FFCP PHASE1:Hg19::chr19:13265070..13265078,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:13265070..13265078,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr19:13265070..13265078,- | |description=CAGE_peak_at_chr19:13265070..13265078,- | ||
|id=chr19:13265070..13265078,- | |id=chr19:13265070..13265078,- | ||
|ontology_enrichment_celltype=CL:0002057!3.57e-21!42;CL:0000860!1.13e-20!45;CL:0000766!4.24e-19!76;CL:0000738!6.39e-16!140;CL:0000557!1.89e-15!71;CL:0002009!7.22e-14!65;CL:0000839!2.89e-13!70;CL:0000763!3.60e-12!112;CL:0000049!3.60e-12!112;CL:0002194!4.85e-12!63;CL:0000576!4.85e-12!63;CL:0000040!4.85e-12!63;CL:0000559!4.85e-12!63;CL:0002031!9.39e-12!124;CL:0000037!4.65e-11!172;CL:0000566!4.65e-11!172;CL:0002032!1.12e-10!165;CL:0000837!1.12e-10!165;CL:0000988!2.10e-10!182;CL:0002087!4.11e-10!119;CL:0002393!3.09e-08!9;CL:0002397!3.09e-08!9;CL:0000094!3.58e-08!8;CL:0000081!1.38e-07!11;CL:0000775!7.66e-07!3 | |ontology_enrichment_celltype=CL:0002057!3.57e-21!42;CL:0000860!1.13e-20!45;CL:0000766!4.24e-19!76;CL:0000738!6.39e-16!140;CL:0000557!1.89e-15!71;CL:0002009!7.22e-14!65;CL:0000839!2.89e-13!70;CL:0000763!3.60e-12!112;CL:0000049!3.60e-12!112;CL:0002194!4.85e-12!63;CL:0000576!4.85e-12!63;CL:0000040!4.85e-12!63;CL:0000559!4.85e-12!63;CL:0002031!9.39e-12!124;CL:0000037!4.65e-11!172;CL:0000566!4.65e-11!172;CL:0002032!1.12e-10!165;CL:0000837!1.12e-10!165;CL:0000988!2.10e-10!182;CL:0002087!4.11e-10!119;CL:0002393!3.09e-08!9;CL:0002397!3.09e-08!9;CL:0000094!3.58e-08!8;CL:0000081!1.38e-07!11;CL:0000775!7.66e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;8.08e-57;8!CL:0000775;2.40e-55;3!CL:0000081;2.00e-41;11!CL:0000771;3.94e-37;2!CL:0001014;2.27e-10;2!CL:0001016;2.27e-10;2!CL:0002541;2.97e-07;3!CL:0000346;2.97e-07;3!CL:1000428;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,8.09e-57,8;CL:0000775,2.40e-55,3;CL:0000081,2.00e-41,11;CL:0000771,3.94e-37,2;CL:0000766,7.04e-12,72;CL:0001014,2.27e-10,2;CL:0001016,2.27e-10,2;CL:0000763,3.44e-10,108;CL:0000049,3.44e-10,108;CL:0000738,5.40e-08,136;CL:0000346,2.79e-07,3;CL:1000428,2.79e-07,3;CL:0002541,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.96e-16!102;UBERON:0003061!3.96e-16!102;UBERON:0002193!1.78e-14!112;UBERON:0002371!1.03e-13!80;UBERON:0001474!4.26e-12!86;UBERON:0004765!1.14e-09!101;UBERON:0001434!1.14e-09!101;UBERON:0002405!5.62e-08!115;UBERON:0003081!5.18e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!3.96e-16!102;UBERON:0003061!3.96e-16!102;UBERON:0002193!1.78e-14!112;UBERON:0002371!1.03e-13!80;UBERON:0001474!4.26e-12!86;UBERON:0004765!1.14e-09!101;UBERON:0001434!1.14e-09!101;UBERON:0002405!5.62e-08!115;UBERON:0003081!5.18e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.97e-07;3!UBERON:0003124;2.97e-07;3!UBERON:0000920;2.97e-07;3!UBERON:0001992;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.79e-07,3;UBERON:0001992,2.79e-07,3;UBERON:0000920,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0,0,1.53041946185451,0,0.639337125799041,0,0,0.426224750532694,0.870627715885752,0.56738522469114,1.24564449799115,0,0,0.434377689410233,0,0.736555271975129,0.949387162322653,0,0.425208599930087,0.209658645508376,0.22465726229299,0.750884464207532,0.64290234678832,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0.721879481669586,0,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.646882724578552,0.513372145118994,0,0,0,0,0.637938751653163,5.99205619157746,5.9832291840805,6.21623270154053,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,1.29694662238543,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,2.32140586367385,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0.617602894321944,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0,0,1.53041946185451,0,0.639337125799041,0,0,0.426224750532694,0.870627715885752,0.56738522469114,1.24564449799115,0,0,0.434377689410233,0,0.736555271975129,0.949387162322653,0,0.425208599930087,0.209658645508376,0.22465726229299,0.750884464207532,0.64290234678832,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0.721879481669586,0,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.646882724578552,0.513372145118994,0,0,0,0,0.637938751653163,5.99205619157746,5.9832291840805,6.21623270154053,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,1.29694662238543,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,2.32140586367385,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0.617602894321944,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr19:13265070..13265078,- | |short_description=p@chr19:13265070..13265078,- | ||
}} | }} |
Latest revision as of 04:04, 26 July 2015
Short description: | p@chr19:13265070..13265078, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13265070..13265078, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 8.09e-57 | 8 |
neutrophil | 2.40e-55 | 3 |
blood cell | 2.00e-41 | 11 |
eosinophil | 3.94e-37 | 2 |
myeloid leukocyte | 7.04e-12 | 72 |
CD1a-positive Langerhans cell | 2.27e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.27e-10 | 2 |
myeloid cell | 3.44e-10 | 108 |
common myeloid progenitor | 3.44e-10 | 108 |
leukocyte | 5.40e-08 | 136 |
hair follicle dermal papilla cell | 2.79e-07 | 3 |
stem cell of epidermis | 2.79e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.79e-07 | 3 |
papillary layer of dermis | 2.79e-07 | 3 |
egg chorion | 3.35e-07 | 3 |