FFCP PHASE1:Hg19::chr1:207082917..207082938,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:207082917..207082938,- | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_at_chr1:207082917..207082938,- | |description=CAGE_peak_at_chr1:207082917..207082938,- | ||
|id=chr1:207082917..207082938,- | |id=chr1:207082917..207082938,- | ||
|ontology_enrichment_celltype=CL:0002368;6.54e-19;13!CL:0000148;6.88e-17;10!CL:0002077;7.46e-17;34!CL:0002159;1.62e-13;14!CL:0002202;1.35e-12;9!CL:0002632;1.35e-12;9!CL:0000147;1.02e-11;14!CL:0002567;1.70e-11;3!CL:0000307;1.50e-10;3!CL:0002328;2.04e-10;3!CL:0000346;9.88e-10;3!CL:1000428;9.88e-10;3!CL:0002076;2.98e-09;42!CL:0000710;7.61e-08;20!CL:0000317;1.63e-07;2!CL:1000448;1.63e-07;2!CL:0002308;1.63e-07;2!CL:0002140;1.63e-07;2!CL:0000575;2.22e-07;2 | |ontology_enrichment_celltype=CL:0000066!4.23e-19!254;CL:0002368!7.99e-10!13;CL:0002076!1.40e-09!43;CL:0002077!6.16e-09!33 | ||
| | |ontology_enrichment_celltype_v019=CL:0002368;6.54e-19;13!CL:0000148;6.88e-17;10!CL:0002077;7.46e-17;34!CL:0002159;1.62e-13;14!CL:0002202;1.35e-12;9!CL:0002632;1.35e-12;9!CL:0000147;1.02e-11;14!CL:0002567;1.70e-11;3!CL:0000307;1.50e-10;3!CL:0002328;2.04e-10;3!CL:0000346;9.88e-10;3!CL:1000428;9.88e-10;3!CL:0002076;2.98e-09;42!CL:0000710;7.61e-08;20!CL:0000317;1.63e-07;2!CL:1000448;1.63e-07;2!CL:0002308;1.63e-07;2!CL:0002140;1.63e-07;2!CL:0000575;2.22e-07;2 | ||
|ontology_enrichment_disease=DOID:1909;4.92e-07;2 | |ontology_enrichment_celltype_v019_2=CL:0002077,4.85e-19,34;CL:0002368,1.50e-18,13;CL:0000148,6.96e-17,10;CL:0000541,6.96e-17,10;CL:0000066,3.35e-16,253;CL:0002159,9.05e-14,14;CL:0002202,2.26e-12,9;CL:0002632,2.26e-12,9;CL:0002076,1.01e-11,42;CL:0000147,1.03e-11,14;CL:0002567,1.66e-11,3;CL:0000221,1.81e-11,72;CL:0002328,2.26e-10,3;CL:0000068,3.01e-10,3;CL:0000069,3.01e-10,3;CL:0000307,3.01e-10,3;CL:0000377,3.01e-10,3;CL:0000346,8.00e-10,3;CL:1000428,8.00e-10,3;CL:0000223,7.06e-09,58;CL:0000710,7.64e-08,20;CL:0000317,9.24e-08,2;CL:1000448,9.24e-08,2;CL:0002308,9.24e-08,2;CL:0002140,9.24e-08,2;CL:0000575,1.28e-07,2;CL:0000333,3.05e-07,41;CL:0002321,3.57e-07,250 | ||
|ontology_enrichment_uberon=UBERON:0001003;1.57e-15;15!UBERON:0007376;1.57e-15;15!UBERON:0004815;2.04e-10;3!UBERON:0002031;2.04e-10;3!UBERON:0010371;9.62e-10;31!UBERON:0000412;9.88e-10;3!UBERON:0001992;9.88e-10;3!UBERON:0000065;8.85e-09;44!UBERON:0000072;7.01e-08;37!UBERON:0002419;1.63e-07;2!UBERON:0007771;1.63e-07;2!UBERON:0003297;1.63e-07;2!UBERON:0001821;1.63e-07;2!UBERON:0003487;1.63e-07;2!UBERON:0001820;1.63e-07;2!UBERON:0007196;2.86e-07;15!UBERON:0001558;2.86e-07;15 | |ontology_enrichment_development_v019=CL:0000377;1.50e-10;3 | ||
|ontology_enrichment_disease=DOID:0050687!9.67e-14!143;DOID:305!1.62e-11!106;DOID:162!7.51e-08!235;DOID:14566!1.44e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.07e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.98e-17!169;UBERON:0000925!1.98e-17!169;UBERON:0006595!1.98e-17!169;UBERON:0001004!2.80e-14!72;UBERON:0001007!5.96e-14!155;UBERON:0001555!5.96e-14!155;UBERON:0007026!5.96e-14!155;UBERON:0000065!6.31e-11!53;UBERON:0008947!3.04e-09!38;UBERON:0003258!3.04e-09!38;UBERON:0000072!5.21e-09!46;UBERON:0003102!6.94e-09!95;UBERON:0000077!1.33e-08!130;UBERON:0004921!2.24e-08!129;UBERON:0004185!2.24e-08!129;UBERON:0000161!2.85e-08!35;UBERON:0005911!3.66e-08!82;UBERON:0001048!5.51e-08!168;UBERON:0007196!1.36e-07!14;UBERON:0001558!1.36e-07!14;UBERON:0000062!2.49e-07!511;UBERON:0005157!6.95e-07!51;UBERON:0001737!7.02e-07!9;UBERON:0005153!7.45e-07!37;UBERON:0001041!8.56e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.57e-15;15!UBERON:0007376;1.57e-15;15!UBERON:0004815;2.04e-10;3!UBERON:0002031;2.04e-10;3!UBERON:0010371;9.62e-10;31!UBERON:0000412;9.88e-10