Difference between revisions of "FFCP PHASE1:Hg19::chr19:52193675..52193684,-"
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{{FFCP | {{FFCP | ||
+ | |DHSsupport=supported | ||
+ | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
+ | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
+ | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
+ | |cluster_id=chr19:52193675..52193684,- | ||
|description=CAGE_peak_at_chr19:52193675..52193684,- | |description=CAGE_peak_at_chr19:52193675..52193684,- | ||
|id=chr19:52193675..52193684,- | |id=chr19:52193675..52193684,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
+ | |ontology_enrichment_celltype_v019=CL:0000097;3.05e-36;5!CL:0000163;1.67e-20;9!CL:0000771;1.92e-11;2!CL:0000094;4.77e-11;8!CL:0000081;2.76e-08;11!CL:0000775;5.18e-08;3!CL:0000346;6.78e-08;3!CL:1000428;6.78e-08;3 | ||
+ | |ontology_enrichment_celltype_v019_2=CL:0000097,4.13e-36,5;CL:0002028,4.13e-36,5;CL:0000163,1.98e-20,9;CL:0000771,1.82e-11,2;CL:0000094,4.66e-11,8;CL:0000081,2.72e-08,11;CL:0000775,5.18e-08,3;CL:0000346,7.26e-08,3;CL:1000428,7.26e-08,3;CL:0000766,6.15e-07,72 | ||
+ | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
+ | |ontology_enrichment_disease_v019=DOID:5093;1.15e-20;4!DOID:1612;1.15e-20;4 | ||
+ | |ontology_enrichment_disease_v019_2=DOID:5093,7.00e-21,4;DOID:1612,7.00e-21,4 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
+ | |ontology_enrichment_uberon_v019=UBERON:0000310;7.36e-09;10!UBERON:0001443;3.89e-08;11!UBERON:0000412;6.78e-08;3!UBERON:0001992;6.78e-08;3 | ||
+ | |ontology_enrichment_uberon_v019_2=UBERON:0000310,6.04e-09,10;UBERON:0001443,3.25e-08,11;UBERON:0000412,7.26e-08,3;UBERON:0001992,7.26e-08,3 | ||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0.739508020333575,0,0,0.587200878669695,0,0.401088894940283,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0.449446968890169,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,3.9534125230819,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,1.03664057770386,3.89123874225796,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0,0,2.24702107184155,0,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0,0,0.442317039724898,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0.251567901752575,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0.227662191351298,0,0.115233987555779,0.171488009437418,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0.739508020333575,0,0,0.587200878669695,0,0.401088894940283,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0.449446968890169,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,3.9534125230819,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,1.03664057770386,3.89123874225796,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0,0,2.24702107184155,0,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0,0,0.442317039724898,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0.251567901752575,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0.227662191351298,0,0.115233987555779,0.171488009437418,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:52193675..52193684,- | |short_description=p@chr19:52193675..52193684,- | ||
}} | }} |
Latest revision as of 07:45, 27 July 2015
Short description: | p@chr19:52193675..52193684, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:52193675..52193684, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.13e-36 | 5 |
basophil mast progenitor cell | 4.13e-36 | 5 |
endocrine cell | 1.98e-20 | 9 |
eosinophil | 1.82e-11 | 2 |
granulocyte | 4.66e-11 | 8 |
blood cell | 2.72e-08 | 11 |
neutrophil | 5.18e-08 | 3 |
hair follicle dermal papilla cell | 7.26e-08 | 3 |
stem cell of epidermis | 7.26e-08 | 3 |
myeloid leukocyte | 6.15e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
breast | 6.04e-09 | 10 |
chest | 3.25e-08 | 11 |
dermal papilla | 7.26e-08 | 3 |
papillary layer of dermis | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.00e-21 | 4 |
breast cancer | 7.00e-21 | 4 |