FFCP PHASE1:Hg19::chr1:204159492..204159541,-: Difference between revisions
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|id=chr1:204159492..204159541,-
|short_description=p@chr1:204159492..204159541,-
|description=CAGE_peak_at_chr1:204159492..204159541,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:204159492..204159541,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_at_chr1:204159492..204159541,- | |||
|id=chr1:204159492..204159541,- | |||
|ontology_enrichment_celltype=CL:0000864!6.10e-08!1;CL:0000091!6.10e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002536;6.96e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,6.96e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.62e-41;1!UBERON:0007123;3.22e-09;5!UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease=DOID:3112!3.32e-08!1;DOID:3571!6.10e-08!1;DOID:4235!9.72e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3112;2.21e-40;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,2.21e-40,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.53e-11;4!UBERON:0002046;3.22e-09;5!UBERON:0000478;1.27e-07;24!UBERON:0000305;6.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.37e-12,14;UBERON:0000158,2.37e-12,14;UBERON:0001987,2.53e-11,4;UBERON:0004340,2.53e-11,4;UBERON:0002046,3.22e-09,5;UBERON:0004117,3.22e-09,5;UBERON:0007689,3.22e-09,5;UBERON:0007123,3.22e-09,5;UBERON:0003091,3.22e-09,5;UBERON:0000478,1.27e-07,24;UBERON:0003124,5.08e-07,7;UBERON:0000305,6.39e-07,7 | |||
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|short_description=p@chr1:204159492..204159541,- | |||
}} | }} |
Latest revision as of 02:35, 28 July 2015
Short description: | p@chr1:204159492..204159541, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:204159492..204159541, - |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 6.96e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.37e-12 | 14 |
membranous layer | 2.37e-12 | 14 |
placenta | 2.53e-11 | 4 |
allantois | 2.53e-11 | 4 |
thyroid gland | 3.22e-09 | 5 |
pharyngeal pouch | 3.22e-09 | 5 |
thyroid diverticulum | 3.22e-09 | 5 |
pharyngeal pouch 2 | 3.22e-09 | 5 |
thyroid primordium | 3.22e-09 | 5 |
extraembryonic structure | 1.27e-07 | 24 |
chorion | 5.08e-07 | 7 |
amnion | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.21e-40 | 1 |