FFCP PHASE1:Hg19::chr1:153530641..153530645,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:153530641..153530645,- | |||
|description=CAGE_peak_at_chr1:153530641..153530645,- | |description=CAGE_peak_at_chr1:153530641..153530645,- | ||
|id=chr1:153530641..153530645,- | |id=chr1:153530641..153530645,- | ||
|ontology_enrichment_celltype=CL:0002076!2.68e-23!43;CL:0000066!8.29e-19!254;CL:0000223!3.08e-18!59;CL:0002251!1.48e-13!21;CL:0002368!4.36e-11!13;CL:0000076!3.85e-10!62;CL:0002621!2.34e-07!3 | |ontology_enrichment_celltype=CL:0002076!2.68e-23!43;CL:0000066!8.29e-19!254;CL:0000223!3.08e-18!59;CL:0002251!1.48e-13!21;CL:0002368!4.36e-11!13;CL:0000076!3.85e-10!62;CL:0002621!2.34e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000622;4.12e-13;5!CL:0000154;4.37e-11;6!CL:0002076;4.06e-09;42!CL:0000317;6.42e-09;2!CL:1000448;6.42e-09;2!CL:0002308;6.42e-09;2!CL:0002140;6.42e-09;2!CL:0000076;3.05e-08;63!CL:0000150;1.09e-07;9!CL:0002251;1.68e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,5.75e-15,63;CL:0000622,5.60e-13,5;CL:0000154,5.64e-11,6;CL:0002076,3.61e-09,42;CL:0000317,6.94e-09,2;CL:1000448,6.94e-09,2;CL:0002308,6.94e-09,2;CL:0002140,6.94e-09,2;CL:0000150,1.29e-07,9;CL:0002251,1.70e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!8.48e-32!14;DOID:305!2.14e-16!106;DOID:0050687!2.65e-12!143;DOID:162!2.40e-07!235;DOID:14566!5.51e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.94e-53;14!DOID:3151;1.65e-16;1!DOID:3149;1.65e-16;1!DOID:3451;6.42e-09;2!DOID:4159;6.42e-09;2!DOID:0060122;6.42e-09;2!DOID:3910;6.42e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.21e-53,14;DOID:3151,1.65e-16,1;DOID:3149,1.65e-16,1;DOID:3910,5.49e-09,2;DOID:3451,6.42e-09,2;DOID:4159,6.42e-09,2;DOID:0060122,6.42e-09,2;DOID:305,1.22e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000166!1.89e-13!21;UBERON:0000161!4.66e-13!35;UBERON:0000165!6.59e-13!28;UBERON:0000930!6.59e-13!28;UBERON:0004119!8.29e-13!169;UBERON:0000925!8.29e-13!169;UBERON:0006595!8.29e-13!169;UBERON:0003729!1.29e-12!5;UBERON:0001004!4.39e-12!72;UBERON:0000344!1.41e-11!12;UBERON:0003343!1.68e-10!4;UBERON:0004785!1.68e-10!4;UBERON:0001007!9.80e-09!155;UBERON:0001555!9.80e-09!155;UBERON:0007026!9.80e-09!155;UBERON:0001723!1.43e-07!3;UBERON:0001033!1.43e-07!3;UBERON:0010056!1.43e-07!3;UBERON:0001949!2.34e-07!3;UBERON:0000065!4.20e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;1.65e-16;1!UBERON:0005056;1.65e-16;1!UBERON:0004176;1.65e-16;1!UBERON:0003343;2.17e-16;4!UBERON:0004785;2.17e-16;4!UBERON:0000974;2.98e-11;6!UBERON:0002419;6.42e-09;2!UBERON:0004903;6.42e-09;2!UBERON:0007771;6.42e-09;2!UBERON:0003297;6.42e-09;2!UBERON:0001821;6.42e-09;2!UBERON:0003487;6.42e-09;2!UBERON:0001820;6.42e-09;2!UBERON:0002173;6.42e-09;2!UBERON:0002186;6.42e-09;2!UBERON:0000161;7.19e-08;19!UBERON:0000166;7.19e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,1.04e-16,1;UBERON:0005056,1.04e-16,1;UBERON:0003343,1.66e-16,4;UBERON:0004785,1.66e-16,4;UBERON:0004903,5.49e-09,2;UBERON:0002173,5.49e-09,2;UBERON:0002186,5.49e-09,2;UBERON:0002419,6.94e-09,2;UBERON:0007771,6.94e-09,2;UBERON:0003297,6.94e-09,2;UBERON:0001821,6.94e-09,2;UBERON:0003487,6.94e-09,2;UBERON:0001820,6.94e-09,2;UBERON:0005089,6.94e-09,2;UBERON:0005088,6.94e-09,2;UBERON:0000974,3.77e-07,10;UBERON:0000166,7.32e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0.512321413058201,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0.358234090811393,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.960950336825531,2.29702882490251,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.865999014529609,0.670302275535787,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0.422250816255987,0,0,0,0.102268682502155,