;3!UBERON:0001992;9.88e-10;3!UBERON:0000065;8.85e-09;44!UBERON:0000072;7.01e-08;37!UBERON:0002419;1.63e-07;2!UBERON:0007771;1.63e-07;2!UBERON:0003297;1.63e-07;2!UBERON:0001821;1.63e-07;2!UBERON:0003487;1.63e-07;2!UBERON:0001820;1.63e-07;2!UBERON:0007196;2.86e-07;15!UBERON:0001558;2.86e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,8.10e-16,15;UBERON:0007376,8.10e-16,15;UBERON:0007383,8.10e-16,15;UBERON:0001004,5.23e-12,74;UBERON:0004815,2.26e-10,3;UBERON:0002031,2.26e-10,3;UBERON:0000412,8.00e-10,3;UBERON:0001992,8.00e-10,3;UBERON:0000065,1.08e-09,54;UBERON:0003102,6.29e-09,99;UBERON:0008947,8.47e-08,38;UBERON:0003258,8.47e-08,38;UBERON:0002419,9.24e-08,2;UBERON:0007771,9.24e-08,2;UBERON:0003297,9.24e-08,2;UBERON:0001821,9.24e-08,2;UBERON:0003487,9.24e-08,2;UBERON:0001820,9.24e-08,2;UBERON:0005089,9.24e-08,2;UBERON:0005088,9.24e-08,2;UBERON:0007196,3.83e-07,15;UBERON:0001558,3.83e-07,15;UBERON:0000072,3.98e-07,47;UBERON:0001048,5.78e-07,160;UBERON:0004119,8.34e-07,160;UBERON:0000925,8.34e-07,160;UBERON:0006595,8.34e-07,160;UBERON:0005085,9.94e-07,31 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,2.75826367343678,2.71085326900425,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0.256160706529101,0,0,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,2.5500670180478,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0.280901613404497,0.204154171254893,0.122834317311768,0.619954687054593,1.18800285728205,0.494533858557114,0.910161361938026,0,0,0,2.21651292387346,0,0,0.300476117813194,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0,0,0,0.508681776931463,0.966304265816484,1.36373060295417,2.29443676311203,0,0,0,0,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0.473227200159376,0.168584690078102,0.241011029883482,0.330881918197182,1.30727666455444,0.474541238222193,0.943819157121151,1.56977172100277,1.15424147083917,0,0,0,0,0,0,0.590789906681404,0,0,0,0.439001141634502,2.24803506515239,3.51851403440708,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6798212819886,1.13420077793909,1.07470227243418,0.871901815541886,2.68367875415648,0,0,0,0,0,12.9535704356025,8.40374536228211,10.5495702489042,8.55362230113526,12.3392991243988,8.10926256178577,15.7204537946818,0,0,0,0,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0.116210378459959,0,0.40101294060657,0.828728900423067,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,3.44559322797703,1.95018073810956,0,0,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,4.03599141466723,1.02090169995667,2.73126008309985,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,3.35151137767894,2.17781969722645,0.0941438007767792,0.86101074534246,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0,0.307160702099232,0,0,0.333926115068718,0.16480387422676,0,0,0,0,0.511343412510774,0,0.311039587661807,1.52776196950456,0.358042349351218,0,0,0,0,0,0,0,2.3438498497671,0.0874599999961957,0,0.455173793141999,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0.41827123283581,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0,0.789168805698781,1.20990716048664,0.30607276163049,0.126373159256976,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0.489961987071888,0.957651272384428,0.34945333648406,0,0.19351266257817,0.803982487948041,0.410577285266046,0,0,0.225980740780532,1.09633539717401,0.596143835108969,0,0.195551382734803,1.36269994427607,0.213452994739353,0.19980960958213,0,0,0,2.88109595976299,0,0.471388069233591,0.135904206073614,0.209205692624666,0.407992870545287,0,0,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0.858452096273142,0.669514372325618,0.0671834724867263,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0,0.105600336519406,0.179287339332845,2.87872795979168,