Difference between revisions of "FFCP PHASE1:Hg19::chr11:61124250..61124257,-"
From FANTOM5_SSTAR
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|ontology_enrichment_celltype_v019=CL:0000236;5.97e-80;13!CL:0000945;9.45e-51;24!CL:0000784;1.91e-27;3!CL:0000542;2.38e-19;53!CL:0000451;6.99e-08;10 | |ontology_enrichment_celltype_v019=CL:0000236;5.97e-80;13!CL:0000945;9.45e-51;24!CL:0000784;1.91e-27;3!CL:0000542;2.38e-19;53!CL:0000451;6.99e-08;10 | ||
+ | |ontology_enrichment_celltype_v019_2=CL:0000236,3.82e-74,14;CL:0000945,9.25e-51,24;CL:0000826,9.25e-51,24;CL:0000784,1.75e-27,3;CL:0000542,9.04e-26,53;CL:0000051,9.04e-26,53;CL:0000838,2.12e-22,52;CL:0000738,1.10e-15,136;CL:0002087,1.84e-14,115;CL:0000037,3.68e-12,168;CL:0002031,7.13e-12,120;CL:0000988,2.13e-11,177;CL:0002032,1.29e-09,161;CL:0000837,1.29e-09,161;CL:0000451,6.83e-08,10 | ||
|ontology_enrichment_development_v019=CL:0000051;2.38e-19;53!UBERON:0001045;9.82e-10;1 | |ontology_enrichment_development_v019=CL:0000051;2.38e-19;53!UBERON:0001045;9.82e-10;1 | ||
|ontology_enrichment_disease=DOID:0060058!2.61e-09!10 | |ontology_enrichment_disease=DOID:0060058!2.61e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:12603;9.82e-10;1 | |ontology_enrichment_disease_v019=DOID:12603;9.82e-10;1 | ||
+ | |ontology_enrichment_disease_v019_2=DOID:12603,9.82e-10,1 | ||
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|ontology_enrichment_uberon_v019=UBERON:0002372;6.61e-10;1!UBERON:0001961;6.61e-10;1!UBERON:0001744;6.61e-10;1!UBERON:0001042;6.61e-10;1!UBERON:0001735;6.61e-10;1!UBERON:0001154;9.82e-10;1!UBERON:0001153;9.82e-10;1!UBERON:0009854;9.82e-10;1 | |ontology_enrichment_uberon_v019=UBERON:0002372;6.61e-10;1!UBERON:0001961;6.61e-10;1!UBERON:0001744;6.61e-10;1!UBERON:0001042;6.61e-10;1!UBERON:0001735;6.61e-10;1!UBERON:0001154;9.82e-10;1!UBERON:0001153;9.82e-10;1!UBERON:0009854;9.82e-10;1 | ||
+ | |ontology_enrichment_uberon_v019_2=UBERON:0002372,7.55e-10,1;UBERON:0001961,7.55e-10,1;UBERON:0001744,7.55e-10,1;UBERON:0001735,7.55e-10,1;UBERON:0001154,1.17e-09,1;UBERON:0001153,1.17e-09,1;UBERON:0001045,1.17e-09,1 | ||
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| ||
|short_description=p11@CYBASC3 | |short_description=p11@CYBASC3 | ||
}} | }} |
Revision as of 00:51, 21 November 2012
Short description: | p11@CYBASC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_CYBASC3_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 15bp_to_ENST00000539890_5end |
EntrezGene: | CYBASC3 |
HGNC: | 23014 |
UniProt: | F5H832 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.82e-74 | 14 |
lymphocyte of B lineage | 9.25e-51 | 24 |
pro-B cell | 9.25e-51 | 24 |
plasmacytoid dendritic cell | 1.75e-27 | 3 |
lymphocyte | 9.04e-26 | 53 |
common lymphoid progenitor | 9.04e-26 | 53 |
lymphoid lineage restricted progenitor cell | 2.12e-22 | 52 |
leukocyte | 1.10e-15 | 136 |
nongranular leukocyte | 1.84e-14 | 115 |
hematopoietic stem cell | 3.68e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 7.13e-12 | 120 |
hematopoietic cell | 2.13e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.29e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-09 | 161 |
dendritic cell | 6.83e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
tonsil | 7.55e-10 | 1 |
mucosa-associated lymphoid tissue | 7.55e-10 | 1 |
lymphoid tissue | 7.55e-10 | 1 |
tonsillar ring | 7.55e-10 | 1 |
vermiform appendix | 1.17e-09 | 1 |
caecum | 1.17e-09 | 1 |
midgut | 1.17e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 9.82e-10 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.