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,2.27586896570999,1.77977555204936,0,0.689486746482929,0,0,0,0.120596438625408,0,0,0,0,0,1.11538995422883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,1.95984794828755,0.69647365264322,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0.707082103850386,0,0.209205692624666,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0.0788057072991982,0,0.105600336519406,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,1.96295437002051,0.707818340086442,3.11828617486854,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,1.03608082081518,0.51215543128185,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,1.60698544745092,1.05868461514708,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0.976839223331694,0.533636729388577,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0.512321413058201,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0.358234090811393,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.960950336825531,2.29702882490251,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.865999014529609,0.670302275535787,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0.422250816255987,0,0,0,0.102268682502155,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,2.27586896570999,1.77977555204936,0,0.689486746482929,0,0,0,0.120596438625408,0,0,0,0,0,1.11538995422883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,1.95984794828755,0.69647365264322,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0.707082103850386,0,0.209205692624666,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0.0788057072991982,0,0.105600336519406,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,1.96295437002051,0.707818340086442,3.11828617486854,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,1.03608082081518,0.51215543128185,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,1.60698544745092,1.05868461514708,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0.976839223331694,0.533636729388577,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:153530641..153530645,- | |short_description=p@chr1:153530641..153530645,- | ||
}} | }} |
Latest revision as of 21:44, 27 July 2015
Short description: | p@chr1:153530641..153530645, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:153530641..153530645, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 5.75e-15 | 63 |
acinar cell | 5.60e-13 | 5 |
protein secreting cell | 5.64e-11 | 6 |
endo-epithelial cell | 3.61e-09 | 42 |
sebum secreting cell | 6.94e-09 | 2 |
epithelial cell of sweat gland | 6.94e-09 | 2 |
epithelial cell of skin gland | 6.94e-09 | 2 |
acinar cell of sebaceous gland | 6.94e-09 | 2 |
glandular epithelial cell | 1.29e-07 | 9 |
epithelial cell of alimentary canal | 1.70e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 1.04e-16 | 1 |
external female genitalia | 1.04e-16 | 1 |
mucosa of oral region | 1.66e-16 | 4 |
respiratory system mucosa | 1.66e-16 | 4 |
bronchoalveolar duct junction | 5.49e-09 | 2 |
alveolar duct | 5.49e-09 | 2 |
bronchiole | 5.49e-09 | 2 |
skin gland | 6.94e-09 | 2 |
epidermis gland | 6.94e-09 | 2 |
gland of integumental system | 6.94e-09 | 2 |
sebaceous gland | 6.94e-09 | 2 |
skin sebaceous gland | 6.94e-09 | 2 |
sweat gland | 6.94e-09 | 2 |
sweat gland placode | 6.94e-09 | 2 |
sebaceous gland placode | 6.94e-09 | 2 |
neck | 3.77e-07 | 10 |
oral opening | 7.32e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.21e-53 | 14 |
skin squamous cell carcinoma | 1.65e-16 | 1 |
keratoacanthoma | 1.65e-16 | 1 |
lung adenocarcinoma | 5.49e-09 | 2 |
skin carcinoma | 6.42e-09 | 2 |
skin cancer | 6.42e-09 | 2 |
integumentary system cancer | 6.42e-09 | 2 |
carcinoma | 1.22e-08 | 106 |