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.511164065356265,0.906496732161005,0.293104467356165,0,0,0,0.513260513652988,0,0,0,0.414239055347196,0,0,0.121792598380896,0.638341257770182,0,0,0.612691153526923,0,0,0,0,0,0.573409195690071,0.776503360757966,0,0,0.124980407962107,1.36484205787483,1.7127920012698,0.470531639396343,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0.477890301491107,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0.909243296012797,0.214821114084977,0.464033759878494,0,0,0,0,0,0.57785949122191,1.28664954824955,0.260994291965212,0,0,0.734210113519403,0,0,0.219284049578707,0.883445729729405,0,0.506827321959218,0,0,0.303859956177382,0,0,0,0,0,0.737318726261158,5.91673945404156,0,0,0,4.54012762853469,0,0.839277046316667,0.622077260032973,0,0,0,0,1.18812770967818,0.212574920101683,0.743614585554013,1.67593475391973,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,1.83428598521679,2.07946199070609,0,0,0,0,0.20170506870352,0,0,1.80149109261106,0.591424344868181,0,0,0,0,0,0,0.496211178389294,1.05522746615772,0.51104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| ||
|short_description=p@chr1:207082917..207082938,- | |short_description=p@chr1:207082917..207082938,- | ||
}} | }} |
Latest revision as of 03:00, 28 July 2015
Short description: | p@chr1:207082917..207082938, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207082917..207082938, - |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelial cell | 4.85e-19 | 34 |
respiratory epithelial cell | 1.50e-18 | 13 |
melanocyte | 6.96e-17 | 10 |
melanoblast | 6.96e-17 | 10 |
epithelial cell | 3.35e-16 | 253 |
general ecto-epithelial cell | 9.05e-14 | 14 |
epithelial cell of tracheobronchial tree | 2.26e-12 | 9 |
epithelial cell of lower respiratory tract | 2.26e-12 | 9 |
endo-epithelial cell | 1.01e-11 | 42 |
pigment cell | 1.03e-11 | 14 |
light melanocyte | 1.66e-11 | 3 |
ectodermal cell | 1.81e-11 | 72 |
bronchial epithelial cell | 2.26e-10 | 3 |
duct epithelial cell | 3.01e-10 | 3 |
branched duct epithelial cell | 3.01e-10 | 3 |
tracheal epithelial cell | 3.01e-10 | 3 |
tracheoblast | 3.01e-10 | 3 |
hair follicle dermal papilla cell | 8.00e-10 | 3 |
stem cell of epidermis | 8.00e-10 | 3 |
endodermal cell | 7.06e-09 | 58 |
neurecto-epithelial cell | 7.64e-08 | 20 |
sebum secreting cell | 9.24e-08 | 2 |
epithelial cell of sweat gland | 9.24e-08 | 2 |
epithelial cell of skin gland | 9.24e-08 | 2 |
acinar cell of sebaceous gland | 9.24e-08 | 2 |
corneal epithelial cell | 1.28e-07 | 2 |
migratory neural crest cell | 3.05e-07 | 41 |
embryonic cell | 3.57e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 8.10e-16 | 15 |
outer epithelium | 8.10e-16 | 15 |
enveloping layer of ectoderm | 8.10e-16 | 15 |
respiratory system | 5.23e-12 | 74 |
lower respiratory tract epithelium | 2.26e-10 | 3 |
epithelium of bronchus | 2.26e-10 | 3 |
dermal papilla | 8.00e-10 | 3 |
papillary layer of dermis | 8.00e-10 | 3 |
respiratory tract | 1.08e-09 | 54 |
surface structure | 6.29e-09 | 99 |
respiratory primordium | 8.47e-08 | 38 |
endoderm of foregut | 8.47e-08 | 38 |
skin gland | 9.24e-08 | 2 |
epidermis gland | 9.24e-08 | 2 |
gland of integumental system | 9.24e-08 | 2 |
sebaceous gland | 9.24e-08 | 2 |
skin sebaceous gland | 9.24e-08 | 2 |
sweat gland | 9.24e-08 | 2 |
sweat gland placode | 9.24e-08 | 2 |
sebaceous gland placode | 9.24e-08 | 2 |
tracheobronchial tree | 3.83e-07 | 15 |
lower respiratory tract | 3.83e-07 | 15 |
segment of respiratory tract | 3.98e-07 | 47 |
primordium | 5.78e-07 | 160 |
endoderm-derived structure | 8.34e-07 | 160 |
endoderm | 8.34e-07 | 160 |
presumptive endoderm | 8.34e-07 | 160 |
ectodermal placode | 9.94e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.07e-07 | 2 |