FFCP PHASE1:Hg19::chr16:89971202..89971207,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:89971202..89971207,+ | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_at_chr16:89971202..89971207,+ | |description=CAGE_peak_at_chr16:89971202..89971207,+ | ||
|id=chr16:89971202..89971207,+ | |id=chr16:89971202..89971207,+ | ||
|ontology_enrichment_celltype=CL:0000349!1.23e-14!3;CL:0002577!1.23e-14!3;CL:0000322!3.87e-14!3;CL:0000039!1.74e-13!7;CL:0000586!1.74e-13!7;CL:0002202!1.34e-10!9;CL:0002632!1.34e-10!9;CL:0002368!1.72e-07!13 | |ontology_enrichment_celltype=CL:0000349!1.23e-14!3;CL:0002577!1.23e-14!3;CL:0000322!3.87e-14!3;CL:0000039!1.74e-13!7;CL:0000586!1.74e-13!7;CL:0002202!1.34e-10!9;CL:0002632!1.34e-10!9;CL:0002368!1.72e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.03e-17;3!CL:0000307;1.03e-17;3!CL:0000083;9.39e-14;4!CL:0000039;1.96e-08;7!CL:0000586;1.96e-08;7!CL:0002202;8.61e-07;9!CL:0002632;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,9.46e-18,3;CL:0000068,1.12e-17,3;CL:0000069,1.12e-17,3;CL:0000307,1.12e-17,3;CL:0000377,1.12e-17,3;CL:0000083,1.00e-13,4;CL:0000039,1.89e-08,7;CL:0000586,1.89e-08,7;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.03e-17;3 | |||
|ontology_enrichment_disease=DOID:1799!9.57e-12!1;DOID:10165!9.57e-12!1;DOID:1798!9.57e-12!1 | |ontology_enrichment_disease=DOID:1799!9.57e-12!1;DOID:10165!9.57e-12!1;DOID:1798!9.57e-12!1 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.88e-50;1!DOID:10165;1.88e-50;1!DOID:1798;1.88e-50;1!DOID:1793;9.39e-14;4!DOID:170;1.27e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.42e-50,1;DOID:10165,2.42e-50,1;DOID:1798,2.42e-50,1;DOID:1793,1.00e-13,4;DOID:170,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0003124!1.50e-23!7;UBERON:0001987!1.60e-23!4;UBERON:0004340!1.60e-23!4;UBERON:0005631!4.96e-18!14;UBERON:0000158!4.96e-18!14;UBERON:0004821!3.87e-14!3;UBERON:0003215!3.87e-14!3;UBERON:0002299!3.87e-14!3;UBERON:0006524!3.87e-14!3;UBERON:0008874!3.87e-14!3;UBERON:0002169!3.87e-14!3;UBERON:0004894!3.87e-14!3;UBERON:0002363!6.00e-11!1;UBERON:0007647!6.00e-11!1;UBERON:0010115!6.00e-11!1;UBERON:0000478!1.77e-10!24;UBERON:0005178!3.26e-07!34;UBERON:0002224!3.26e-07!34;UBERON:0005181!5.30e-07!35;UBERON:0007196!5.45e-07!14;UBERON:0001558!5.45e-07!14 | |ontology_enrichment_uberon=UBERON:0003124!1.50e-23!7;UBERON:0001987!1.60e-23!4;UBERON:0004340!1.60e-23!4;UBERON:0005631!4.96e-18!14;UBERON:0000158!4.96e-18!14;UBERON:0004821!3.87e-14!3;UBERON:0003215!3.87e-14!3;UBERON:0002299!3.87e-14!3;UBERON:0006524!3.87e-14!3;UBERON:0008874!3.87e-14!3;UBERON:0002169!3.87e-14!3;UBERON:0004894!3.87e-14!3;UBERON:0002363!6.00e-11!1;UBERON:0007647!6.00e-11!1;UBERON:0010115!6.00e-11!1;UBERON:0000478!1.77e-10!24;UBERON:0005178!3.26e-07!34;UBERON:0002224!3.26e-07!34;UBERON:0005181!5.30e-07!35;UBERON:0007196!5.45e-07!14;UBERON:0001558!5.45e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.21e-13;4!UBERON:0003126;2.26e-08;7!UBERON:0001005;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.13e-13,4;UBERON:0004340,1.13e-13,4;UBERON:0003124,2.18e-08,7;UBERON:0003126,2.35e-08,7;UBERON:0001005,2.35e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22789466143284,0.0897576444097721,0.325942115766024,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14288033377707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22789466143284,0.0897576444097721,0.325942115766024,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14288033377707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:89971202..89971207,+ | |short_description=p@chr16:89971202..89971207,+ | ||
}} | }} |
Latest revision as of 13:33, 25 July 2015
Short description: | p@chr16:89971202..89971207, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:89971202..89971207, + |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 9.46e-18 | 3 |
duct epithelial cell | 1.12e-17 | 3 |
branched duct epithelial cell | 1.12e-17 | 3 |
tracheal epithelial cell | 1.12e-17 | 3 |
tracheoblast | 1.12e-17 | 3 |
epithelial cell of pancreas | 1.00e-13 | 4 |
germ line cell | 1.89e-08 | 7 |
germ cell | 1.89e-08 | 7 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.13e-13 | 4 |
allantois | 1.13e-13 | 4 |
chorion | 2.18e-08 | 7 |
trachea | 2.35e-08 | 7 |
respiratory airway | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.42e-50 | 1 |
endocrine pancreas cancer | 2.42e-50 | 1 |
pancreatic endocrine carcinoma | 2.42e-50 | 1 |
pancreatic cancer | 1.00e-13 | 4 |
endocrine gland cancer | 1.32e-09 | 6 |