FFCP PHASE1:Hg19::chr1:145114240..145114255,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:145114240..145114255,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr1:145114240..145114255,+ | |description=CAGE_peak_at_chr1:145114240..145114255,+ | ||
|id=chr1:145114240..145114255,+ | |id=chr1:145114240..145114255,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.05e-31!42;CL:0000860!1.70e-28!45;CL:0002194!3.07e-20!63;CL:0000576!3.07e-20!63;CL:0000040!3.07e-20!63;CL:0000559!3.07e-20!63;CL:0002009!1.90e-19!65;CL:0000839!1.15e-17!70;CL:0000557!2.43e-17!71;CL:0000766!7.72e-16!76;CL:0002087!3.65e-11!119;CL:0000763!4.93e-09!112;CL:0000049!4.93e-09!112;CL:0000134!1.28e-08!358;CL:0000738!1.34e-08!140;CL:0002031!1.56e-08!124;CL:0000048!2.53e-08!430;CL:0002320!2.96e-08!365;CL:0000723!4.75e-08!436;CL:0000034!1.07e-07!444;CL:0000219!1.55e-07!390 | |ontology_enrichment_celltype=CL:0002057!6.05e-31!42;CL:0000860!1.70e-28!45;CL:0002194!3.07e-20!63;CL:0000576!3.07e-20!63;CL:0000040!3.07e-20!63;CL:0000559!3.07e-20!63;CL:0002009!1.90e-19!65;CL:0000839!1.15e-17!70;CL:0000557!2.43e-17!71;CL:0000766!7.72e-16!76;CL:0002087!3.65e-11!119;CL:0000763!4.93e-09!112;CL:0000049!4.93e-09!112;CL:0000134!1.28e-08!358;CL:0000738!1.34e-08!140;CL:0002031!1.56e-08!124;CL:0000048!2.53e-08!430;CL:0002320!2.96e-08!365;CL:0000723!4.75e-08!436;CL:0000034!1.07e-07!444;CL:0000219!1.55e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-37;33!CL:0002057;1.19e-37;33!CL:0000473;1.60e-27;39!CL:0000234;1.60e-27;39!CL:0000576;4.90e-17;48!CL:0000766;2.95e-13;69!CL:0002087;3.74e-09;104!CL:0000763;2.15e-08;100!CL:0000346;3.25e-07;3!CL:1000428;3.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.97e-34,42;CL:0002057,2.97e-34,42;CL:0000473,6.30e-30,48;CL:0000234,6.30e-30,48;CL:0002194,7.34e-24,59;CL:0000576,7.34e-24,59;CL:0000040,7.34e-24,59;CL:0000559,7.34e-24,59;CL:0002009,4.46e-23,61;CL:0000839,2.54e-21,66;CL:0000557,5.32e-21,67;CL:0000766,1.57e-19,72;CL:0000763,6.65e-13,108;CL:0000049,6.65e-13,108;CL:0002087,4.34e-12,115;CL:0002031,1.45e-11,120;CL:0000738,3.86e-10,136;CL:0002032,1.80e-08,161;CL:0000837,1.80e-08,161;CL:0000037,4.31e-08,168;CL:0000988,1.20e-07,177;CL:0000346,3.16e-07,3;CL:1000428,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.14e-21;42 | |||
|ontology_enrichment_disease=DOID:2394!9.64e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.97e-15!80;UBERON:0001474!2.30e-13!86;UBERON:0002390!8.65e-13!102;UBERON:0003061!8.65e-13!102;UBERON:0002193!2.56e-12!112;UBERON:0004765!8.92e-12!101;UBERON:0001434!8.92e-12!101;UBERON:0002405!1.09e-09!115;UBERON:0002204!7.67e-08!167;UBERON:0002384!9.28e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.25e-07;3!UBERON:0001992;3.25e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-18,76;UBERON:0001474,4.07e-17,82;UBERON:0004765,1.45e-15,90;UBERON:0002405,4.72e-15,93;UBERON:0002390,2.90e-14,98;UBERON:0003061,2.90e-14,98;UBERON:0001434,5.70e-14,100;UBERON:0002193,6.65e-13,108;UBERON:0002204,3.82e-08,167;UBERON:0000412,3.16e-07,3;UBERON:0001992,3.16e-07,3 | |||
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| ||
|short_description=p@chr1:145114240..145114255,+ | |short_description=p@chr1:145114240..145114255,+ | ||
}} | }} |
Latest revision as of 20:44, 27 July 2015
Short description: | p@chr1:145114240..145114255, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:145114240..145114255, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.97e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.97e-34 | 42 |
defensive cell | 6.30e-30 | 48 |
phagocyte | 6.30e-30 | 48 |
monopoietic cell | 7.34e-24 | 59 |
monocyte | 7.34e-24 | 59 |
monoblast | 7.34e-24 | 59 |
promonocyte | 7.34e-24 | 59 |
macrophage dendritic cell progenitor | 4.46e-23 | 61 |
myeloid lineage restricted progenitor cell | 2.54e-21 | 66 |
granulocyte monocyte progenitor cell | 5.32e-21 | 67 |
myeloid leukocyte | 1.57e-19 | 72 |
myeloid cell | 6.65e-13 | 108 |
common myeloid progenitor | 6.65e-13 | 108 |
nongranular leukocyte | 4.34e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.45e-11 | 120 |
leukocyte | 3.86e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.80e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-08 | 161 |
hematopoietic stem cell | 4.31e-08 | 168 |
hematopoietic cell | 1.20e-07 | 177 |
hair follicle dermal papilla cell | 3.16e-07 | 3 |
stem cell of epidermis | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-18 | 76 |
bone element | 4.07e-17 | 82 |
skeletal element | 1.45e-15 | 90 |
immune system | 4.72e-15 | 93 |
hematopoietic system | 2.90e-14 | 98 |
blood island | 2.90e-14 | 98 |
skeletal system | 5.70e-14 | 100 |
hemolymphoid system | 6.65e-13 | 108 |
musculoskeletal system | 3.82e-08 | 167 |
dermal papilla | 3.16e-07 | 3 |
papillary layer of dermis | 3.16e-07 | 3 |