_stage=
 
|sample_tissue=aorta
 
|sample_donor(cell lot)=rep1
 
|sample_sex=
 
 
|sample_age=
 
|sample_age=
|sample_ethnicity=
+
|tag=[[propx::999]]
|rna_rin=
+
|ancestors_in_cell_lineage_facet=CL:0000003
|rna_od260/230=
+
|ancestors_in_disease_facet=UBERON:0000465
|rna_od260/280=2.07925
+
|profile_hcage=CNhs13211,LSID000,release010,COMPLETED
|sample_cell_type=smooth muscle cell, vascular associated
+
|sample_description=Test discription
|sample_cell_line=
+
|genmebroswer_013_bw=<ucscbwu013>Human,11844,10717,109I6</ucscbwu013>
|sample_collaboration=Levon Khachigian (University of New South Wales)
 
|sample_experimental_condition=Aortic smooth muscle cell response to fibroblast growth factor 2
 
|sample_disease=
 
|rna_sample_type=
 
|rna_extraction_protocol=
 
|rna_weight_ug=4.94280
 
|rna_concentration=0.16476
 
|sample_note=
 
|profile_hcage=CNhs13339,LSID1022,,LIBRARY SCHEDULED
 
|profile_cagescan=,,,
 
|profile_srnaseq=,,,
 
|profile_rnaseq=,,,
 
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000056,CL:0000144,CL:0000183,CL:0000187,CL:0000192,CL:0000211,CL:0000220,CL:0000222,CL:0000255,CL:0000355,CL:0000359,CL:0000393,CL:0000514,CL:0000548,CL:0000680,CL:0000723,CL:0002321,CL:0002371,CL:0002539
 
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000055,UBERON:0000061,UBERON:0000119,UBERON:0000383,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000486,UBERON:0000490,UBERON:0000914,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000947,UBERON:0001009,UBERON:0001015,UBERON:0001062,UBERON:0001134,UBERON:0001135,UBERON:0001637,UBERON:0001981,UBERON:0002036,UBERON:0002049,UBERON:0002050,UBERON:0002111,UBERON:0002204,UBERON:0002329,UBERON:0002385,UBERON:0002532,UBERON:0003059,UBERON:0003077,UBERON:0003081,UBERON:0003082,UBERON:0003104,UBERON:0003509,UBERON:0003914,UBERON:0004111,UBERON:0004120,UBERON:0004178,UBERON:0004237,UBERON:0004290,UBERON:0004535,UBERON:0004537,UBERON:0004571,UBERON:0004572,UBERON:0004573,UBERON:0004695,UBERON:0004872,UBERON:0005291,UBERON:0005423,UBERON:0006965,UBERON:0007500,UBERON:0007798,UBERON:0009142
 
|ancestors_in_disease_facet=
 
|sample_description=
 
  
 
|fonse_cell_line=
 
|fonse_cell_line=

Revision as of 05:30, 27 January 2012


Name:Aortic smooth muscle cell response to FGF2, 00hr00min, biol rep1 (LK1)
Species:{{{sample_species}}}
Library ID:{{{library_id}}}
Sample type:{{{sample_category}}}
Additional information
Sample information
strain{{{sample_strain}}}
tissue{{{sample_tissue}}}
dev stage{{{sample_dev_stage}}}
sex{{{sample_sex}}}
ageNA
cell type{{{sample_cell_type}}}
cell line{{{sample_cell_line}}}
company{{{sample_company}}}
collaboration{{{sample_collaboration}}}
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number{{{rna_lot_number}}}
catalog number{{{rna_catalog_number}}}
sample type{{{rna_sample_type}}}
extraction protocol (Details){{{rna_extraction_protocol}}}



FANTOM5 (FF) ontology


Direct parent terms

is_a relathionship
{{{is_a}}}

part_of relathionship
{{{part_of}}}

has_quality relathionship
{{{has_quality}}}

Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000003 (native cell)

DOID: Disease
0000465 (material anatomical entity)

UBERON: Anatomy
NA

FF: FANTOM5
NA

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA