FFCP PHASE1:Hg19::chr1:64104401..64104429,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:64104401..64104429,+
|short_description=p@chr1:64104401..64104429,+
|description=CAGE_peak_at_chr1:64104401..64104429,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:64104401..64104429,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_at_chr1:64104401..64104429,+ | |||
|id=chr1:64104401..64104429,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.46e-09!10;CL:0000541!1.46e-09!10;CL:0002567!3.70e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.79e-47;10!CL:0000147;1.61e-33;14!CL:0002567;2.95e-30;3!CL:0000710;2.79e-23;20!CL:0000075;4.51e-17;27!CL:0000346;1.81e-13;3!CL:1000428;1.81e-13;3!CL:0002077;6.25e-12;34!CL:0002566;3.24e-11;1!CL:0002559;1.93e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.80e-47,10;CL:0000541,3.80e-47,10;CL:0000147,1.61e-33,14;CL:0002567,2.82e-30,3;CL:0000710,2.80e-23,20;CL:0000075,4.52e-17,27;CL:0000333,4.72e-17,41;CL:0000346,1.41e-13,3;CL:1000428,1.41e-13,3;CL:0002077,2.06e-13,34;CL:0000133,1.17e-11,59;CL:0002566,3.41e-11,1;CL:0000221,2.18e-09,72;CL:0002559,1.66e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000133;7.78e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.44e-20;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.04e-20,2 | |||
|ontology_enrichment_uberon= | |||
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| ||
|short_description=p@chr1:64104401..64104429,+ | |||
}} | }} |
Latest revision as of 09:40, 28 July 2015
Short description: | p@chr1:64104401..64104429, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:64104401..64104429, + |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.80e-47 | 10 |
melanoblast | 3.80e-47 | 10 |
pigment cell | 1.61e-33 | 14 |
light melanocyte | 2.82e-30 | 3 |
neurecto-epithelial cell | 2.80e-23 | 20 |
columnar/cuboidal epithelial cell | 4.52e-17 | 27 |
migratory neural crest cell | 4.72e-17 | 41 |
hair follicle dermal papilla cell | 1.41e-13 | 3 |
stem cell of epidermis | 1.41e-13 | 3 |
ecto-epithelial cell | 2.06e-13 | 34 |
neurectodermal cell | 1.17e-11 | 59 |
dark melanocyte | 3.41e-11 | 1 |
ectodermal cell | 2.18e-09 | 72 |
hair follicle cell | 1.66e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.41e-13 | 3 |
papillary layer of dermis | 1.41e-13 | 3 |
hindlimb bud | 5.57e-11 | 1 |
soleus muscle | 5.57e-11 | 1 |
appendage | 5.57e-11 | 1 |
lower limb segment | 5.57e-11 | 1 |
multi-limb segment region | 5.57e-11 | 1 |
hindlimb muscle | 5.57e-11 | 1 |
hindlimb zeugopod muscle | 5.57e-11 | 1 |
paired limb/fin | 5.57e-11 | 1 |
limb | 5.57e-11 | 1 |
pelvic appendage | 5.57e-11 | 1 |
limb segment | 5.57e-11 | 1 |
paired limb/fin segment | 5.57e-11 | 1 |
limb muscle | 5.57e-11 | 1 |
pelvic complex muscle | 5.57e-11 | 1 |
zeugopod | 5.57e-11 | 1 |
muscle of leg | 5.57e-11 | 1 |
paired limb/fin bud | 5.57e-11 | 1 |
limb bud | 5.57e-11 | 1 |
pelvic appendage bud | 5.57e-11 | 1 |
limb/fin field | 5.57e-11 | 1 |
subdivision of organism along appendicular axis | 5.57e-11 | 1 |
appendage girdle complex | 5.57e-11 | 1 |
leg | 5.57e-11 | 1 |
hindlimb | 5.57e-11 | 1 |
triceps surae | 5.57e-11 | 1 |
hindlimb zeugopod | 5.57e-11 | 1 |
posterior region of body | 5.57e-11 | 1 |
pelvic complex | 5.57e-11 | 1 |
limb field | 5.57e-11 | 1 |
hindlimb/pelvic fin field | 5.57e-11 | 1 |
skin epidermis | 2.22e-10 | 15 |
outer epithelium | 2.22e-10 | 15 |
enveloping layer of ectoderm | 2.22e-10 | 15 |
hair follicle | 1.66e-08 | 5 |
hair follicle placode | 1.66e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.04e-20 | 2 |